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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87789_cuf0 >transcript:BL87789_cuf0-protein ID=transcript:BL87789_cuf0-protein|Name=transcript:BL87789_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=192bp
CGYRTANRGHLSQHMRTHTGDKPFKCDQCDYSAAQKSSLNKHVLKRTGEK
PYMCGECEYRTAQKSALSDHMKSHTGEKPFMCGECGYRTARKSDLSDHMK
SHTGEEPFVCGECGYRTAKKSHLAQHVRTHTGEKPYMCGDCEYRTAQRSH
LSRHMRTHTGEKLYKCDQCDFSAAKKSSLNSHGVKHTGEKPY Run BLAST on NCBI mRNA from alignment at xfSc0000004:36244..37952+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87789_cuf0 ID=transcript:BL87789_cuf0|Name=transcript:BL87789_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1709bp|location=Sequence derived from alignment at xfSc0000004:36244..37952+ (Branchiostoma lanceolatum)
GTGTGGGTACAGGACAGCTAATAGGGGCCACTTATCCCAACATATGAGAA
CTCATACAGGAGACAAACCCTTCAAGTGCGATCAGTGTGACTATTCTGCA
GCCCAGAAATCTAGCTTGAACAAGCATGTCCTAAAACGCACAGGTGAAAA
ACCATACATGTGTGGGGAGTGTGAGTACAGGACAGCTCAGAAGTCTGCCT
TATCCGACCATATGAAATCTCATACAGGAGAAAAACCCTTCATGTGTGGG
GAGTGTGGGTACAGGACAGCTAGAAAGTCTGACTTATCCGACCATATGAA
ATCTCATACAGGAGAAGAACCCTTCGTGTGTGGGGAGTGTGGGTATCGAA
CTGCCAAGAAATCTCACTTAGCCCAGCATGTGAGAACTCATACTGGAGAG
AAACCCTACATGTGTGGGGATTGTGAGTACAGGACAGCTCAGAGGTCTCA
CTTATCCCGACATATGAGAACTCATACAGGAGAGAAACTCTACAAGTGTG
ACCAGTGTGACTTTTCTGCAGCCAAGAAATCAAGCTTGAACAGCCATGGA
GTAAAACACACTGGTGAGAAACCATACTAGTGTGGGGAGTGTGAGTACGG
GACAACAAAAAAGTATTCCTTATCTGTCCATATTAAGTCTCACACAGTAG
AAAAGCCATTCGTGTGTGAGGAGTGTGGGTACAGAACTACTAAGAAGTCT
CACTTGGCCCGACACATTAGAACACATACCGGAGAGAAACCCTACAAGTG
TGACCAGTGTGACTATTCTGCAGCAGATAAATCCAGTTTGGGCTACCATC
AGGTAAAACACACTGGTGAGAAACCCTACATGTGTGGGGAGTGTGGGTAC
AGGACAGCTAAAAGGTCTCGCTTATCCGACCATATGAAATCTCACAAAGG
AGAAAAAACCTTCAAATGTGACCTGTGTGACTTTTCTGCTGCCAAAAAAT
CCCAGTTGGACCACCATCGAGTAATAAAACATATTGATGAGAAACCTACA
TGTGTGGAGAGTGTGGGTACAGGGCAGCTCATAGCTCCATTTTTGCAGAC
ATCCGAGACCTTATACTGGCGAGAAACTCCACATGTGTGACCTGTGTGAC
TGTTCTGAATCCCAGAAATCCGACACTAGCCATCGAGGAAATCATCCTGG
TGAGAAACCACGCGGGCATGGGGAGTGTGGGTACAGGACTTGACTTATGC
AAACACATGAGAAAACCCCTACAATTGTGACCTGTTTGACTATTATGCTC
TGTAAAAATCGGCTATTGATTTCTATCAAGTAAAACGCCTACTTTTGGTA
ACAAATCCTGCATGTGTGAGGAGTGTCTGTATGGGACAACTGTGAGGCCT
GGCTTGCTTCAATATATGAGAACTCATATAGAAGAGGCATACCGGGCTAT
TCTCCTGCTATACAACTTCTGTATATATTTTGCCTCTTCTATCAGAACGA
GAGAACTTTACAAGCATGCAACACATTGCAAAGTGGATTGTTGAGAAGTC
CATGGATTAGAATAAGATCATTGAAAATATTTCATCATACTAAAACGTAA
AATTGAAGGGCCTTCATTTTACAATTAATGCATGATTTATCTCACCCATT
TTGTTTGAATCTATTCTGCCAAACTCTTTTTGTCAACCTCATGTTTTTTC
CTATTAATTTATAACTTTAAAATTGCAATTATCATAAGTCTTTTGAAAAT
ACTTCTCCG Coding sequence (CDS) from alignment at xfSc0000004:36244..37952+ >transcript:BL87789_cuf0 ID=transcript:BL87789_cuf0|Name=transcript:BL87789_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=579bp|location=Sequence derived from alignment at xfSc0000004:36244..37952+ (Branchiostoma lanceolatum)
TGTGGGTACAGGACAGCTAATAGGGGCCACTTATCCCAACATATGAGAAC
TCATACAGGAGACAAACCCTTCAAGTGCGATCAGTGTGACTATTCTGCAG
CCCAGAAATCTAGCTTGAACAAGCATGTCCTAAAACGCACAGGTGAAAAA
CCATACATGTGTGGGGAGTGTGAGTACAGGACAGCTCAGAAGTCTGCCTT
ATCCGACCATATGAAATCTCATACAGGAGAAAAACCCTTCATGTGTGGGG
AGTGTGGGTACAGGACAGCTAGAAAGTCTGACTTATCCGACCATATGAAA
TCTCATACAGGAGAAGAACCCTTCGTGTGTGGGGAGTGTGGGTATCGAAC
TGCCAAGAAATCTCACTTAGCCCAGCATGTGAGAACTCATACTGGAGAGA
AACCCTACATGTGTGGGGATTGTGAGTACAGGACAGCTCAGAGGTCTCAC
TTATCCCGACATATGAGAACTCATACAGGAGAGAAACTCTACAAGTGTGA
CCAGTGTGACTTTTCTGCAGCCAAGAAATCAAGCTTGAACAGCCATGGAG
TAAAACACACTGGTGAGAAACCATACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000004 | genome | xfSc0000004:36244..37952 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87789_cuf0 |
| Biotype | protein_coding |
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