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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL89814_cuf0 >transcript:BL89814_cuf0-protein ID=transcript:BL89814_cuf0-protein|Name=transcript:BL89814_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=132bp
FKSLYKEEEYLSISNIQHRVAVTKFRISCHKLHIETGRHNRTLLEHRVCQ
FCELNQIEDERHFILDCKLYDIERNVLFKCINEKFPYFEYLNATDKFIFL
LRLDNPCIRNVICSYIYTCTKKREEVDFTRLA Run BLAST on NCBI mRNA from alignment at Sc0000228:444113..448224+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL89814_cuf0 ID=transcript:BL89814_cuf0|Name=transcript:BL89814_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=4112bp|location=Sequence derived from alignment at Sc0000228:444113..448224+ (Branchiostoma lanceolatum)
GTTTAAGTCCCTGTATAAGGAAGAAGAGTATTTATCTATAAGTAACATAC
AGCATAGAGTAGCTGTCACTAAATTCAGGATTAGTTGTCACAAATTACAT
ATTGAAACAGGAAGGCACAACCGCACGCTTCTAGAACATAGAGTTTGCCA
ATTTTGTGAGTTAAATCAAATAGAAGATGAGCGGCACTTTATTTTAGATT
GTAAACTTTACGATATAGAAAGAAATGTTCTTTTCAAATGCATTAATGAG
AAATTCCCATACTTTGAATATTTAAACGCAACGGATAAATTCATATTTTT
GTTGCGTCTAGATAACCCTTGTATAAGAAACGTGATCTGTTCATACATCT
ACACATGTACAAAGAAGCGAGAAGAAGTTGACTTTACTAGATTAGCTTAG
CTTATCCTTTTCTTCTTCCATGTATGTTTACACAATGTACTGTAAATATT
TCACTGTATATGTCACTTAGATGTTAGTTTGGTTTGTGTTAAACGACCTG
TATCTAGCCCCTCGGGGCACGAACATACAATAAAGGTCTTCAATCATTAC
ATACACTGAGTTTACAATGAGTTGTACCCTCTTCCAATGTTGCTGGCTTT
CTGTGGTTCCTTTTCTAAATCTTCTGCGCAAATCGTCGCTTTCAATGATT
GAGTTGAAACTTTGTAGGAATAATTTTGTTTGGATAACATGTAACCTTAG
ATGCTTTATTTAAGAAATTACATGGACAAAAAGTATCATATCTTTCCACA
CAGACGTAGATCAGAGTTTGGTGAAACGCGTCTGTCGGATTGGGTGGACC
CAACATAACAACCGCTGCTACCAGCTGAGTGCAGAGTCGGTCGACTGGTC
TACAGCGGACAGGCGGTGTGAAGAAGCAGGTGCAAATCTTGCTTCTGTTG
AAAACGATGCGGAAAACAACGCCATCAAAGAGATCATTTCTACGGGTAGG
CAATGAACAACTCTATCTTCTCACTGATTATAGAAGCCCCTGTGTAATTT
TTGGATTCAAGGTGCAAACGTAAAAGTGCCCCTTAACCTTCAATAATCCT
AGTGCAGACCTATGTAGCATTGCTAACGTCACATGACTGACTGACAACTG
ATTTAACAACTTGACGTTTGCCTTTCGCTGCAGCCCGCGCAAAGTTTCCA
GTAGTCTGGCTTGGGCTAAAGGACATTAAAAAATCGACTTGGACGGATGG
ATCGCAAGTTTCCTACACCAACTGGGCCCCACATGAGCCGGACAGCATCA
GAACAAGGAGGCCAGCCGTTTGGTTCAGAGCCCTAGTTGGAGCCCTGAGA
GGCCGAAAACATCCAGACAACTGTGTCGCTATCTACTATAAAGTGAGTGC
TTCTGTCTGTCTTCTTCCTTTTTCTGATTGGCGAAGAATGCATTACGGTT
TGCTTAGAATTGGCGTTATGCTGAGTGTTTTCCGACATTCTTTTATCAGA
TGCCACTAACGTGTTTCAACTACATCTAATATAAGTGGGAAGTACCAAAG
CCCCTATATGACTTTGGAAAAAAATCACATTACCAGAGTGCTTTGTAATC
ATTATTCTTTCTCGTAATGTGAGAGAAACATGAGAGTATTTTTTTCAAAG
AAGACGACGTTGAATCGAGATGTCTGTGATGGCAGTTGTTTTGGCTTCTA
TTTGATTCTGTAAGTTATCAATATTCATCAAGATCCAGACCTAAAATTGT
AGCCTTCCGAGAGAAACGAATTACAAAATCTATGGTAACGTTAACAAGAA
AGTGACGGTAATATATTACTACTAACTTTTTTTGGGCACATCTTATCTTT
CAACAGGACGCCAGACATCCTATTTTCGGATTGAGAAAAAGAGGACTATG
GAAGGATGACTTTTGCAACCGGAAGTACCTCTACCTTTGCAAGAGTTCAC
AATGGTAACAAGCTGATAGGGGGCCCAAACCTACACCACTTCTTTATTAC
ATCACAAGCTATCTACCACCAAAGGTCAAGACCATAGCATGTCCAGGTCA
AAAGATACAAAAACGGAAGTTCTGCTGCAGTACCAAGGTCACATACCAGG
GGGCCCAAAATCGACCTTCAGTTTCGGCTTCACCCACATATCAAATTTCA
TCGTAATCCATCAAGAGGTTCTTGAGTTATACTGACTACAGTAGTGCGGA
