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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87822_cuf1 >transcript:BL87822_cuf1-protein ID=transcript:BL87822_cuf1-protein|Name=transcript:BL87822_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=178bp
MSKMMRDDAKIARNLFLQGTGHVSRDRTNSNPAIIGHQGRANVTSGSGPT
GASSVLPPSERHSKASSFRKTGEETGNPDRVRWFPSGRLGSTVTSRQRDL
TKAADRLSTFFDWPSSAQVRAELLAKQGFYYLGTGDKVECAFCGGQLHQW
ELSDDPETEHSRHFPQCPRVVSIRTYFR Run BLAST on NCBI mRNA from alignment at Sc0000003:1012537..1014104+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87822_cuf1 ID=transcript:BL87822_cuf1|Name=transcript:BL87822_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1568bp|location=Sequence derived from alignment at Sc0000003:1012537..1014104+ (Branchiostoma lanceolatum)
CTGACAGCTACTTAGCCGCCATCTTGCTAACTGAAAGTACAACTCTACGT
TAACGTTCATCGTCGGACGGCCAGATTGAACAGGAACCGCAGGTAACCTA
AAGATTACTGTGTCTTCAACACGGGTATTTGCCCATGGGTACGGCTGAAA
TACGTCACAATCAAACATAGATCGGAAAATGTGCCGGTGTCTATAAAACA
TATAACCAAATAACTGATTACAGCTTGTTTCATACCATGGCGCAATCCGA
CTATACTACTTGTATAACAGTCAGTTCCTCAAAGCGGGTTTGATTTTAAA
GTTTAATCCCTCTGACTGGATCATAGAATGTTAATGTCTTCTTGTTCACA
ACTGGTAAAGATATCAAAATGCTGCAACTACATAGTAAGTCTCAAGTGTG
AAGCAGAAGAGTAGTACTCTAGGTCTGCTGGATGTGACCTGGAGTCGAGT
CCTGTTAGAAATCTGAAAATGAATCTTAAAAGGGACTTTCTCGTTTTAGA
AAATATCCCGTCTTTGTCAGACAAGTTCCGTTCCCCTTTTGACACGGCAT
TCAAAATTGTCTTTAAAGCCAAAACCTCTATACAGAAATTATAGACCGTT
GGACATGCACGATGGTCTGGACCTTCCATTTATACATATAACTAACTAAA
AGCCTAAAAGCGAACAGCAACTTTGACGAGCAATTTCCTAGCACAGTAGT
TTTGAATTTCTTTGCATCGTTCACTTGAGCCAAAGATCGACAGTTCATAA
CCGTTCTTGTCTTTTAACAGGTTTCAGTTCGTGTCTTCAGACGCCGAGTT
AAGTTACTTTGGAGCTGATCCGCAAGCACACAGCAAATCGTCAACCACTT
TAAAGAAGCTACAGGGTTGAGAATCACCGACTCAAGTTCCAAGATGTCTA
AGATGATGAGGGATGATGCCAAGATTGCTCGGAATCTCTTCTTACAAGGA
ACTGGTCACGTGAGCCGAGATCGGACGAATAGTAATCCCGCGATTATTGG
TCATCAGGGGAGGGCCAACGTCACTTCCGGATCCGGTCCAACAGGTGCAT
CTTCGGTATTGCCACCATCAGAGAGACATTCGAAAGCTTCATCATTCCGG
AAAACCGGAGAGGAAACCGGCAATCCGGATCGTGTGAGATGGTTTCCAAG
CGGTCGACTGGGATCAACAGTGACGTCACGACAACGTGACTTGACGAAAG
CCGCTGATAGGCTGTCGACGTTCTTTGATTGGCCGTCGAGTGCCCAGGTT
CGCGCGGAGCTGTTGGCTAAGCAGGGGTTCTATTACCTTGGGACGGGGGA
CAAGGTTGAGTGCGCGTTCTGCGGAGGTCAACTGCACCAGTGGGAGTTGT
CCGATGACCCGGAAACGGAACACAGCAGACATTTCCCACAATGCCCTCGT
GTGGTCTCAATTCGTACTTATTTCAGATAGACAACTTTCCACAGGAAGGT
CTTCAAGGCGGTTCAAAATCAAATGATATATGATGTGTGTGAACTACTTA
GACAGCCTTTACTATCACTATGTATACGTATCAGTATGAACCCATTAAAA
ATGTTATATAAGTTTCCA Coding sequence (CDS) from alignment at Sc0000003:1012537..1014104+ >transcript:BL87822_cuf1 ID=transcript:BL87822_cuf1|Name=transcript:BL87822_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=537bp|location=Sequence derived from alignment at Sc0000003:1012537..1014104+ (Branchiostoma lanceolatum)
ATGTCTAAGATGATGAGGGATGATGCCAAGATTGCTCGGAATCTCTTCTT
ACAAGGAACTGGTCACGTGAGCCGAGATCGGACGAATAGTAATCCCGCGA
TTATTGGTCATCAGGGGAGGGCCAACGTCACTTCCGGATCCGGTCCAACA
GGTGCATCTTCGGTATTGCCACCATCAGAGAGACATTCGAAAGCTTCATC
ATTCCGGAAAACCGGAGAGGAAACCGGCAATCCGGATCGTGTGAGATGGT
TTCCAAGCGGTCGACTGGGATCAACAGTGACGTCACGACAACGTGACTTG
ACGAAAGCCGCTGATAGGCTGTCGACGTTCTTTGATTGGCCGTCGAGTGC
CCAGGTTCGCGCGGAGCTGTTGGCTAAGCAGGGGTTCTATTACCTTGGGA
CGGGGGACAAGGTTGAGTGCGCGTTCTGCGGAGGTCAACTGCACCAGTGG
GAGTTGTCCGATGACCCGGAAACGGAACACAGCAGACATTTCCCACAATG
CCCTCGTGTGGTCTCAATTCGTACTTATTTCAGATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:1012537..1014104 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87822_cuf1 |
| Biotype | protein_coding |
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