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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87870_cuf0 >transcript:BL87870_cuf0-protein ID=transcript:BL87870_cuf0-protein|Name=transcript:BL87870_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=437bp
EIFTWLKDKNCHIYCLQETHSLMSVETEWLSDWGGQIFFNHGLSNSRGVM
ILFNASVSYTIHQTLSDNSGRWIVLDISLDSMRFCLINIYGPNSDDPSFF
TNLESTIHNCIDPALYVVAAGDFNTVLNSDMDRAGHRLFNYHPKSRQAIN
SLCVNLDLLDIYRHKNTTERRYTWRRRFQASRIDYFLISFSLVSSVQNVR
IEDSFRSDHSFIGLSLITSPIPRGKGYWRFNQDLLRDSVFVKETSDFITD
FFRYNEGSANPHVVWDTFKCCVRGHIIKYSSWKYKQRTKTELSLTSEICS
LQEELDTLSDANTFDKLQEKKQELVLLYQIKSNNIIASKRAKCMEQGEKC
TKFFMNLVTKDKARKNMSTFITADGQVKTNPLHILEEQANFYHSLYSFKE
PPMSIDQDIFEPFFPKLKPVSLSAEQREKCEGLITEK Run BLAST on NCBI mRNA from alignment at Sc0000189:105347..106659+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87870_cuf0 ID=transcript:BL87870_cuf0|Name=transcript:BL87870_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1313bp|location=Sequence derived from alignment at Sc0000189:105347..106659+ (Branchiostoma lanceolatum)
NGAAATATTTACATGGTTAAAAGATAAAAACTGTCATATTTATTGCCTAC
AAGAAACCCACTCTTTAATGTCTGTTGAAACAGAATGGCTGTCAGACTGG
GGGGGACAAATATTTTTCAACCACGGCTTAAGTAATAGTAGAGGAGTAAT
GATTCTTTTCAATGCAAGTGTCTCCTACACAATCCATCAGACCTTGAGTG
ACAACTCCGGTCGATGGATTGTGTTGGATATTTCTTTAGATTCTATGCGC
TTCTGTTTGATTAATATATATGGCCCCAATTCTGACGACCCTTCTTTTTT
CACAAACTTGGAATCAACTATACATAATTGCATTGATCCTGCATTATATG
TTGTTGCCGCAGGAGACTTCAATACTGTTCTAAACTCAGATATGGACAGA
GCCGGACATCGACTTTTCAATTACCACCCTAAATCTCGCCAAGCTATTAA
TTCTTTATGTGTAAATTTAGACTTATTAGACATTTATAGACACAAAAATA
CTACGGAAAGACGATACACTTGGAGACGTCGTTTCCAGGCTAGCCGTATC
GATTATTTCTTAATTTCCTTTTCGTTAGTTTCCTCCGTACAGAACGTTAG
AATAGAAGATAGTTTTAGATCTGATCACTCTTTTATTGGACTATCACTTA
TTACCTCACCAATACCCAGGGGTAAAGGATATTGGAGATTTAACCAAGAC
TTATTAAGGGACTCAGTTTTCGTTAAAGAAACTTCAGATTTTATAACAGA
CTTTTTCCGTTATAATGAGGGTTCTGCAAATCCGCATGTCGTGTGGGACA
CTTTTAAATGCTGTGTTCGTGGACACATTATTAAATATTCTTCTTGGAAA
TATAAACAACGTACAAAAACGGAACTTTCCTTAACAAGTGAAATCTGCAG
CCTGCAAGAGGAGCTAGATACTCTTTCAGATGCAAACACATTCGATAAGT
TACAGGAAAAGAAACAAGAATTAGTATTGTTGTATCAAATAAAATCTAAT
AATATAATCGCCAGCAAAAGAGCCAAGTGCATGGAACAAGGAGAAAAATG
TACTAAATTTTTTATGAACTTAGTCACCAAAGACAAAGCTCGGAAAAATA
TGTCTACATTTATCACAGCAGATGGGCAGGTTAAAACTAATCCTTTGCAT
ATTCTTGAGGAACAAGCCAACTTTTATCATAGCCTTTATTCATTTAAGGA
ACCACCTATGTCAATAGATCAGGATATATTTGAACCCTTTTTTCCTAAAT
TGAAACCTGTTTCTTTATCTGCTGAGCAGCGTGAAAAATGTGAAGGATTA
ATAACTGAAAAAG Coding sequence (CDS) from alignment at Sc0000189:105347..106659+ >transcript:BL87870_cuf0 ID=transcript:BL87870_cuf0|Name=transcript:BL87870_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1311bp|location=Sequence derived from alignment at Sc0000189:105347..106659+ (Branchiostoma lanceolatum)
GAAATATTTACATGGTTAAAAGATAAAAACTGTCATATTTATTGCCTACA
AGAAACCCACTCTTTAATGTCTGTTGAAACAGAATGGCTGTCAGACTGGG
GGGGACAAATATTTTTCAACCACGGCTTAAGTAATAGTAGAGGAGTAATG
ATTCTTTTCAATGCAAGTGTCTCCTACACAATCCATCAGACCTTGAGTGA
CAACTCCGGTCGATGGATTGTGTTGGATATTTCTTTAGATTCTATGCGCT
TCTGTTTGATTAATATATATGGCCCCAATTCTGACGACCCTTCTTTTTTC
ACAAACTTGGAATCAACTATACATAATTGCATTGATCCTGCATTATATGT
TGTTGCCGCAGGAGACTTCAATACTGTTCTAAACTCAGATATGGACAGAG
CCGGACATCGACTTTTCAATTACCACCCTAAATCTCGCCAAGCTATTAAT
TCTTTATGTGTAAATTTAGACTTATTAGACATTTATAGACACAAAAATAC
TACGGAAAGACGATACACTTGGAGACGTCGTTTCCAGGCTAGCCGTATCG
ATTATTTCTTAATTTCCTTTTCGTTAGTTTCCTCCGTACAGAACGTTAGA
ATAGAAGATAGTTTTAGATCTGATCACTCTTTTATTGGACTATCACTTAT
TACCTCACCAATACCCAGGGGTAAAGGATATTGGAGATTTAACCAAGACT
TATTAAGGGACTCAGTTTTCGTTAAAGAAACTTCAGATTTTATAACAGAC
TTTTTCCGTTATAATGAGGGTTCTGCAAATCCGCATGTCGTGTGGGACAC
TTTTAAATGCTGTGTTCGTGGACACATTATTAAATATTCTTCTTGGAAAT
ATAAACAACGTACAAAAACGGAACTTTCCTTAACAAGTGAAATCTGCAGC
CTGCAAGAGGAGCTAGATACTCTTTCAGATGCAAACACATTCGATAAGTT
ACAGGAAAAGAAACAAGAATTAGTATTGTTGTATCAAATAAAATCTAATA
ATATAATCGCCAGCAAAAGAGCCAAGTGCATGGAACAAGGAGAAAAATGT
ACTAAATTTTTTATGAACTTAGTCACCAAAGACAAAGCTCGGAAAAATAT
GTCTACATTTATCACAGCAGATGGGCAGGTTAAAACTAATCCTTTGCATA
TTCTTGAGGAACAAGCCAACTTTTATCATAGCCTTTATTCATTTAAGGAA
CCACCTATGTCAATAGATCAGGATATATTTGAACCCTTTTTTCCTAAATT
GAAACCTGTTTCTTTATCTGCTGAGCAGCGTGAAAAATGTGAAGGATTAA
TAACTGAAAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000189 | genome | Sc0000189:105347..106659 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87870_cuf0 |
| Biotype | protein_coding |
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