AACACAAACACACAGACACACACACACATGTGCACACACANCACACGCGC
GCACGCGCGCGCGCACAGACACACACACAAAACTATATCTCCATTTTTCA
TGGAGATGAGAACACGATCCCAGTTGGAAATTACAGAAAACCACGACCTT
ACATTTTAGAATAAAGGGAAGACAAGGTTGAATCACAGAAGTAAATGAAA
TTGAATCCTCCAAGTAAATGTACAAAAGACAATGAATATAACTGTTAACA
TCTAGTCTTAGCGATGCAACAGTCGTAATGTTTGAAGTAGAGGAAGTTCT
TTATTGCATCAATAGACCATATCATTGCCGAAAACTAAAGAAAGGAAAAT
AGGAATTGAACTTATAACAGTAGGGTCTTGTGCAGAGTGCTTACCACTCC
TTACTTGGTGCAGGAAGTATTGATGATGTCCATGCAAACTCCACAGGGAA
AAGGAACAGCAAAGTTATATTCTATGTTTTGTGTTATGGACAGTTTTGCA
AGAGTTTGTAGCAGTGAAGGAGATTGGCATTCATATTTGTTCGTCATTTT
ATAGACATGGGCGTACAATTTATCATATTTAAATTTGAAGTAGCAGTATA
GTGTTGATCCTATGATATCAACATTTAAGTGCCAGACAATTGTAAGTATT
GAAATGAGTGTTGCAAATAGGTTTTCTTGGGAATACGATGTATGAGTTAG
ACTTGTATGTCACAATTGGAAATGTGCTTGGAGTATGTAAGTGGATGCAT
TGTTGAGTAATCGTCTAAAGATGCCAAGGGAAAGTGTCCACATATATCCA
TTACGTACAAGATGTGAAGTGTACATGAATGTAGGTGGCGCTTCCACAGG
CGGCCTTGGTGTGACATGGGCTCCTCACACGGCGCCCAATAATTGAGCAT
GTTTATGTCAAATAAGGTTGTCAAAAGTCTTAAATGTCATTCTAAATGAA
GATGAAGGTGTATGGACCTGGTTGGGACAGTATTCACTGGCTGTAAGCCA
ATATTCCTGTTTGTTTTCACATTTTGGCAAGTCGGGACTGTATACCCCAT
GAGAGCCTTATCTGCAGTACCGCTCCCGGCCGCAGCCAGAAAAGTGTTAA
TACCAAATTGCCAAATTTCTCTCTTTTCGGGAATGGGGAAATCACGAAAG
GCTCGCAAAGAGGTTTGAATTTTTGAGTCTCACTTGGCTTTTTTCCAATA
ATGCGACCATTCAAATGAAGAATGACAATATCTAAGACATTTTACAAACA
CAACCATGGCACATTAGGCCATGGATGACACATTTCCTATACATTTTACC
ATCAGTAGTGTCCTATAAATTGTGATGTTCTGAAGGGGTTCCTCATCCAA
ATCTAATCAACATTTTGTGAAACAAAAAGACATTGGACAAGCGCAACGTT
GTTTCTGCCTGCTGGTTTATCAGAGGATCCAATTTTTATTTCAAAATACT
GCGAAGTGTGTGGGTTATTTGCAGGTTATTGATATAACCTTGAGCACCAG
GGGGCGCTCAGCGATGGGAGCTGGGCTTATAGAACAAGACTTGGTGTTGA
ATTTAATTGGGTACACCGTCTTCTTACACAAGATGTAACTCATGACGAAA
GTACAATGATAGAGGTTGAATGAATGATTTGGAAAAAAAAATCACGTGAG
CTTTTCCAAAACAGGAGCGTAGACTCAACTCAAAAAGTTGCCATTATAGG
AGAGCACTTATATGTTTGTAAATTGTATTGTTTCATATTTCAAGAGAGTG
CAATGCCACTCATAATCATAATCCATCCATGTGAATTTTGCATTCTGCTT
GTAGATTCTAGCTTTTATTAAATGACGTTTCGTGTATTTTATGTATGAGA
CTTTTGTGTTTATTATGATATATTGGTGTATTTTTATGCAATCAATTGGC
CGTTTTTTAAGGAAGTTTGAAAAGGTCATTTAGGCTGTGTAATAAACCAC
AAGTAAAACTAC Coding sequence (CDS) from alignment at Sc0000228:444113..448224+ >transcript:BL89814_cuf0 ID=transcript:BL89814_cuf0|Name=transcript:BL89814_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=399bp|location=Sequence derived from alignment at Sc0000228:444113..448224+ (Branchiostoma lanceolatum)
TTTAAGTCCCTGTATAAGGAAGAAGAGTATTTATCTATAAGTAACATACA
GCATAGAGTAGCTGTCACTAAATTCAGGATTAGTTGTCACAAATTACATA
TTGAAACAGGAAGGCACAACCGCACGCTTCTAGAACATAGAGTTTGCCAA
TTTTGTGAGTTAAATCAAATAGAAGATGAGCGGCACTTTATTTTAGATTG
TAAACTTTACGATATAGAAAGAAATGTTCTTTTCAAATGCATTAATGAGA
AATTCCCATACTTTGAATATTTAAACGCAACGGATAAATTCATATTTTTG
TTGCGTCTAGATAACCCTTGTATAAGAAACGTGATCTGTTCATACATCTA
CACATGTACAAAGAAGCGAGAAGAAGTTGACTTTACTAGATTAGCTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:444113..448224 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL89814_cuf0 |
| Biotype | protein_coding |
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