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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90440_cuf0 >transcript:BL90440_cuf0-protein ID=transcript:BL90440_cuf0-protein|Name=transcript:BL90440_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=206bp
MELPDAKMSADPVILDHIRNLNKLCRLCGQAALTCNDKRKQLRAHPCLEY
ARAIQQYVGVDVTKDKVYMHPPCFCHRCRVKLYRPPKHYAPKVMTWYEHD
AFASDSCPHCEKVAYISKGGRPVKRKPPGRPMSQVKQEDNGQEENNENTA
EPEEDPLHALLENMDGCRDHGIATKNRFHYCKPVTRQSTRNQLSVLEDHA
YALPQP Run BLAST on NCBI mRNA from alignment at Sc0000013:2979209..2981568+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90440_cuf0 ID=transcript:BL90440_cuf0|Name=transcript:BL90440_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2360bp|location=Sequence derived from alignment at Sc0000013:2979209..2981568+ (Branchiostoma lanceolatum)
CACCAATGAGGGATCCATGAAAAATACTCACAGGAGGGCCACATGGAGTT
GGTGGGATATCCAAAATTCCTCTATCTCTGCCCCTTTTGACTCTAACAAG
CTGCTAATCTTTCAACTACCACCTTCACTTCATTCCTATATTCATGCTTC
TATTCAGTGCATTTCTTTTTTCCATGTATTGTATCATTTTCCTGATTGTT
GCTGACTGAACTTGCCTTCACGTCAGTGTCCTTGTCCCTTCAATGTTGTC
CAGTACTGTTTAAGTACCTCCATGTAGGAAAGGGCCTTGTGGTTTAGGGT
TGTTGACTTAGAATCTATAGGTTCTGGGTTCAAATCCCTAGCTTGAAAAG
GTGACAGTCACCTGTTCTGTCTATCCTTCTACAAATGTGGTAAATCCCAA
TAAACTAAAAAGGATTAGGTAATATTTGCAGGCAGATGCATAATGTATAT
GTATGTATGTATACTGCATTTATATTCTTACTCAAACCAAGGCGGTTAAA
TATATTTAACATCCTTGCTCAAACAAATTCATATATATGGTAACCATTTG
GCTCCTCCAATACTTGCCACATTACAATGTAATCAAACACCACAGGGTGT
CTGCAACACCTCCAGTAACCATGGTGACAGCCGTCTGGTCCAGGTCGTTG
ACTTTATTAGTTTGGAACGGAAGAAGAAAAGATATGCACCAAACAGTTGT
TACTCAAGCAACTGGATATGACTTTTATCCAGCTGCTTGAGTAATTACCT
TCGCCGAGAAGGTTATGCATAGGGTAGCGTTTGTGTGTATGTGTGTGTGT
GTGTGTGTAACTGACCAGCATAACTCCAGAATGCTTCGATGGTTTGTCTT
GATACTTGGTATGTTGGTAGGCCTTGATGAGACCTGAAAATGGTTAGATT
TTGCCCCCCCCCCTGGCGGCTTGTTACGGTACTGCAGCAGAACTTCCTGT
TTTAATATCTCATGTTCTGGACATGCTATGGAACTGATTTTTGCTATTTG
TCATATGTTATTACCTGGATGTCTAACCTTCATGAACAAAACAAGATATG
TTTCCCTTCTGTGAAGGTAAACAAAGTTACATTTTGGAACTCATTATCTT
TCTTTCTTTTCAGCCAGATGCGAAAATGTCAGCTGATCCTGTCATACTAG
ACCACATCAGGAACCTTAACAAACTGTGCAGACTGTGTGGCCAGGCAGCG
TTGACATGTAATGACAAGAGAAAGCAGTTGCGGGCACATCCCTGTCTTGA
ATATGCCAGGGCAATCCAACAGTATGTGGGAGTGGACGTTACTAAAGACA
AGGTCTACATGCACCCTCCCTGTTTCTGTCATCGCTGTCGAGTCAAACTG
TACAGGCCACCAAAACATTACGCCCCAAAGGTGATGACTTGGTACGAACA
CGATGCCTTTGCAAGCGACAGCTGCCCCCACTGCGAAAAAGTTGCATACA
TATCCAAAGGTGGAAGACCTGTCAAGAGGAAACCACCTGGTAGACCAATG
TCACAGGTGAAACAAGAGGATAACGGACAAGAAGAAAATAATGAAAACAC
AGCAGAGCCTGAAGAGGATCCATTACATGCATTGCTGGAAAACATGGATG
GCTGCAGAGACCATGGAATAGCAACAAAAAATAGGTTTCACTATTGCAAG
