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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90380_cuf0 >transcript:BL90380_cuf0-protein ID=transcript:BL90380_cuf0-protein|Name=transcript:BL90380_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=293bp
QVDDNIKFTQESCQNNMLPFLDTKTIIEKDGNLQFEVYRKPTHTDQYLAF
DSHHPLEHKLAVIKTLFHRADNVITSDEAKTEEHRHLRVALAKCGYQNWT
FNKALKPSDQSKKTLKCRPLTNRNKANITIPYVQGVSEKLRRIFQNFNIA
TNFKPHSTLRQKLVHPKDRPEKGIKANVIYKLKCEEPNCNNMYIGETSRP
LKERYKEHCRKSANHYSSAIYHHLKHNQGHSFNFESTDILDREERWFERG
IREAIYERMYNPALNRKGGLRVQLSGTWDNALPTTPHPRTSNI Run BLAST on NCBI mRNA from alignment at Sc0000110:615894..617055- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90380_cuf0 ID=transcript:BL90380_cuf0|Name=transcript:BL90380_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1162bp|location=Sequence derived from alignment at Sc0000110:615894..617055- (Branchiostoma lanceolatum)
CAGGTAGATGACAACATCAAGTTCACACAGGAGTCGTGTCAAAACAACAT
GCTCCCCTTCTTAGACACCAAAACCATCATAGAGAAGGATGGCAACCTTC
AGTTCGAAGTGTACAGGAAACCGACCCACACTGATCAATATCTGGCCTTT
GATTCCCATCACCCTTTGGAACACAAACTAGCAGTGATTAAAACTCTCTT
CCATCGAGCAGACAATGTCATTACCTCAGACGAAGCAAAAACAGAAGAAC
ACAGACATCTCCGTGTGGCTCTAGCCAAGTGTGGCTACCAAAATTGGACC
TTCAACAAGGCCCTCAAACCTTCTGACCAGTCTAAGAAAACACTCAAGTG
CAGACCATTGACCAACAGAAACAAGGCCAACATTACCATTCCCTACGTCC
AAGGAGTATCGGAAAAACTCAGACGTATCTTCCAAAACTTCAACATTGCC
ACTAACTTCAAACCTCACTCAACTCTCAGGCAGAAACTAGTCCATCCAAA
AGACAGGCCTGAAAAAGGCATCAAAGCCAATGTCATCTACAAACTGAAAT
GTGAGGAACCGAACTGCAATAACATGTACATTGGGGAGACAAGTCGACCA
CTAAAAGAACGGTACAAGGAACATTGCAGAAAGAGCGCTAACCACTACTC
CTCTGCCATTTACCACCATCTAAAACACAACCAGGGACACTCATTCAATT
TCGAATCCACGGACATCCTAGATCGTGAAGAACGCTGGTTCGAACGGGGA
ATTAGAGAAGCAATATATGAGAGGATGTACAACCCCGCCCTCAACAGGAA
AGGCGGTCTACGCGTTCAACTTTCAGGCACCTGGGATAATGCACTGCCCA
CCACCCCCCACCCCCGGACAAGCAACATTTAGTTACTGTACTAGAACAAC
AGTAGCTAATTGAACTATTGGCATAACTTTGTCTTGAGTTAATCTTCTTT
TTGAAGACTACTTCAAGACATCCTAAATTGTCTTTACCTCATTAACATAT
CTATTCAGAGTTTTGGTATAAAGCTGGTGTTCTCAGTCCTATCGTTAGTC
ACTGACGAAAGACAGTGGATACTGTCTGAAACGTCTGACTGTTTCAAAAT
CTTATCCAGTTGCTTGAGTAATTATTTTTGGCGTATCTTATTACCTGGAT
GTCTAACCTTCA Coding sequence (CDS) from alignment at Sc0000110:615894..617055- >transcript:BL90380_cuf0 ID=transcript:BL90380_cuf0|Name=transcript:BL90380_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=882bp|location=Sequence derived from alignment at Sc0000110:615894..617055- (Branchiostoma lanceolatum)
CAGGTAGATGACAACATCAAGTTCACACAGGAGTCGTGTCAAAACAACAT
GCTCCCCTTCTTAGACACCAAAACCATCATAGAGAAGGATGGCAACCTTC
AGTTCGAAGTGTACAGGAAACCGACCCACACTGATCAATATCTGGCCTTT
GATTCCCATCACCCTTTGGAACACAAACTAGCAGTGATTAAAACTCTCTT
CCATCGAGCAGACAATGTCATTACCTCAGACGAAGCAAAAACAGAAGAAC
ACAGACATCTCCGTGTGGCTCTAGCCAAGTGTGGCTACCAAAATTGGACC
TTCAACAAGGCCCTCAAACCTTCTGACCAGTCTAAGAAAACACTCAAGTG
CAGACCATTGACCAACAGAAACAAGGCCAACATTACCATTCCCTACGTCC
AAGGAGTATCGGAAAAACTCAGACGTATCTTCCAAAACTTCAACATTGCC
ACTAACTTCAAACCTCACTCAACTCTCAGGCAGAAACTAGTCCATCCAAA
AGACAGGCCTGAAAAAGGCATCAAAGCCAATGTCATCTACAAACTGAAAT
GTGAGGAACCGAACTGCAATAACATGTACATTGGGGAGACAAGTCGACCA
CTAAAAGAACGGTACAAGGAACATTGCAGAAAGAGCGCTAACCACTACTC
CTCTGCCATTTACCACCATCTAAAACACAACCAGGGACACTCATTCAATT
TCGAATCCACGGACATCCTAGATCGTGAAGAACGCTGGTTCGAACGGGGA
ATTAGAGAAGCAATATATGAGAGGATGTACAACCCCGCCCTCAACAGGAA
AGGCGGTCTACGCGTTCAACTTTCAGGCACCTGGGATAATGCACTGCCCA
CCACCCCCCACCCCCGGACAAGCAACATTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000110 | genome | Sc0000110:615894..617055 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90380_cuf0 |
| Biotype | protein_coding |
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