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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87753_cuf2 >transcript:BL87753_cuf2-protein ID=transcript:BL87753_cuf2-protein|Name=transcript:BL87753_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=244bp
MDTVGDPRNLLRLNRKALVRDIKTINPILDSLFQQGNVTDEELYDIRAET
TPQDKVRRLLDVISSKSTTAYYRFREALKKSYPHLENILHRCPTHNERLK
LYCEVCEHLLCFECKSGHSTHQCTSITAEADDIRTYYASFVRENRKTVAS
VHGKDLTFLEKQRLSCWMADRQKSLEAKIRALIEQESNWFEKKITDRPST
SLSHSSLATSVNPYDDSMAVEHQTLGATCPPYDMYHRAGRVLEK Run BLAST on NCBI mRNA from alignment at Sc0000049:1594514..1597039- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87753_cuf2 ID=transcript:BL87753_cuf2|Name=transcript:BL87753_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2526bp|location=Sequence derived from alignment at Sc0000049:1594514..1597039- (Branchiostoma lanceolatum)
GCATTTTTCAGGTTTGTACACTTGGTATTGTGTACTTGAGTTCGTACATT
CAAGTGTGTTACGCGATTTTAGATAACATACCGGCACTGGGCCGAACACT
TTTGTATTCTTGAAAATTTCACACTTGTAAAATGTGCACACGCAAGTATG
AACGCAAGTCTTACACGCTTGCAAATTGTTGTAATACAACAACGCACAAT
GACTATTTCAAATTCTGAGGAATAGAGAATGATGGCCTTTTTAGTGTGAG
TGAGTCTGATAGTGTTCTGGAATCTAACGTTTTGAGCAAACTAAAGACGA
TTGTGTAAGACTTAAAGTTGTGGCTTGAGGTTGTTTGTCTTTTCCTCTCC
TTCCCAGTCATGTCCGACATCTAAAACTCGCAGGTGCATTGTGTGTGGGT
TTGTTCAGTTCGCTATATCGCTTTCCTTCTGCACACACACCATAGAAATG
TAACAATACAAGTGCAAACATGTGTAATGGTCACCTCATTTCCATGGTGC
AGACTTTACTTTCTGACAGTGCTACGTGACCTCTGTGACTTTCCGCATCT
GTGGAAACCATTGATCAAAATAACATGTCAGAATGGGAACCAATTACACA
TTGTCTTTCTATTTCTGGCTAAGTTTAGGTCCTGTCCAAACTGTGCGACA
TACATAGGCAGCGCAAGTTGCTGACAATTGAATGTTTTCATCCAGCGATT
TGTAAAGAGCAAAGGTCATAAAAACACATGATTACAAAAGTCGCTGTTTT
AGGTATGCCATGCACGGCTTGAATTTGAAACGCAATTTATTTGTTACTCT
CAGGATAGGTAAACTTAATTGAAATTTGTGGTAATATGCTGTATGCACAT
GTAAGTCTGCTGTGTACATTGTTAACCACTTCTCATGTATAACACCAGGT
AACGTTAACACGAAATGGACACAGTAGGAGACCCAAGAAACCTCCTGAGG
TTGAACAGGAAGGCCCTGGTCAGGGACATTAAAACAATCAACCCGATTCT
GGACAGTCTTTTCCAGCAAGGTAATGTTACAGATGAAGAGCTGTACGACA
TAAGGGCCGAGACCACTCCACAAGACAAGGTGCGACGACTGCTCGACGTG
ATCTCATCAAAGAGCACCACAGCGTACTATCGCTTCAGGGAGGCATTGAA
GAAAAGCTACCCCCATCTCGAAAACATTTTACACAGATGTCCCACTCATA
ACGAAAGATTGAAACTGTACTGTGAGGTCTGCGAACACCTTCTTTGCTTT
GAATGCAAAAGTGGGCATTCAACGCATCAGTGCACATCGATAACTGCTGA
AGCCGACGACATTAGAACTTACTATGCATCATTCGTCAGAGAAAACAGGA
AAACAGTCGCCTCCGTACATGGTAAAGACTTGACTTTTCTGGAGAAGCAA
CGCCTTTCCTGTTGGATGGCGGACAGACAAAAGTCGCTGGAAGCTAAGAT
ACGCGCATTAATCGAGCAGGAATCAAACTGGTTTGAAAAGAAAATAACGG
ACCGACCCAGTACAAGTTTATCACATTCAAGTTTAGCCACATCGGTGAAC
CCATATGACGACTCTATGGCAGTTGAGCATCAGACATTGGGAGCCACATG
CCCTCCTTACGATATGTATCATCGTGCGGGAAGAGTTTTGGTCAGTAAGG
GCGCGGTCACATTCGTCGTACGACCTTCGTACGACCTTTGTACGGTCTTC
GTACGATCTTCGTACGATCACAAACTGAGGGCATTCTTTAAACAGTCGTA
CGCGTGCAGTCGTACAAAATTCAGCTGTCTTGTTACCAAATATGTTTTCT
TAGATCCCTGTCGGCGATTGGTTCTGTCACAACCTGCTTTTAAATCGTAC
