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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL89863_cuf0 >transcript:BL89863_cuf0-protein ID=transcript:BL89863_cuf0-protein|Name=transcript:BL89863_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=127bp
ITVLLHPNQVRVDKLNPRWTSSLLIGVVGQAPDKLSFPLTAVGIKKSSWI
IQGNALFNNSVKVREQYGPNLDSLHVGHLVGVMVDLNGCFHLFVNGVDQG
VAAHDIPVPCYVVIDLYGQCEQVRVHR Run BLAST on NCBI mRNA from alignment at Sc0001724:9..2587- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL89863_cuf0 ID=transcript:BL89863_cuf0|Name=transcript:BL89863_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2579bp|location=Sequence derived from alignment at Sc0001724:9..2587- (Branchiostoma lanceolatum)
CAATTACTGTTCTCTTACATCCCAATCAGGTGAGAGTAGACAAGTTGAAC
CCACGTTGGACATCATCACTGTTGATTGGAGTTGTAGGACAGGCTCCTGA
CAAACTCAGCTTTCCTCTCACAGCTGTGGGCATCAAGAAATCCTCCTGGA
TCATCCAGGGTAATGCCCTCTTCAACAACTCTGTCAAGGTAGGACATGGG
AACTCGATCCAGGTCACCCTAGATATATGAAGTGACCTTATTTTGAATGA
TTGAGGATAAATATTGGTTGATTATAGATGACAAGGAAAAAATTTGGAAA
AGAAATTTTACTGCTTGTTTTTCATGTCATCTGAATAGGTGAGGGAACAG
TACGGTCCAAATTTGGACAGTCTCCATGTTGGCCATCTTGTTGGAGTGAT
GGTAGACCTGAATGGATGCTTCCACCTCTTTGTGAATGGTGTAGACCAGG
GTGTGGCAGCCCATGATATCCCTGTTCCCTGTTATGTGGTCATTGATCTA
TATGGTCAGTGTGAGCAGGTAAGGGTCCATCGATAAGTTCCTGCTTCTGG
GTTTTTTAGAATATATTTCAGAACATGTATTGTAACATTAGTTCACCTAA
AACCGAGATTTTTCTGATAAGAGTTAATTGAAACCAATCTGGCAGAACAA
TAAGCCATCTTTTTTTGTTATTCTGTCAATATCATAGATAACATTTGTCA
CTTACGCTATATATATATTATATTTTCTATCTAGTCGTGCTTATACCATG
ATATTGCAATTTGAAACTACCGTCTGTTGCACTAAGAATGACCGTGATCT
CGGACTAATGCTAACATTTTCCTTTTTTGGCTTGAATAGAGTGTCATCCT
GTTTCAGTTCCAGGCTAAGCTTCAAACATGCTATGAAGAGAGTGCTAAGG
ATATAAACGTGTCCAAGCAACAACAAAAATGACAAAACAGCCGCACCGCA
TTAGCCCTTCGTTAACGACCCGTTTATTGAGTCAATAGAATGTCACTCAA
ATTGGATCCCACGGTCATGGCAGCTTGTGCATTAGTTATTGGGATGTTCA
TGGGATGCAATACTAGTAGCTATTGTAATGCTAATATGTCCATGTGTTCC
TGGTTGTGTCTGGAGCAAAATTTGAGGAAAATATTGCCTTTACACACAAA
AAATTAAGACAAAAAAGTGTTCCTCACAAAATTTTGTCGTCTGCTGAATG
ATACAATTCTGGGTAATGAAACTGGTGGCGGCAAAATACACCAGAGTGCC
ATAGGTGGCAGCAACAAAAGGCTTTTAGCAAAAAAGATTTAAATAAGTTG
TCTAGTAAATGATTGTGTTAAACAGGAAGTGGATGTGACATTTGTATTAT
AAACCAGCAAACAACCATGTAGTGTAATTCTCCCATGACGCCCTCAGACT
GTTTCCATAAGGGGCGGAGAGTTTTTGACGTCGTCATCTTCGAATGCATG
GTTATCGAAGCTTTTCAGACAGTGTTCTGAATACTTAAGTATGCCAAATT
TGCATTTCTGGTGGTATTACTAATGTTGCATCAAGCACATATCCCTAAAT
