transcript:BL89964_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL89964_cuf0
Unique Nametranscript:BL89964_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL89964_cuf0

>transcript:BL89964_cuf0-protein ID=transcript:BL89964_cuf0-protein|Name=transcript:BL89964_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=255bp
EEHTDNIITSLEHKTENPLDFEITDEEIQNGLSSLKSNKSSGTDSIINEM
LKYGAPQLIQPFKKLFNLLLQSGHFPQQWSQSTLVPIYKSGETSNPTNYR
GIAISSCVGKLFTFILNKRLQYFLESSNLLSPFQSGFRKDFRTSDNVFVL
KTLIDQQTSKPGGKLYTCFIDFRKAFDSIWRNGLFYKLLSSGIGGNFFSI
IKSMYHNIEYCVKTPHGLSPYFQSLCGVRQGCNLSPLLFNLFINDFPSLL
DPTSC
Run BLAST on NCBI

mRNA from alignment at Sc0000612:16409..17174-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL89964_cuf0 ID=transcript:BL89964_cuf0|Name=transcript:BL89964_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=766bp|location=Sequence derived from alignment at Sc0000612:16409..17174- (Branchiostoma lanceolatum)
GAAGAACACACCGACAACATCATTACGTCGCTTGAACATAAAACTGAAAA
CCCGCTAGATTTTGAAATCACAGACGAGGAAATTCAAAATGGCTTATCTA
GTTTAAAAAGCAACAAATCCAGTGGAACAGATTCTATAATTAATGAAATG
CTGAAATATGGCGCCCCCCAACTCATACAACCCTTCAAAAAACTGTTCAA
TCTCCTGCTACAGTCTGGGCATTTTCCTCAGCAATGGAGTCAGAGCACAC
TTGTTCCCATCTACAAAAGTGGCGAAACATCAAATCCAACCAACTACAGA
GGAATAGCCATTTCTAGTTGTGTAGGCAAATTATTTACATTTATTTTAAA
CAAACGTTTACAGTATTTCCTGGAAAGCTCAAATCTACTATCTCCTTTTC
AATCCGGATTTAGGAAAGATTTCAGAACAAGTGATAACGTCTTCGTCCTC
AAAACACTAATCGACCAGCAGACTTCCAAACCCGGGGGTAAATTATATAC
TTGCTTTATAGATTTTCGGAAGGCTTTTGATTCAATTTGGCGAAATGGAT
TATTTTATAAACTTTTGTCTTCAGGGATAGGGGGGAACTTCTTTAGTATA
ATAAAATCAATGTATCATAACATAGAATATTGTGTCAAAACCCCACATGG
TCTGTCACCCTACTTTCAGTCTCTTTGCGGGGTGCGACAGGGTTGTAATC
TGAGTCCTCTCCTATTCAACCTATTCATCAATGATTTTCCATCTCTACTA
GATCCAACATCCTGCG

Coding sequence (CDS) from alignment at Sc0000612:16409..17174-

>transcript:BL89964_cuf0 ID=transcript:BL89964_cuf0|Name=transcript:BL89964_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=765bp|location=Sequence derived from alignment at Sc0000612:16409..17174- (Branchiostoma lanceolatum)
GAAGAACACACCGACAACATCATTACGTCGCTTGAACATAAAACTGAAAA
CCCGCTAGATTTTGAAATCACAGACGAGGAAATTCAAAATGGCTTATCTA
GTTTAAAAAGCAACAAATCCAGTGGAACAGATTCTATAATTAATGAAATG
CTGAAATATGGCGCCCCCCAACTCATACAACCCTTCAAAAAACTGTTCAA
TCTCCTGCTACAGTCTGGGCATTTTCCTCAGCAATGGAGTCAGAGCACAC
TTGTTCCCATCTACAAAAGTGGCGAAACATCAAATCCAACCAACTACAGA
GGAATAGCCATTTCTAGTTGTGTAGGCAAATTATTTACATTTATTTTAAA
CAAACGTTTACAGTATTTCCTGGAAAGCTCAAATCTACTATCTCCTTTTC
AATCCGGATTTAGGAAAGATTTCAGAACAAGTGATAACGTCTTCGTCCTC
AAAACACTAATCGACCAGCAGACTTCCAAACCCGGGGGTAAATTATATAC
TTGCTTTATAGATTTTCGGAAGGCTTTTGATTCAATTTGGCGAAATGGAT
TATTTTATAAACTTTTGTCTTCAGGGATAGGGGGGAACTTCTTTAGTATA
ATAAAATCAATGTATCATAACATAGAATATTGTGTCAAAACCCCACATGG
TCTGTCACCCTACTTTCAGTCTCTTTGCGGGGTGCGACAGGGTTGTAATC
TGAGTCCTCTCCTATTCAACCTATTCATCAATGATTTTCCATCTCTACTA
GATCCAACATCCTGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL89964gene:BL89964Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL89964_cuf0-E1BL89964_cuf0-E1-1564476830-487324Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL89964_cuf0transcript:BL89964_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000612genomeSc0000612:16409..17174 -
Properties
Property NameValue
Transcript idBL89964_cuf0
Biotypeprotein_coding