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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87602_cuf0 >transcript:BL87602_cuf0-protein ID=transcript:BL87602_cuf0-protein|Name=transcript:BL87602_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=529bp
MRVRGETQILFQKLLESHCVERPFVCNPLSVSSHNNKKRLILDLRYVNFF
VYKDSFRCEDLRSAAQVFKKNEFMYTFDLKSGYHHIDILPGHRNYLGFSW
YLKGCIRYFVFCVLPFGLSSAPYLFTKMMKPLVKKWRSEGKNIFVYLDDG
FGEEFDYDFCSNVASQVCTDLLNFGWLPNPEKCIWEPQQVKVWLGTVVDL
IRFKLFATDKRINKLFSALQETCDVIKRGVFTIPVRHLASMVGQIISLAL
CVGRVSRIRTRYLYYVIESRHTWYSHVVLDEYAVSELEFWLQTLHVLNGF
PIEIHSKPVMRIFSDASSTGFGGYVEEDQNQFVHGFWKQVEQQHSSTWRE
LEAIARVLDNVKVCISGKTVKWFCDSSSAVQIVKVGSVKRDLQDIAMRIF
NTCTMLAINLDIEWIPRKDNDKADVLSKFFDVDDYSVNDSVFQFLNVLWG
PFDIDRFANHLNTKLYRFNSRTWCPNTEGVDAFSFDWRKSNNWLHPPVDL
VPRVLLHMKDCKATGTLVIPLWKSAFFWP Run BLAST on NCBI mRNA from alignment at Sc0000369:133829..136753- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87602_cuf0 ID=transcript:BL87602_cuf0|Name=transcript:BL87602_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2925bp|location=Sequence derived from alignment at Sc0000369:133829..136753- (Branchiostoma lanceolatum)
CTTTTGTGTGTTCTTTTCTTGTGTGTTTTCCTTCTCGTAGACAGCATGGA
CTGACTGGACTCCACAAGTCTTTGTTATGCTAATCACTGGGAGATTCCAG
AAGTTTCGTCGGTGAATCAATTTATGTCCCTACACAAGTTCGACTACGAA
GAAGGACAACCTAAGCCGTCGGTTCGAGGGAGATTGAGGAAATGTTTGGA
TTTTTGGGTAGGGACTAATGCCCCGAATTGGATCTTAGACGTGATTAAAG
ATGGTTACAAGATTTCTTTGAAAGATTTGCCGTCGCAGTCTTTTCAACCT
AACAATGCGAGTGCGAGGAGAAACGCAGATTTTGTTTCAGAAGCTTCTAG
AGTCTCATTGTGTTGAGAGACCATTTGTGTGTAACCCGTTATCTGTCTCT
TCGCATAATAACAAGAAGAGACTCATTCTAGACCTAAGATATGTTAATTT
CTTTGTTTATAAAGATTCTTTTAGGTGCGAAGATCTTAGATCTGCTGCTC
AGGTGTTCAAGAAGAATGAATTCATGTATACTTTTGATTTGAAATCGGGT
TACCACCACATTGATATTCTTCCAGGTCATAGGAATTATCTAGGATTTAG
CTGGTACCTTAAAGGATGTATTAGATATTTTGTGTTTTGTGTATTACCAT
TTGGCTTATCAAGCGCACCATATTTATTTACTAAAATGATGAAACCTCTG
GTTAAGAAATGGAGGAGCGAAGGCAAAAATATCTTTGTGTATTTAGATGA
TGGTTTCGGTGAAGAGTTTGATTATGATTTTTGTTCTAATGTAGCAAGTC
AAGTTTGTACGGATTTGTTGAATTTCGGTTGGTTGCCTAATCCTGAAAAA
TGTATTTGGGAGCCACAACAAGTTAAAGTTTGGTTGGGCACTGTTGTTGA