GCCCCATTTTAGTGGCATTGTGTGGCGCAATCGAATAGCTAAGGGTGTTT
CGCCCACAACCGAGAGGTCCCGAGTTCGAAACCACCGATATGCCCCGATG
TTGTGCTCTTGGAAAAGGCACTTTACACGACTTTCCTCACTTCACTTAGG
TGTAAATGAGTACCTAGCTTCGGTAAGGGGCGTCCCTCGGATAGGACGCT
AAATGGAGGTCCTGTGTTTGAGGAGAGCCACACCTCGAGCACGTTAAAGA
ACCCACCGCACGTATCGAAAAGTGTAGGGGTCCTTCCCGGTGTGAGTGGT
TCAAAACCTACTGTAACAGTCCTATGGCCGCCCTTAGTAATAGCCTACGG
CTAGTTGGGCAACCTTGGCATGTACATGCTGAACCAATAAATAAAATGCC
CCATTTTTAAAATCCCGGTTTTATAATACGCTGCGGTTCTATGTGAACTA
ACGTTACCTGACTGTACACTTTGCACACAGGTGCGTCCTGGAAGTCATGC
GTAAATCTGTGCTGTCTTAATCATGAAACGTCGAAATACATGGCACATTG
TCTGTTAGTGGTGGGTACCAGACTACCAGTTCCGCTTTTCTTCTGCGCTG
TGCATCAGTCTGGCTTCTGATTTGAGCTGTCTGGACATCTCCACCTGGAA
TGGTCACTTGCAAGGGCCTCCCAGTGCTCCATATCAATATCTAGAGCCTT
CAAGTCCCTCAAGAGATAGTCTATGCGGTATTTATAATTCGGCCCCAAAC
CGTGTAAAGGAGTGTACTATATATACTAGATGTTATACATTCAAGTAACA
ATAACAGTGCAACAATTATCATCTACGTCTTAAGGATGCAGTCCCAAAAG
TGACTGAGTCTAGTATCTATATCCCCCCTCATCAGGGTTCATGGCTGGAG
TGGATTTATCTAGCCTCCTTAATCCAACTTGTGCATCTATTGTCCTCTTT
GTCACCTTGGCCCCCTCCCAGTCTATTATGTACTATTAGTTGTTCCTAGT
GATGTTATCTTCCTTCTCGTCCTCCTTCT Coding sequence (CDS) from alignment at Sc0001724:9..2587- >transcript:BL89863_cuf0 ID=transcript:BL89863_cuf0|Name=transcript:BL89863_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=768bp|location=Sequence derived from alignment at Sc0001724:9..2587- (Branchiostoma lanceolatum)
ATTACTGTTCTCTTACATCCCAATCAGGTGAGAGTAGACAAGTTGAACCC
ACGTTGGACATCATCACTGTTGATTGGAGTTGTAGGACAGGCTCCTGACA
AACTCAGCTTTCCTCTCACAGCTGTGGGCATCAAGAAATCCTCCTGGATC
ATCCAGGGTAATGCCCTCTTCAACAACTCTGTCAAGGTGAGGGAACAGTA
CGGTCCAAATTTGGACAGTCTCCATGTTGGCCATCTTGTTGGAGTGATGG
TAGACCTGAATGGATGCTTCCACCTCTTTGTGAATGGTGTAGACCAGGGT
GTGGCAGCCCATGATATCCCTGTTCCCTGTTATGTGGTCATTGATCTATA
TGGTCAGTGTGAGCAGGTAAGGGTCCATCGATAAATTACTGTTCTCTTAC
ATCCCAATCAGGTGAGAGTAGACAAGTTGAACCCACGTTGGACATCATCA
CTGTTGATTGGAGTTGTAGGACAGGCTCCTGACAAACTCAGCTTTCCTCT
CACAGCTGTGGGCATCAAGAAATCCTCCTGGATCATCCAGGGTAATGCCC
TCTTCAACAACTCTGTCAAGGTGAGGGAACAGTACGGTCCAAATTTGGAC
AGTCTCCATGTTGGCCATCTTGTTGGAGTGATGGTAGACCTGAATGGATG
CTTCCACCTCTTTGTGAATGGTGTAGACCAGGGTGTGGCAGCCCATGATA
TCCCTGTTCCCTGTTATGTGGTCATTGATCTATATGGTCAGTGTGAGCAG
GTAAGGGTCCATCGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001724 | genome | Sc0001724:9..2587 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL89863_cuf0 |
| Biotype | protein_coding |
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