|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87441_cuf0 >transcript:BL87441_cuf0-protein ID=transcript:BL87441_cuf0-protein|Name=transcript:BL87441_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=113bp
MIRLIGPNDRNRSMMIFAPRIGHFHTAISAANSTAQIGCDTVYLSRPSDV
YPQRLIRERRVYSKVSQRLQSPFAKVPLFGSTRSCVGRSQTHCHRMDHIS
RLVFPQSHELYPV Run BLAST on NCBI mRNA from alignment at xfSc0004941:98..1559- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87441_cuf0 ID=transcript:BL87441_cuf0|Name=transcript:BL87441_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1462bp|location=Sequence derived from alignment at xfSc0004941:98..1559- (Branchiostoma lanceolatum)
GTAGCGCAAGAGAAGGCACAGTGGAGTTAGGGGACACTCAAGTGGCCAGA
ACAGTCCGCCAACAGCCAAGGCTTCACAGACGTTCCGGCTGAGTTAGCAT
TTAAATGACAGAAGGCGGATTGTCACTTTTTGCCGCAGGACACGGAAAAT
CCCTCGGACAGTCAATTAATTTGTGGTGATAATGACCGTGTTGTCTTGTT
GATCCCTCTTCACGCCTATTCAGAGTGCCGCCTTTTCTCTTCTGTAGTCC
GGTAAACGCGGACGATTGAGAACATGAATCTGCATGTGTATTAGGGCTGT
GGTTCGGCCAATCACAACCCCGGGCTCCTGCCGCACAAAGGCATTTAGTC
TCGGGTGCCCATCTGCTTCGGGTTCGATACCGACAGCGTCAGGGCGACAA
CAGAAGACTGGAGCGGCCGTTCTCTGCCCAGTGGTGGTGAAAAACTGTGG
AATCTGTCGTCGCGAGAGGGTTTCCAGCCAGCCGAGTCGGTGCTGGGCAG
GTTTACGAGGGAGTGCTTGTGACGTCGGCCGAGTGCAATAGTAGAGAGCT
TGCCAGGGACGAGGATGGGGCTGTTAGCGCGGGCGCTACTGCTCTTCTGT
CTCCTGGAGGTAGTCGTGTCGCAGAGAGACAGAACCAGCATACGGGTGAG
TGTGTGGCACACGTACTATCTGATCCTGGTAGTGATTGTTATTTGCTTGA
GGGCGAGGTGTAGAAAAATCCGTCCATGCTGTCCTCCCTACCTGCCGGCC
CCCTACCGCAGACCGGGGCCATGTGTTCTTGTTGTAGCCGTTATCAAAAA
CCCAGTCTCTTTAACTGTGCCTCATCTGCGAATTGAAATATGTGCACGAG
ATCCCAGAAGGAAAATATTTACCAGTAAACAGGCGAAGCACACGGGGCAG
GCTGCCGAGTTGTGCGCGAACACGGCAGCCCCCGGACGGGAGGAGTTTTA
TCATGATCCGCCTTATCGGGCCCAACGATCGGAACCGATCGATGATGATT
TTCGCACCTCGTATCGGCCATTTTCACACGGCGATATCGGCCGCCAACAG
CACGGCTCAAATCGGCTGCGACACCGTTTATTTGTCCCGTCCCTCCGATG
TTTACCCACAGCGGCTGATACGCGAACGCAGAGTTTATTCTAAGGTCTCT
CAGCGGCTCCAGTCGCCCTTCGCCAAGGTCCCGCTTTTCGGGTCGACAAG
ATCTTGTGTCGGACGTTCCCAGACGCACTGCCACAGAATGGACCACATTT
CTCGCCTTGTTTTCCCACAGTCCCATGAATTGTATCCCGTATAGGGGGTC
TCTATGTAGTTATATCGACTAATGGTATTTAGATAACGTAATTGTGTTAA
TATGTATGGAAGGAGCATAGCCATGACATTATCCCTCTAAGACATCTACA
TCTTGACAGGCAGGGGTGTATTATACAGCATTACTGGTGCTGTGGACATA
ATTGTTCTGCTA Coding sequence (CDS) from alignment at xfSc0004941:98..1559- >transcript:BL87441_cuf0 ID=transcript:BL87441_cuf0|Name=transcript:BL87441_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=342bp|location=Sequence derived from alignment at xfSc0004941:98..1559- (Branchiostoma lanceolatum)
ATGATCCGCCTTATCGGGCCCAACGATCGGAACCGATCGATGATGATTTT
CGCACCTCGTATCGGCCATTTTCACACGGCGATATCGGCCGCCAACAGCA
CGGCTCAAATCGGCTGCGACACCGTTTATTTGTCCCGTCCCTCCGATGTT
TACCCACAGCGGCTGATACGCGAACGCAGAGTTTATTCTAAGGTCTCTCA
GCGGCTCCAGTCGCCCTTCGCCAAGGTCCCGCTTTTCGGGTCGACAAGAT
CTTGTGTCGGACGTTCCCAGACGCACTGCCACAGAATGGACCACATTTCT
CGCCTTGTTTTCCCACAGTCCCATGAATTGTATCCCGTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0004941 | genome | xfSc0004941:98..1559 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87441_cuf0 |
| Biotype | protein_coding |
|
