transcript:BL90255_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL90255_cuf0
Unique Nametranscript:BL90255_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL90255_cuf0

>transcript:BL90255_cuf0-protein ID=transcript:BL90255_cuf0-protein|Name=transcript:BL90255_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=105bp
VSRKEPPLVLGHYAENHYASLDGSSSVPLEVQLGGPELRALYYRACEEGE
TEVFSARFVLFGKFGNGKTNLCNSLLGYNFDPEWKITDSIAIHPCVMTQE
GQWKE
Run BLAST on NCBI

mRNA from alignment at Sc0000053:1463350..1463852-

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL90255_cuf0 ID=transcript:BL90255_cuf0|Name=transcript:BL90255_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=503bp|location=Sequence derived from alignment at Sc0000053:1463350..1463852- (Branchiostoma lanceolatum)
GTAAGCAGGAAAGAACCTCCGCTGGTTCTGGGGCATTATGCCGAGAACCA
CTATGCAAGTCTTGATGGTAAGTTATACTTTTATCTACTAGTATGCAAAA
TGCAAAAAACAGCAGTGTGTTTAGTATACATCGGTCCATACAAATTGCTG
TCGATAGTAATAATAAGACATTTGCTAGCAAATCAGTGAAATTGCATTGG
TGATTGTTACTCATCATCGGCATTCTTGATGACATTTCCTTGTATTTACC
CAGGTTCTTCATCAGTACCACTTGAAGTGCAGTTGGGAGGGCCCGAACTG
AGAGCTCTGTACTACCGTGCCTGTGAGGAGGGAGAAACGGAGGTCTTCAG
TGCCCGATTTGTACTTTTCGGCAAGTTCGGTAATGGTAAAACTAACCTGT
GTAACAGCCTACTTGGGTACAACTTTGATCCTGAGTGGAAAATCACCGAC
AGCATTGCGATCCACCCATGTGTCATGACTCAGGAAGGGCAATGGAAGGA
GTT

Coding sequence (CDS) from alignment at Sc0000053:1463350..1463852-

>transcript:BL90255_cuf0 ID=transcript:BL90255_cuf0|Name=transcript:BL90255_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=630bp|location=Sequence derived from alignment at Sc0000053:1463350..1463852- (Branchiostoma lanceolatum)
GTAAGCAGGAAAGAACCTCCGCTGGTTCTGGGGCATTATGCCGAGAACCA
CTATGCAAGTCTTGATGGTTCTTCATCAGTACCACTTGAAGTGCAGTTGG
GAGGGCCCGAACTGAGAGCTCTGTACTACCGTGCCTGTGAGGAGGGAGAA
ACGGAGGTCTTCAGTGCCCGATTTGTACTTTTCGGCAAGTTCGGTAATGG
TAAAACTAACCTGTGTAACAGCCTACTTGGGTACAACTTTGATCCTGAGT
GGAAAATCACCGACAGCATTGCGATCCACCCATGTGTCATGACTCAGGAA
GGGCAATGGAAGGAGGTAAGCAGGAAAGAACCTCCGCTGGTTCTGGGGCA
TTATGCCGAGAACCACTATGCAAGTCTTGATGGTTCTTCATCAGTACCAC
TTGAAGTGCAGTTGGGAGGGCCCGAACTGAGAGCTCTGTACTACCGTGCC
TGTGAGGAGGGAGAAACGGAGGTCTTCAGTGCCCGATTTGTACTTTTCGG
CAAGTTCGGTAATGGTAAAACTAACCTGTGTAACAGCCTACTTGGGTACA
ACTTTGATCCTGAGTGGAAAATCACCGACAGCATTGCGATCCACCCATGT
GTCATGACTCAGGAAGGGCAATGGAAGGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL90255gene:BL90255Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL90255_cuf0-E1BL90255_cuf0-E1-1564476830-232082Branchiostoma lanceolatumexon
BL90255_cuf0-E2BL90255_cuf0-E2-1564476830-232080Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL90255_cuf0transcript:BL90255_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000053genomeSc0000053:1463350..1463852 -
Properties
Property NameValue
Transcript idBL90255_cuf0
Biotypeprotein_coding