TTTGATCCGTTTTAAGTTATTTGCAACAGACAAAAGGATCAATAAGTTGT
TTTCAGCCTTGCAAGAAACATGTGATGTTATCAAAAGAGGAGTTTTTACA
ATTCCTGTCAGACACCTGGCCAGTATGGTTGGTCAGATTATTTCTCTAGC
CCTTTGTGTTGGCAGAGTATCTAGAATAAGAACGAGATATCTGTATTATG
TAATTGAATCTAGGCACACCTGGTATAGTCATGTGGTACTAGACGAGTAT
GCTGTGAGTGAGCTGGAGTTTTGGTTACAGACTTTGCATGTGTTGAATGG
ATTTCCAATTGAAATCCATTCCAAACCTGTCATGAGGATATTTTCTGATG
CGTCTAGTACAGGTTTTGGGGGTTATGTAGAAGAAGATCAAAATCAGTTT
GTTCATGGGTTTTGGAAACAAGTAGAACAACAGCATAGTTCTACTTGGAG
GGAACTTGAAGCTATTGCTAGAGTTTTAGATAATGTTAAAGTTTGTATTT
CAGGTAAGACAGTCAAATGGTTTTGCGATAGCTCCTCAGCTGTCCAGATA
GTTAAAGTAGGAAGTGTTAAAAGAGACTTACAAGACATAGCTATGAGGAT
CTTCAACACCTGTACAATGTTAGCTATTAATTTGGACATAGAATGGATTC
CGCGGAAGGATAATGACAAAGCTGATGTACTTAGTAAATTCTTTGATGTT
GATGATTATTCTGTGAATGATTCAGTTTTCCAATTTTTGAATGTTCTCTG
GGGACCTTTTGATATTGATAGATTTGCCAATCATTTGAATACGAAATTGT
ACAGGTTTAACAGTCGAACATGGTGTCCGAATACTGAAGGCGTAGATGCA
TTTTCTTTTGATTGGAGAAAGAGCAATAATTGGTTACATCCTCCGGTAGA
TTTAGTACCTAGAGTGTTGTTACACATGAAAGATTGTAAGGCAACTGGAA
CTTTGGTGATCCCGTTGTGGAAATCAGCCTTTTTTTGGCCTTAACTTTGC
CCAGATGGCACACATTTTGACACTTTTGTACATAATCATGTAGAATTGCC
CAGTAAGAACTTATTTATCAAAGGTATGAGTAAGAATACCATTTTTGGTT
TCAGACAGATTAGAGCACTAGCTCTGCGTATTTCATTTAAGAAATGAGAA
TTTTCGAACAAAGTAAAATGTTCTAAGCGTTGTTTGCTGCGAATAAAGAT
GATGTGAAGAAACATTTTTGTTTGCTGTTTCACTTGTATTGGAAAAAGTG
AGTTTGAGAGAGTGAATATTAAGATTTTCATTGATTTGCAGACTGGGTTT
TTACCAATTTAGGCATTTGGCCATATTGGGGAAAGCAATTTTGAACTTAC
NGGAAATGAGTACTGTTTTAATAGAGAAAGGCAGATTGGGGAAAGCAATT
TTGAAGTTACGTCACTTAACTTAAGTGCTTTTGAAAAAGCTGGTCTTGGC
CTACAACTTGTACTTATTTGTAAAATGTATAATAGGCTCATTATAAAAGC
TATCAATGTAATTATGTACATGGCACGCAATAAAACATAAAATTTGAAAA
AGCACCATTGAATCATCAGCACTATGGTAATTAAGTGAAATAGAAGTTCA
TAACAGCTAAGGTTCTATCTAAAATGACTACCAAATGTCAAACAAATCAA
CAGCTACCTCATCCGTATTATTCTGGTTTCCGCATTTACAACATTTCTTC
CTTATTTTCCTGGGTAATTTTGCTAAAATTCATGAAAATTCCCATAGTTT
TGTGCCGAGCGGCGCCACTTTCCACGTCCGTGTTGTCTGAATGAAGTCGA
TACTGAACAATGGAGCATTTGCTACTGTAACAAAGGATCGCTGTTTTGCA
AACAACATCAAGAGCCTCTGTTTACATCGGGGATAGAAGTTTAGCAGCGA
GTGTTTTGCAAGAATCATCTTACCGCGCATAGGAGCCGCTGCACGGTATT
TTCCATTACAATGAACAGAAAAATTCGAATGCCGGGTTTGGAATCTATGA
