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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87472_cuf0 >transcript:BL87472_cuf0-protein ID=transcript:BL87472_cuf0-protein|Name=transcript:BL87472_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=448bp
GNRHLTNNYRPISLLSIVSKVLETLVNKRLTAHVNPILTDHQSGFRPLDN
TTLQLARIIEEWTEALDDGEIVGCVFLDLRKAFDKVWHAGLLSKLRAYGI
SGSMHNWFPSYLFERRQRVVIQGVASDWKSPLAGVPQGSVLGPTLFILYI
NDLATSCIQSQPNLFADDTSLSSSHHSIQRVVASLNRDLSSVSTWLSQWK
LEANIDKCKAMFITTRAIPQPIPPVTLGGTVLQVITSHKHLGVTLTNTLS
WSNHIDIISTKARRSSGLLCALRKKIPKDLLLRLYMTIVRPNLEYADVVW
SVLTKRDQRIVESVQYQTTRIISGHFGLPYPSYESLYTELSLPSLQYRRK
IHTTVTLYRLLNGRCPPHLQSLLPRTRAPDTNSRYPLRNSEHLTIPAFKT
TRSQRTFLSRAISLWNSLPGNIRTSLTVSSFKNKLYTSLGNKYSVNND Run BLAST on NCBI mRNA from alignment at Sc0000464:47395..48835- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87472_cuf0 ID=transcript:BL87472_cuf0|Name=transcript:BL87472_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1441bp|location=Sequence derived from alignment at Sc0000464:47395..48835- (Branchiostoma lanceolatum)
GGAAACCGACACCTAACAAACAACTACAGGCCTATATCCCTACTTAGCAT
TGTATCAAAGGTTCTAGAAACCCTTGTCAACAAACGTCTAACGGCACATG
TCAATCCAATACTGACAGATCATCAAAGCGGATTCAGACCTCTTGACAAC
ACTACGCTACAGCTGGCTCGAATAATAGAGGAATGGACTGAAGCCTTGGA
TGACGGAGAGATTGTGGGATGCGTGTTCCTTGACCTTCGAAAAGCATTTG
ACAAGGTCTGGCACGCAGGACTGCTATCCAAACTTAGAGCGTATGGAATC
AGTGGATCCATGCACAACTGGTTTCCCAGCTATCTGTTTGAGAGACGCCA
GCGAGTGGTCATCCAGGGTGTGGCATCAGACTGGAAGTCTCCCCTAGCCG
GAGTACCACAGGGTTCTGTCCTCGGACCGACGCTTTTCATACTCTATATC
AACGACCTTGCCACTAGCTGTATACAATCACAACCAAATTTATTCGCCGA
CGACACTTCACTGTCCTCCTCCCATCACTCTATCCAACGTGTAGTTGCAT
CACTGAACAGAGACCTGAGCTCTGTGTCTACCTGGCTGTCTCAATGGAAA
CTTGAAGCCAACATAGACAAGTGCAAAGCTATGTTCATCACGACACGTGC
CATTCCACAACCAATTCCTCCCGTGACCCTAGGTGGAACTGTATTGCAAG
TTATCACCAGCCATAAACACCTCGGCGTTACCCTCACAAATACCCTCTCC
TGGTCAAACCATATCGACATCATCTCTACAAAGGCTAGACGATCTTCTGG
TTTGCTATGTGCTCTGAGGAAGAAGATACCGAAGGATCTCCTCCTCAGAC
TATACATGACAATCGTAAGGCCAAACCTCGAGTATGCAGACGTTGTCTGG
TCTGTTCTTACCAAACGCGATCAAAGGATTGTGGAATCCGTCCAATACCA
GACCACCAGAATCATCAGCGGCCACTTTGGGCTACCGTATCCTTCATACG
AAAGTCTCTACACCGAACTATCACTACCGTCACTCCAGTACCGACGCAAA
ATCCACACAACTGTGACTCTCTACAGACTTTTGAACGGACGCTGCCCTCC
