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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL90275_cuf1 >transcript:BL90275_cuf1-protein ID=transcript:BL90275_cuf1-protein|Name=transcript:BL90275_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=182bp
MTYYNPDTDLSVIKSQAHLGQGFGHEMKSRKKFKIGKYFYNLIPESPPLL
GKHFRSCAVVGNSGILLDSGCGPQIDSADFVFRSNLAAIEGFENDVGTKS
NFTTMNPSVLKHDYKGFSKNDKLKEKFINRLRLIRDQILHIPAFVSHGSD
QYTQYTNMMIVKRHLPIKLSYAPRNVNAKMTA Run BLAST on NCBI mRNA from alignment at Sc0000008:2517814..2519464- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL90275_cuf1 ID=transcript:BL90275_cuf1|Name=transcript:BL90275_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1651bp|location=Sequence derived from alignment at Sc0000008:2517814..2519464- (Branchiostoma lanceolatum)
GAAAATGATAGATCTATGTTCGCACCTATGCATGAATCAAGAGGTGTTGG
TCATCAAGCTCCTGTAGCTGTAGTGGCCTGTCCTGTGGAAAAATAGCTAG
AACAATTTACTAAGGTTGATGTAGGCTTAGCTTGACTAGCCTCCACCAGG
CCCTCCTACGGGCACATGGATCGTAGAATTCGGCAGAAAAAGAAATAATT
AGCCAGTAGAGTCAGTCCACGGTGAAGATCACATTTCGCCCGCGGAGCCT
GCAAATGAAACCCTGGCATATTTTCTCCCTATAGCCGGCGTAGTTAGTCT
GGTAGAGACTATAGTTTGACGATTTAGCAACTGCTAGTAGCCTACCGTCC
CGTTTAACAATCTGAAGTCTAAAAGGGCAGTTTGTATTGGGTAGTACATG
TGATAGCAGAATGACTTTGTTCTTTGATGAATTCAAACACTTCTTTTTTC
TGTTCTTTATAGAAAATGGGTTATGACGTACTATAACCCCGACACAGACC
TCAGCGTCATTAAGTCTCAAGCACATCTTGGACAAGGATTCGGGCACGAA
ATGAAAAGTAGAAAGAAGTTCAAAATCGGCAAATATTTCTATAACCTAAT
TCCCGAATCACCCCCTCTTCTGGGGAAGCACTTTCGGTCTTGTGCAGTGG
TGGGGAATTCTGGCATTCTCCTAGACAGCGGTTGTGGTCCTCAGATCGAC
TCTGCAGACTTCGTGTTCAGGTCTAACCTGGCTGCTATTGAGGGGTTCGA
GAATGACGTGGGGACAAAATCTAACTTCACCACCATGAATCCTTCTGTTC
TTAAGCATGATTATAAAGGATTCAGTAAAAATGACAAGCTAAAAGAGAAG
TTTATAAACCGACTGCGTCTAATCCGAGACCAGATTCTGCACATTCCTGC
TTTTGTATCGCATGGCAGCGATCAATACACGCAGTATACTAACATGATGA
TAGTAAAACGTCACTTACCAATCAAACTTTCCTACGCACCGAGGAATGTC
AATGCAAAGATGACAGCGTAAGTTTTTGTTTTGTTTTTTGTACATTTGTA
ACAGTGGGGATCAACCTCCACTAACTGACCAGTCTAACTGGTCCGGACCT
TTTAGCCTAGTGGTTAGCGCGTTGATTTCTCAAGCCATGCGGATCGGTAT
TGGCGCAGGTTCTAATCCCGGGAGTGGCGTACTTGCCTCTTTGGGTTTTT
ACAGTGGTTCCCACACCGGGAATCGAACCCGGGCCTTGGCGGTGAGAGCG
CCAAATCCTAACCACTAGACCATACAGTGGTTCCCACACCGGCCCTGTGA
GTAACGATCAGATCACACAGGGATGTCGTACTCGGAGACTCGGACGAGTC
TGGAAAGAAAAGGGGGAGTAGTGTAACAGTGGGGATCAACCTCCACTAAC
TGACCAGACTAACTGGTCCGGACCTTTTAGCCTAGTGGTTAGCGCGTTGA
TTTCTCAAGCCATGCGGATCGGTATTGGCGCAGGTTCTAATCCCGGGAGT
GGCGTACTTGCCTCTTTGGGTTTTTACAGTGNTTACACATTTTAGAATTC
ATTACAGGATAGCATTTACATTCATCATGTGATTGTCAGATACTCACAGC
AAGTTGGTTTCGTTTGATAAACTGAGAATCCTTTCTGGTAATCGCAGTAT
G Coding sequence (CDS) from alignment at Sc0000008:2517814..2519464- >transcript:BL90275_cuf1 ID=transcript:BL90275_cuf1|Name=transcript:BL90275_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=549bp|location=Sequence derived from alignment at Sc0000008:2517814..2519464- (Branchiostoma lanceolatum)
ATGACGTACTATAACCCCGACACAGACCTCAGCGTCATTAAGTCTCAAGC
ACATCTTGGACAAGGATTCGGGCACGAAATGAAAAGTAGAAAGAAGTTCA
AAATCGGCAAATATTTCTATAACCTAATTCCCGAATCACCCCCTCTTCTG
GGGAAGCACTTTCGGTCTTGTGCAGTGGTGGGGAATTCTGGCATTCTCCT
AGACAGCGGTTGTGGTCCTCAGATCGACTCTGCAGACTTCGTGTTCAGGT
CTAACCTGGCTGCTATTGAGGGGTTCGAGAATGACGTGGGGACAAAATCT
AACTTCACCACCATGAATCCTTCTGTTCTTAAGCATGATTATAAAGGATT
CAGTAAAAATGACAAGCTAAAAGAGAAGTTTATAAACCGACTGCGTCTAA
TCCGAGACCAGATTCTGCACATTCCTGCTTTTGTATCGCATGGCAGCGAT
CAATACACGCAGTATACTAACATGATGATAGTAAAACGTCACTTACCAAT
CAAACTTTCCTACGCACCGAGGAATGTCAATGCAAAGATGACAGCGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:2517814..2519464 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL90275_cuf1 |
| Biotype | protein_coding |
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