AGTCCTGTTCATAAGACAAAGGCCT Coding sequence (CDS) from alignment at Sc0000369:133829..136753- >transcript:BL87602_cuf0 ID=transcript:BL87602_cuf0|Name=transcript:BL87602_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1590bp|location=Sequence derived from alignment at Sc0000369:133829..136753- (Branchiostoma lanceolatum)
ATGCGAGTGCGAGGAGAAACGCAGATTTTGTTTCAGAAGCTTCTAGAGTC
TCATTGTGTTGAGAGACCATTTGTGTGTAACCCGTTATCTGTCTCTTCGC
ATAATAACAAGAAGAGACTCATTCTAGACCTAAGATATGTTAATTTCTTT
GTTTATAAAGATTCTTTTAGGTGCGAAGATCTTAGATCTGCTGCTCAGGT
GTTCAAGAAGAATGAATTCATGTATACTTTTGATTTGAAATCGGGTTACC
ACCACATTGATATTCTTCCAGGTCATAGGAATTATCTAGGATTTAGCTGG
TACCTTAAAGGATGTATTAGATATTTTGTGTTTTGTGTATTACCATTTGG
CTTATCAAGCGCACCATATTTATTTACTAAAATGATGAAACCTCTGGTTA
AGAAATGGAGGAGCGAAGGCAAAAATATCTTTGTGTATTTAGATGATGGT
TTCGGTGAAGAGTTTGATTATGATTTTTGTTCTAATGTAGCAAGTCAAGT
TTGTACGGATTTGTTGAATTTCGGTTGGTTGCCTAATCCTGAAAAATGTA
TTTGGGAGCCACAACAAGTTAAAGTTTGGTTGGGCACTGTTGTTGATTTG
ATCCGTTTTAAGTTATTTGCAACAGACAAAAGGATCAATAAGTTGTTTTC
AGCCTTGCAAGAAACATGTGATGTTATCAAAAGAGGAGTTTTTACAATTC
CTGTCAGACACCTGGCCAGTATGGTTGGTCAGATTATTTCTCTAGCCCTT
TGTGTTGGCAGAGTATCTAGAATAAGAACGAGATATCTGTATTATGTAAT
TGAATCTAGGCACACCTGGTATAGTCATGTGGTACTAGACGAGTATGCTG
TGAGTGAGCTGGAGTTTTGGTTACAGACTTTGCATGTGTTGAATGGATTT
CCAATTGAAATCCATTCCAAACCTGTCATGAGGATATTTTCTGATGCGTC
TAGTACAGGTTTTGGGGGTTATGTAGAAGAAGATCAAAATCAGTTTGTTC
ATGGGTTTTGGAAACAAGTAGAACAACAGCATAGTTCTACTTGGAGGGAA
CTTGAAGCTATTGCTAGAGTTTTAGATAATGTTAAAGTTTGTATTTCAGG
TAAGACAGTCAAATGGTTTTGCGATAGCTCCTCAGCTGTCCAGATAGTTA
AAGTAGGAAGTGTTAAAAGAGACTTACAAGACATAGCTATGAGGATCTTC
AACACCTGTACAATGTTAGCTATTAATTTGGACATAGAATGGATTCCGCG
GAAGGATAATGACAAAGCTGATGTACTTAGTAAATTCTTTGATGTTGATG
ATTATTCTGTGAATGATTCAGTTTTCCAATTTTTGAATGTTCTCTGGGGA
CCTTTTGATATTGATAGATTTGCCAATCATTTGAATACGAAATTGTACAG
GTTTAACAGTCGAACATGGTGTCCGAATACTGAAGGCGTAGATGCATTTT
CTTTTGATTGGAGAAAGAGCAATAATTGGTTACATCCTCCGGTAGATTTA
GTACCTAGAGTGTTGTTACACATGAAAGATTGTAAGGCAACTGGAACTTT
GGTGATCCCGTTGTGGAAATCAGCCTTTTTTTGGCCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000369 | genome | Sc0000369:133829..136753 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87602_cuf0 |
| Biotype | protein_coding |
|