GCATCTACAAAGTTTGCTGCCCCGAACACGTGCGCCTGACACCAACTCCC
GCTATCCCCTTAGAAACAGTGAACACTTGACTATTCCAGCGTTCAAGACT
ACCAGATCCCAGAGAACATTTCTTAGTAGAGCGATTTCACTGTGGAACTC
TCTTCCTGGTAATATCCGAACATCACTCACCGTCAGCTCCTTCAAAAACA
AACTCTACACATCACTCGGCAACAAATACTCTGTAAATAATGACTGAAAT
ATTTGATATATGTATTGTATAACCAAGTACGTAATGTAAACCTAAGTTTT
AGCTTTGCGTTGTCAACGATTTTATATATAATTTAGTCTCG Coding sequence (CDS) from alignment at Sc0000464:47395..48835- >transcript:BL87472_cuf0 ID=transcript:BL87472_cuf0|Name=transcript:BL87472_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1347bp|location=Sequence derived from alignment at Sc0000464:47395..48835- (Branchiostoma lanceolatum)
GGAAACCGACACCTAACAAACAACTACAGGCCTATATCCCTACTTAGCAT
TGTATCAAAGGTTCTAGAAACCCTTGTCAACAAACGTCTAACGGCACATG
TCAATCCAATACTGACAGATCATCAAAGCGGATTCAGACCTCTTGACAAC
ACTACGCTACAGCTGGCTCGAATAATAGAGGAATGGACTGAAGCCTTGGA
TGACGGAGAGATTGTGGGATGCGTGTTCCTTGACCTTCGAAAAGCATTTG
ACAAGGTCTGGCACGCAGGACTGCTATCCAAACTTAGAGCGTATGGAATC
AGTGGATCCATGCACAACTGGTTTCCCAGCTATCTGTTTGAGAGACGCCA
GCGAGTGGTCATCCAGGGTGTGGCATCAGACTGGAAGTCTCCCCTAGCCG
GAGTACCACAGGGTTCTGTCCTCGGACCGACGCTTTTCATACTCTATATC
AACGACCTTGCCACTAGCTGTATACAATCACAACCAAATTTATTCGCCGA
CGACACTTCACTGTCCTCCTCCCATCACTCTATCCAACGTGTAGTTGCAT
CACTGAACAGAGACCTGAGCTCTGTGTCTACCTGGCTGTCTCAATGGAAA
CTTGAAGCCAACATAGACAAGTGCAAAGCTATGTTCATCACGACACGTGC
CATTCCACAACCAATTCCTCCCGTGACCCTAGGTGGAACTGTATTGCAAG
TTATCACCAGCCATAAACACCTCGGCGTTACCCTCACAAATACCCTCTCC
TGGTCAAACCATATCGACATCATCTCTACAAAGGCTAGACGATCTTCTGG
TTTGCTATGTGCTCTGAGGAAGAAGATACCGAAGGATCTCCTCCTCAGAC
TATACATGACAATCGTAAGGCCAAACCTCGAGTATGCAGACGTTGTCTGG
TCTGTTCTTACCAAACGCGATCAAAGGATTGTGGAATCCGTCCAATACCA
GACCACCAGAATCATCAGCGGCCACTTTGGGCTACCGTATCCTTCATACG
AAAGTCTCTACACCGAACTATCACTACCGTCACTCCAGTACCGACGCAAA
ATCCACACAACTGTGACTCTCTACAGACTTTTGAACGGACGCTGCCCTCC
GCATCTACAAAGTTTGCTGCCCCGAACACGTGCGCCTGACACCAACTCCC
GCTATCCCCTTAGAAACAGTGAACACTTGACTATTCCAGCGTTCAAGACT
ACCAGATCCCAGAGAACATTTCTTAGTAGAGCGATTTCACTGTGGAACTC
TCTTCCTGGTAATATCCGAACATCACTCACCGTCAGCTCCTTCAAAAACA
AACTCTACACATCACTCGGCAACAAATACTCTGTAAATAATGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000464 | genome | Sc0000464:47395..48835 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87472_cuf0 |
| Biotype | protein_coding |
|