GACATCAAAATCGCACGACGTCGTACGTCGAATGTGGCCACTCTGTTTTG
TTGCGATAGCCTAAGGATTTCATTTGAGAGTTTATTTCAAGTTTTCTGGA
GTTGATTCCCATAAAACTAAATATAGACGTTGTGTCTATCAGTTATAGCA
GGACATTGACTTCTGAGACATTAACTATTGTACGCTTCATTTTTATATAT
CCAACAATGTTTAATGGTAAACATCACGACTAAGCACAGCAAAACCACAA
AATCCACCTTAGTACATTCATATTTGTCTGTTTGTTTGTTTGTTTTGTTG
TTGCTTTTTGCTGTTGTTTTTGTGTGTTTAATACGCCATCAAAAACACGT
TTTTTTTTCCTTCTCACTACAGAAAAGTAACACCCACTGCACACCATCCA
TCCAGATATCCGACATCGCTAAGCTGATACGAGAAAACGATTGGCTGCCA
CACGACGATCGGACATGCTTAAAACAACTGATTGACTTCATCTTTCACGA
GAAATCATCTCTAACGGTGTGGTATGATGCAGAAGTGACCGTCTACGGAA
AACAGATGGAAGGAGTTACATTTACCGCGGGAGATAAGAGCAATAAGTTT
GTAGCTCACCTTAAGGACGTCCCCGTTCCATCCTCTGTGTCGGCACAAAA
CGGATGGTGTAGTGAGCAGCATGGAG Coding sequence (CDS) from alignment at Sc0000049:1594514..1597039- >transcript:BL87753_cuf2 ID=transcript:BL87753_cuf2|Name=transcript:BL87753_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1470bp|location=Sequence derived from alignment at Sc0000049:1594514..1597039- (Branchiostoma lanceolatum)
ATGGACACAGTAGGAGACCCAAGAAACCTCCTGAGGTTGAACAGGAAGGC
CCTGGTCAGGGACATTAAAACAATCAACCCGATTCTGGACAGTCTTTTCC
AGCAAGGTAATGTTACAGATGAAGAGCTGTACGACATAAGGGCCGAGACC
ACTCCACAAGACAAGGTGCGACGACTGCTCGACGTGATCTCATCAAAGAG
CACCACAGCGTACTATCGCTTCAGGGAGGCATTGAAGAAAAGCTACCCCC
ATCTCGAAAACATTTTACACAGATGTCCCACTCATAACGAAAGATTGAAA
CTGTACTGTGAGGTCTGCGAACACCTTCTTTGCTTTGAATGCAAAAGTGG
GCATTCAACGCATCAGTGCACATCGATAACTGCTGAAGCCGACGACATTA
GAACTTACTATGCATCATTCGTCAGAGAAAACAGGAAAACAGTCGCCTCC
GTACATGGTAAAGACTTGACTTTTCTGGAGAAGCAACGCCTTTCCTGTTG
GATGGCGGACAGACAAAAGTCGCTGGAAGCTAAGATACGCGCATTAATCG
AGCAGGAATCAAACTGGTTTGAAAAGAAAATAACGGACCGACCCAGTACA
AGTTTATCACATTCAAGTTTAGCCACATCGGTGAACCCATATGACGACTC
TATGGCAGTTGAGCATCAGACATTGGGAGCCACATGCCCTCCTTACGATA
TGTATCATCGTGCGGGAAGAGTTTTGGAAAAGTAAATGGACACAGTAGGA
GACCCAAGAAACCTCCTGAGGTTGAACAGGAAGGCCCTGGTCAGGGACAT
TAAAACAATCAACCCGATTCTGGACAGTCTTTTCCAGCAAGGTAATGTTA
CAGATGAAGAGCTGTACGACATAAGGGCCGAGACCACTCCACAAGACAAG
GTGCGACGACTGCTCGACGTGATCTCATCAAAGAGCACCACAGCGTACTA
TCGCTTCAGGGAGGCATTGAAGAAAAGCTACCCCCATCTCGAAAACATTT
TACACAGATGTCCCACTCATAACGAAAGATTGAAACTGTACTGTGAGGTC
TGCGAACACCTTCTTTGCTTTGAATGCAAAAGTGGGCATTCAACGCATCA
GTGCACATCGATAACTGCTGAAGCCGACGACATTAGAACTTACTATGCAT
CATTCGTCAGAGAAAACAGGAAAACAGTCGCCTCCGTACATGGTAAAGAC
TTGACTTTTCTGGAGAAGCAACGCCTTTCCTGTTGGATGGCGGACAGACA
AAAGTCGCTGGAAGCTAAGATACGCGCATTAATCGAGCAGGAATCAAACT
GGTTTGAAAAGAAAATAACGGACCGACCCAGTACAAGTTTATCACATTCA
AGTTTAGCCACATCGGTGAACCCATATGACGACTCTATGGCAGTTGAGCA
TCAGACATTGGGAGCCACATGCCCTCCTTACGATATGTATCATCGTGCGG
GAAGAGTTTTGGAAAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1594514..1597039 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87753_cuf2 |
| Biotype | protein_coding |
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