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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL88362_cuf1 >transcript:BL88362_cuf1-protein ID=transcript:BL88362_cuf1-protein|Name=transcript:BL88362_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=179bp
RISGSTTYQTSRMTTYTMTGQSFSGRSVYQSSSGDYLYYQTSDTTWNVGA
VLGSITVGMYVTDTSMYADDTSGIWHLTDGSDFHADSLVSVTGTCSTGVS
IGLSTGAIVGIVVGVFFGVVILIVVLCCCCVCAASKKIGSAAANPPPPAY
PGPPEPERDGTVVIIGLIVPATRNTDDTD Run BLAST on NCBI mRNA from alignment at Sc0000055:1048616..1050108- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL88362_cuf1 ID=transcript:BL88362_cuf1|Name=transcript:BL88362_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1493bp|location=Sequence derived from alignment at Sc0000055:1048616..1050108- (Branchiostoma lanceolatum)
CCGTATTTCTGGATCTACCACCTACCAGACTAGCCGCATGACAACCTACA
CCATGACGGGACAGAGTTTCAGTGGTCGATCGGTGTATCAATCGTCTAGT
GGTGACTACCTGTACTACCAGACTTCGGATACAACCTGGAATGTTGGTGC
CGTCTTGGGGAGTATTACTGTGGGGATGTACGTTACAGACACGAGTATGT
ACGCTGACGACACATCCGGGATATGGCATCTGACCGATGGCAGCGATTTT
CATGCAGATAGTCTCGTGAGCGTTACCGGTACTTGCTCAACAGGTAGGTA
TTGAACCTTTCTACATGAATCTTCTGGCAATTTGCGAGCGATTTAGAAAA
ACTCACACATGTTAGACACAATGATATCCTTGCTTCCCTTCACAGTGCTG
CAGCCAGAGAAAAAGTGGATTCTAGAAATCAATAGAATAACAACAACAAC
AACAAGAAAGCACAAGTCGTATAGAAATTGCTAAAATACCATATGCTAGC
GTTTGAGGCGACCGATCCAGACAAATTGTTTTGATAAGTTTATTGTAGCC
GTCACCTGATACCAATTTAATGTTCCCATGCGTTCCTCTTTCGACAGTCT
ACATGTATTTCTATGTGTTATGTTTTATACGAGTAACGAAACACGAATAT
TGAAAATCATATTTCTAATTCGTCGATGAAGTTTAGACACCCAGATAATA
AACAACATAATAGAAACGTTAATCAACTGGATAGATTTTGTAAACGGCCG
GACGTGTCAGCTCATCCCCTACCTTTCTCCAATAACTGACGAAAGATAGT
TGATGCGAACTGAGATCTATGCTTGACCGTTTACAAATCTATGCAGTTGC
TTGGGTAACTTTTGTATTGTGTGTACAATTTCAAATTATTTACGTCGCAC
CCATCTTCTTGTTTTCCTTAGGTGTCTCGATAGGGCTAAGCACCGGGGCT
ATCGTTGGCATCGTAGTCGGAGTCTTTTTCGGTGTGGTGATTCTCATAGT
TGTTTTGTGCTGTTGTTGTGTCTGTGCCGCCTCTAAGAAAATCGGATCTG
CAGCAGCCAACCCGCCACCCCCAGCTTACCCTGGACCCCCAGAACCAGAA
AGAGACGGAACAGTGGTGATCATAGGTTTGATTGTGCCCGCCACTAGAAA
CACTGATGACACTGATTAACACGTTCAATGTCACATTTCCCGTTACTTGA
AGTATCTGGCTGTTTTCGTGTGTGAACATCGGATATACATGTAGAAGACA
TTATGACAGAGCTGTCGTGCACCTTACCGTACACTATTAGTAACCTCGCC
ATGGCGAATAGGTATAAGATTTCACACGTGATTGTTTGTTTGTTGTTCCT
TTGTTGCTGGTAGTGTTTGCTCATTTGTGATCTGAAGTTCGAGATGCGTT
TCTTTGTTATCAACCTGGTACTGACAATACCTTTACAGTCCATTGATGTT
TTCTGGACACGGTAGAGAAGTCAGTAGAAAGCAGGCCACTTCC Coding sequence (CDS) from alignment at Sc0000055:1048616..1050108- >transcript:BL88362_cuf1 ID=transcript:BL88362_cuf1|Name=transcript:BL88362_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1080bp|location=Sequence derived from alignment at Sc0000055:1048616..1050108- (Branchiostoma lanceolatum)
CGTATTTCTGGATCTACCACCTACCAGACTAGCCGCATGACAACCTACAC
CATGACGGGACAGAGTTTCAGTGGTCGATCGGTGTATCAATCGTCTAGTG
GTGACTACCTGTACTACCAGACTTCGGATACAACCTGGAATGTTGGTGCC
GTCTTGGGGAGTATTACTGTGGGGATGTACGTTACAGACACGAGTATGTA
CGCTGACGACACATCCGGGATATGGCATCTGACCGATGGCAGCGATTTTC
ATGCAGATAGTCTCGTGAGCGTTACCGGTACTTGCTCAACAGGTGTCTCG
ATAGGGCTAAGCACCGGGGCTATCGTTGGCATCGTAGTCGGAGTCTTTTT
CGGTGTGGTGATTCTCATAGTTGTTTTGTGCTGTTGTTGTGTCTGTGCCG
CCTCTAAGAAAATCGGATCTGCAGCAGCCAACCCGCCACCCCCAGCTTAC
CCTGGACCCCCAGAACCAGAAAGAGACGGAACAGTGGTGATCATAGGTTT
GATTGTGCCCGCCACTAGAAACACTGATGACACTGATTAACGTATTTCTG
GATCTACCACCTACCAGACTAGCCGCATGACAACCTACACCATGACGGGA
CAGAGTTTCAGTGGTCGATCGGTGTATCAATCGTCTAGTGGTGACTACCT
GTACTACCAGACTTCGGATACAACCTGGAATGTTGGTGCCGTCTTGGGGA
GTATTACTGTGGGGATGTACGTTACAGACACGAGTATGTACGCTGACGAC
ACATCCGGGATATGGCATCTGACCGATGGCAGCGATTTTCATGCAGATAG
TCTCGTGAGCGTTACCGGTACTTGCTCAACAGGTGTCTCGATAGGGCTAA
GCACCGGGGCTATCGTTGGCATCGTAGTCGGAGTCTTTTTCGGTGTGGTG
ATTCTCATAGTTGTTTTGTGCTGTTGTTGTGTCTGTGCCGCCTCTAAGAA
AATCGGATCTGCAGCAGCCAACCCGCCACCCCCAGCTTACCCTGGACCCC
CAGAACCAGAAAGAGACGGAACAGTGGTGATCATAGGTTTGATTGTGCCC
GCCACTAGAAACACTGATGACACTGATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000055 | genome | Sc0000055:1048616..1050108 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL88362_cuf1 |
| Biotype | protein_coding |
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