CCCGTAACCAGACAAAGCACAAGAAACCAGTTGTCAGTATTAGAAGATCA
TGCATATGCACTGCCCCAACCCTGACTTTCTTTCAGACACTGGTACAATA
ATAGAAAGGAACATAGGCAACCTTTCACTTTGTTTTGTATTTTTGTGATA
TTATGTATGTGGGAGAATTACACTCAAGTTTGCAGAGACGATGCTAGCGG
GGTAAACAAGAGAATCTTTTATGAATCTAAGCGATGGCATTATGTGAAGT
CCTTGATTTAAGCAAAATTACCTGGAGAAAAGTGCAGGAACACCACAAAT
TTGAATTTATCCGGTTAAAAATGTGCCCAAGATTAGTGGACAAGGGATTC
ATACTTTATTCGAGGTTTTTCATTTTACGTTTCTGCTCTGCAATTTTGTC
TGTAACTAGCCCTGAATCAGGGGTGCGTACTTTAATCGAGAAAATATGGT
ATAGTCTGTCATTTTTGCGGTGAGTTGGGTAGATCTTAGATAACTTACAT
GCCTTGTTTCTGTGTCATTATGTTACAAGTCACAAATGCCAGGCACTTTG
GTTACTTCTAATACACAAATAATTGTCAAATCATCATAATCCGGATCCGT
GGCACTCAAACGTCTGCCTGCCTTGAATCATCAGCAGAAACAAAGATTAT
TGTAACATTACCAAATATTTACCTTACAAATAATTCTTGTTTCATATCAT
TTGCCATGTC Coding sequence (CDS) from alignment at Sc0000013:2979209..2981568+ >transcript:BL90440_cuf0 ID=transcript:BL90440_cuf0|Name=transcript:BL90440_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1242bp|location=Sequence derived from alignment at Sc0000013:2979209..2981568+ (Branchiostoma lanceolatum)
ATGGAGTTGCCAGATGCGAAAATGTCAGCTGATCCTGTCATACTAGACCA
CATCAGGAACCTTAACAAACTGTGCAGACTGTGTGGCCAGGCAGCGTTGA
CATGTAATGACAAGAGAAAGCAGTTGCGGGCACATCCCTGTCTTGAATAT
GCCAGGGCAATCCAACAGTATGTGGGAGTGGACGTTACTAAAGACAAGGT
CTACATGCACCCTCCCTGTTTCTGTCATCGCTGTCGAGTCAAACTGTACA
GGCCACCAAAACATTACGCCCCAAAGGTGATGACTTGGTACGAACACGAT
GCCTTTGCAAGCGACAGCTGCCCCCACTGCGAAAAAGTTGCATACATATC
CAAAGGTGGAAGACCTGTCAAGAGGAAACCACCTGGTAGACCAATGTCAC
AGGTGAAACAAGAGGATAACGGACAAGAAGAAAATAATGAAAACACAGCA
GAGCCTGAAGAGGATCCATTACATGCATTGCTGGAAAACATGGATGGCTG
CAGAGACCATGGAATAGCAACAAAAAATAGGTTTCACTATTGCAAGCCCG
TAACCAGACAAAGCACAAGAAACCAGTTGTCAGTATTAGAAGATCATGCA
TATGCACTGCCCCAACCCTGAATGGAGTTGCCAGATGCGAAAATGTCAGC
TGATCCTGTCATACTAGACCACATCAGGAACCTTAACAAACTGTGCAGAC
TGTGTGGCCAGGCAGCGTTGACATGTAATGACAAGAGAAAGCAGTTGCGG
GCACATCCCTGTCTTGAATATGCCAGGGCAATCCAACAGTATGTGGGAGT
GGACGTTACTAAAGACAAGGTCTACATGCACCCTCCCTGTTTCTGTCATC
GCTGTCGAGTCAAACTGTACAGGCCACCAAAACATTACGCCCCAAAGGTG
ATGACTTGGTACGAACACGATGCCTTTGCAAGCGACAGCTGCCCCCACTG
CGAAAAAGTTGCATACATATCCAAAGGTGGAAGACCTGTCAAGAGGAAAC
CACCTGGTAGACCAATGTCACAGGTGAAACAAGAGGATAACGGACAAGAA
GAAAATAATGAAAACACAGCAGAGCCTGAAGAGGATCCATTACATGCATT
GCTGGAAAACATGGATGGCTGCAGAGACCATGGAATAGCAACAAAAAATA
GGTTTCACTATTGCAAGCCCGTAACCAGACAAAGCACAAGAAACCAGTTG
TCAGTATTAGAAGATCATGCATATGCACTGCCCCAACCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000013 | genome | Sc0000013:2979209..2981568 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90440_cuf0 |
| Biotype | protein_coding |
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