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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88624_cuf0 >transcript:BL88624_cuf0-protein ID=transcript:BL88624_cuf0-protein|Name=transcript:BL88624_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=672bp
EQQPKPGLQETVVVKGMLPTATPQPDEQQPKPGLQETVVVKGMLPTATPQ
PDEQQPKPGLQETVVVKGMLPTATPQPDEQQPKPGLQETVVVKGMLPTAT
PQPDEQQPKPGLQETVVVKGMLPTATPQPDEQQPKPGLQETVVVKGMLPT
ATPQPDEQQPKPGLQETVVVKGMLPTATPQPDEQQPKPGLQETVVVKGML
PTATPQPDEQQPKPGLQETVVVKGMLPTATPQPDEQQPKPGLQETVVVKG
MLPTATPQPDEQQPKPGLQETVVVKGMLPTATPQPDEQQPKPGLQETVVV
KGMLPTATPQPDEQQPKPGLQETVVVKGMLPTATPQPDEQQPKPGLQETV
VVKGMLPTATPQPDEQQPKPGLQETVVVKGMLPTATPQPDEQQPKPGLQE
TVVVKGMLPTATPQPDEQQPKPGLQETVVVKGMLPTATPQPDEQQPKPGL
QETVVVKGMLPTATPQPDEQQPKPGLQETVVVKGMLPTATPQPDEQQPKP
GLQETVVVKGMLPTATPQPDEQQPKPGLQETVVVKGMLPTATPQPDEQQP
KPGLQETVVVKGMLPTATPQPDEQQPKPGLQETVVVKGMLPTATPQPDEQ
QPKPGLQETVVVKGMLPTATPQPDEQQPKPGLQETVVIQKTEATTKSQPE
EQQTKPGLHETVVVQKVEPTIK Run BLAST on NCBI mRNA from alignment at Sc0000103:447986..450004+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88624_cuf0 ID=transcript:BL88624_cuf0|Name=transcript:BL88624_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2019bp|location=Sequence derived from alignment at Sc0000103:447986..450004+ (Branchiostoma lanceolatum)
ACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGG
ATGTTACCTACTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGG
ACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTC
AACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTA
AAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAACAACCAAA
ACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAA
CACCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTA
GTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAACA
ACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTA
CTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAG
ACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGA
ACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGT
TACCTACTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGGACTC
CAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACC
AGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGG
GGATGTTACCTACTGCAACACCTCAACCAGACGAACAACAACCAAAACCT
GGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACC
TCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGG
TAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAACAACCA
AAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGC
AACACCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTG
TAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAA
CAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACC
TACTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGG
AGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGAC
GAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGAT
GTTACCTACTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGGAC
TCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAA
CCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAA
GGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAACAACCAAAAC
CTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACA
CCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGT
GGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAACAAC
CAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACT
GCAACACCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGAC
TGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAAC
AACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTA
CCTACTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGGACTTCA
GGAGACTGTAGTTATACAGAAGACGGAAGCGACTACCAAATCTCAACCAG
AAGAACAACAGACAAAACCTGGACTCCATGAGACGGTAGTGGTACAAAAG
GTGGAACCGACTATCAAAT Coding sequence (CDS) from alignment at Sc0000103:447986..450004+ >transcript:BL88624_cuf0 ID=transcript:BL88624_cuf0|Name=transcript:BL88624_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2016bp|location=Sequence derived from alignment at Sc0000103:447986..450004+ (Branchiostoma lanceolatum)
GAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGAT
GTTACCTACTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGGAC
TCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAA
CCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAA
GGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAACAACCAAAAC
CTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACA
CCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGT
GGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAACAAC
CAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACT
GCAACACCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGAC
TGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAAC
AACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTA
CCTACTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGGACTCCA
GGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAG
ACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGG
ATGTTACCTACTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGG
ACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTC
AACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTA
AAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAACAACCAAA
ACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAA
CACCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTA
GTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAACA
ACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTA
CTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAG
ACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGA
ACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGT
TACCTACTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGGACTC
CAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACC
AGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGG
GGATGTTACCTACTGCAACACCTCAACCAGACGAACAACAACCAAAACCT
GGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGCAACACC
TCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTGTAGTGG
TAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAACAACCA
AAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACCTACTGC
AACACCTCAACCAGACGAACAACAACCAAAACCTGGACTCCAGGAGACTG
TAGTGGTAAAGGGGATGTTACCTACTGCAACACCTCAACCAGACGAACAA
CAACCAAAACCTGGACTCCAGGAGACTGTAGTGGTAAAGGGGATGTTACC
TACTGCAACACCTCAACCAGACGAACAACAACCAAAACCTGGACTTCAGG
AGACTGTAGTTATACAGAAGACGGAAGCGACTACCAAATCTCAACCAGAA
GAACAACAGACAAAACCTGGACTCCATGAGACGGTAGTGGTACAAAAGGT
GGAACCGACTATCAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000103 | genome | Sc0000103:447986..450004 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88624_cuf0 |
| Biotype | protein_coding |
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