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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87629_cuf0 >transcript:BL87629_cuf0-protein ID=transcript:BL87629_cuf0-protein|Name=transcript:BL87629_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=635bp
RQVVSQPTRGQATLDLLITNLTSYYSPPTVSPPLGTSDHNLVNFQPKARR
MINRMVKRVHRPMKDSSLRSFGQWIASYDWPEVFTASTACNKSHAMYATL
QAKIDHFFPLKVSRSHHQDKPWLTAEVKSLIHRRQQAFAGNVDSTWKHFR
NKVQRKIRNLKKTYYNSKVKSLKKDNAAKWHKEIKSMINVSRNEPVIHID
GIDPTDKRGIANAINKSLGAVIQSLPAIDAASLPAYLPSFPAPCVQPWDV
YKELLNVKTRKAAGPDGIPGKIIKEFAYELSKPFTDILNTSLQQGSVPDE
WKSAIVVPIPKTKPPVLTELRPISLTSLLAKVAERFVSQWVLSDITPEID
AQQFGCLKGKSTTHCLLDMTNDLFKATDKPGILCSLVSTDFSKAFDRVSH
NVAIQRLLQLGLRPSVTRWIVDFLSNRSQAVRYHGTLSDNLNVTCGLPQG
TLLGPIIFLAYINCAARHAASKRWKFVDDLNLLEIRNPTSSPSNMQQDLN
DLDHWSRTSHMKLHPKKCKVMHVQFRKSHSIPPPLTVDNIEVIQVKVMRV
LGVILQADLKWNSHVDSICTKANQRMYFLKKLKHFHLSIEDLITVYISYI
RPILEYASPIWHPGLPKTLSDKIEKVQRRALRVIL Run BLAST on NCBI mRNA from alignment at Sc0001172:1290..3196+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87629_cuf0 ID=transcript:BL87629_cuf0|Name=transcript:BL87629_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1907bp|location=Sequence derived from alignment at Sc0001172:1290..3196+ (Branchiostoma lanceolatum)
ACGCCAGGTGGTTAGCCAACCCACGAGAGGACAAGCCACTTTGGATCTTC
TGATCACTAACCTGACATCTTACTACTCACCTCCGACCGTCTCCCCCCCG
TTAGGAACGAGTGATCACAACTTGGTGAACTTTCAACCCAAAGCAAGGAG
GATGATCAACAGGATGGTGAAACGTGTGCACAGACCCATGAAGGACTCGT
CATTGCGATCTTTCGGGCAGTGGATTGCGTCTTATGACTGGCCTGAAGTC
TTCACCGCAAGCACCGCCTGTAACAAGTCACATGCTATGTACGCGACGCT
TCAGGCTAAAATTGACCACTTCTTCCCGTTAAAGGTGTCCCGTTCCCATC
ATCAAGACAAGCCGTGGCTGACAGCTGAGGTCAAATCCCTCATACATCGC
CGACAACAAGCTTTTGCCGGGAACGTCGATTCCACCTGGAAACACTTCAG
GAACAAAGTCCAAAGGAAGATCAGAAATTTGAAAAAGACGTACTACAACT
CCAAAGTGAAGTCTTTGAAGAAGGACAATGCTGCAAAGTGGCATAAGGAG
ATTAAATCCATGATAAACGTATCACGCAACGAACCTGTTATTCACATCGA
CGGAATTGATCCTACCGACAAACGCGGCATCGCCAACGCCATAAACAAGT
CACTTGGAGCAGTGATACAGTCCTTACCTGCTATTGACGCGGCATCACTA
CCCGCCTACCTGCCCTCGTTTCCAGCCCCTTGTGTTCAACCCTGGGATGT
GTACAAAGAACTTCTCAATGTCAAAACACGTAAAGCCGCAGGTCCGGACG
GCATACCAGGGAAAATCATCAAAGAATTTGCGTATGAACTGAGTAAACCA
TTTACCGACATTCTTAACACATCCCTCCAACAAGGCTCAGTCCCGGACGA
ATGGAAATCTGCAATTGTTGTCCCAATCCCAAAGACCAAACCTCCTGTTT
TAACAGAACTTCGTCCGATCTCCCTAACATCTTTGTTAGCGAAAGTGGCC
GAGCGCTTCGTCTCGCAATGGGTCTTGTCCGACATTACTCCTGAGATCGA
CGCTCAACAGTTTGGCTGCCTTAAGGGCAAATCGACAACACATTGTCTAT
TGGACATGACTAATGACTTATTCAAAGCTACGGATAAACCTGGGATACTT
TGCTCTCTTGTCTCAACGGATTTCAGTAAGGCCTTTGATCGTGTAAGTCA
TAACGTTGCAATCCAACGCCTGCTTCAACTCGGACTGCGCCCGTCAGTGA
CGAGATGGATTGTAGACTTTCTTAGTAACAGAAGCCAGGCTGTTCGTTAC
CACGGAACACTTTCCGACAACTTGAACGTTACCTGTGGATTACCCCAGGG
GACTTTACTCGGACCAATAATATTTCTAGCCTACATTAACTGTGCCGCGC
GTCACGCTGCCTCCAAACGCTGGAAATTTGTAGACGACTTGAACCTATTA
GAGATAAGGAACCCCACCTCAAGTCCTTCAAACATGCAACAGGACCTTAA
CGACTTGGATCATTGGTCTCGCACGAGTCACATGAAGTTACACCCGAAGA
AATGTAAAGTGATGCATGTCCAATTCAGAAAGTCCCATTCCATCCCCCCT
CCTCTTACTGTTGACAACATTGAAGTTATACAGGTGAAGGTGATGAGAGT
TTTGGGTGTTATCCTCCAGGCTGACCTTAAATGGAACTCACACGTGGACT
CAATCTGTACTAAAGCTAATCAGCGCATGTATTTTCTCAAGAAACTGAAG
CACTTCCATCTCTCCATAGAGGACCTGATCACGGTGTACATTTCCTACAT
TCGGCCAATTTTGGAATATGCCTCTCCGATTTGGCACCCCGGACTGCCTA
AGACCTTAAGTGACAAAATCGAGAAAGTCCAAAGAAGAGCCCTGCGCGTC
ATCCTGG Coding sequence (CDS) from alignment at Sc0001172:1290..3196+ >transcript:BL87629_cuf0 ID=transcript:BL87629_cuf0|Name=transcript:BL87629_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1905bp|location=Sequence derived from alignment at Sc0001172:1290..3196+ (Branchiostoma lanceolatum)
CGCCAGGTGGTTAGCCAACCCACGAGAGGACAAGCCACTTTGGATCTTCT
GATCACTAACCTGACATCTTACTACTCACCTCCGACCGTCTCCCCCCCGT
TAGGAACGAGTGATCACAACTTGGTGAACTTTCAACCCAAAGCAAGGAGG
ATGATCAACAGGATGGTGAAACGTGTGCACAGACCCATGAAGGACTCGTC
ATTGCGATCTTTCGGGCAGTGGATTGCGTCTTATGACTGGCCTGAAGTCT
TCACCGCAAGCACCGCCTGTAACAAGTCACATGCTATGTACGCGACGCTT
CAGGCTAAAATTGACCACTTCTTCCCGTTAAAGGTGTCCCGTTCCCATCA
TCAAGACAAGCCGTGGCTGACAGCTGAGGTCAAATCCCTCATACATCGCC
GACAACAAGCTTTTGCCGGGAACGTCGATTCCACCTGGAAACACTTCAGG
AACAAAGTCCAAAGGAAGATCAGAAATTTGAAAAAGACGTACTACAACTC
CAAAGTGAAGTCTTTGAAGAAGGACAATGCTGCAAAGTGGCATAAGGAGA
TTAAATCCATGATAAACGTATCACGCAACGAACCTGTTATTCACATCGAC
GGAATTGATCCTACCGACAAACGCGGCATCGCCAACGCCATAAACAAGTC
ACTTGGAGCAGTGATACAGTCCTTACCTGCTATTGACGCGGCATCACTAC
CCGCCTACCTGCCCTCGTTTCCAGCCCCTTGTGTTCAACCCTGGGATGTG
TACAAAGAACTTCTCAATGTCAAAACACGTAAAGCCGCAGGTCCGGACGG
CATACCAGGGAAAATCATCAAAGAATTTGCGTATGAACTGAGTAAACCAT
TTACCGACATTCTTAACACATCCCTCCAACAAGGCTCAGTCCCGGACGAA
TGGAAATCTGCAATTGTTGTCCCAATCCCAAAGACCAAACCTCCTGTTTT
AACAGAACTTCGTCCGATCTCCCTAACATCTTTGTTAGCGAAAGTGGCCG
AGCGCTTCGTCTCGCAATGGGTCTTGTCCGACATTACTCCTGAGATCGAC
GCTCAACAGTTTGGCTGCCTTAAGGGCAAATCGACAACACATTGTCTATT
GGACATGACTAATGACTTATTCAAAGCTACGGATAAACCTGGGATACTTT
GCTCTCTTGTCTCAACGGATTTCAGTAAGGCCTTTGATCGTGTAAGTCAT
AACGTTGCAATCCAACGCCTGCTTCAACTCGGACTGCGCCCGTCAGTGAC
GAGATGGATTGTAGACTTTCTTAGTAACAGAAGCCAGGCTGTTCGTTACC
ACGGAACACTTTCCGACAACTTGAACGTTACCTGTGGATTACCCCAGGGG
ACTTTACTCGGACCAATAATATTTCTAGCCTACATTAACTGTGCCGCGCG
TCACGCTGCCTCCAAACGCTGGAAATTTGTAGACGACTTGAACCTATTAG
AGATAAGGAACCCCACCTCAAGTCCTTCAAACATGCAACAGGACCTTAAC
GACTTGGATCATTGGTCTCGCACGAGTCACATGAAGTTACACCCGAAGAA
ATGTAAAGTGATGCATGTCCAATTCAGAAAGTCCCATTCCATCCCCCCTC
CTCTTACTGTTGACAACATTGAAGTTATACAGGTGAAGGTGATGAGAGTT
TTGGGTGTTATCCTCCAGGCTGACCTTAAATGGAACTCACACGTGGACTC
AATCTGTACTAAAGCTAATCAGCGCATGTATTTTCTCAAGAAACTGAAGC
ACTTCCATCTCTCCATAGAGGACCTGATCACGGTGTACATTTCCTACATT
CGGCCAATTTTGGAATATGCCTCTCCGATTTGGCACCCCGGACTGCCTAA
GACCTTAAGTGACAAAATCGAGAAAGTCCAAAGAAGAGCCCTGCGCGTCA
TCCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001172 | genome | Sc0001172:1290..3196 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87629_cuf0 |
| Biotype | protein_coding |
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