transcript:BL87387_cuf1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL87387_cuf1
Unique Nametranscript:BL87387_cuf1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL87387_cuf1

>transcript:BL87387_cuf1-protein ID=transcript:BL87387_cuf1-protein|Name=transcript:BL87387_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=375bp
MAHQRSKRSRGAFFEDDEEEFVASGKGVNENLVNETIDMSKLWRNPDAVF
PKPGPPRRHSFEEDTTSQGEGGDRFRRHSGRSAEVNAAAEAAEARAQGRA
PPRRTSRASEDAEEQDRQAVRGRPGLARQSSQTGRKGSQNDANLGKPWGL
PRTDRGKPQQTMGPSDPNASLGEIIWSSLLAIDLTLSKTISVCANRSDSN
LRHILMFLEFSCHGLPWIVGTLFMLYKSTSILQVQKLVNLFAALILDLFI
VGTVKAMVRRKRPPYNEGDMFATVSIDKFSFPSGHATRSAMVVSFLIGNW
WMPLAIKHFLVLWAFAIAMSRVMLGRHHVSDVVSGVVIGLVQYRIVSFLW
FSPWFCQMLVWPFLGTLKSPIAVGL
Run BLAST on NCBI

mRNA from alignment at Sc0000156:699156..710461+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL87387_cuf1 ID=transcript:BL87387_cuf1|Name=transcript:BL87387_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=11306bp|location=Sequence derived from alignment at Sc0000156:699156..710461+ (Branchiostoma lanceolatum)
CGGCGGAACCGTTACCTTCGCGGACGCCCTGAAGTAAGGCGTGCGGTACT TCAACACAACGTCTGAGTACTCCTCGATAATCGTCGGTGTGGTGTCAATA GAAGCGTGTAGATCGGTCACAGAAACCTTGAATTTACACGCAGGACAGCG GTTACACCCAGCGCTGCTCTGAACGCACCCCATCCTCGATGTACCAAAAG GATCTCGCTGGACCAGCAAGGACAGAGGGAGCATCGGGCCACCGGCCTAC ATAGTCCCGCGGGGAGCACCTCAGGCGTACGGTGATTTTACCGGCGTCGG GATCGGTGCTGTAGAGTCCGTAAAGACACGACGATTCGGGGAAGAATGTG CCACCCGTGTCGGCCGTACGACAGGAAAGTGTCCCTCGATGTCTCGCCAA GCATCGGCACTCGCAGAATGTGCGGTATACACACATCGCCATGTGTGTAA CTCTAGCATTGCTATATTTGGCCAGGAGAAATGCTTGCCATCGCGTTTGG TGCCAGCTGATAGCGACAGTGAGCGCCTGATATTTTTCCCCGACGGGAAA TGCAAAGCGGATGAACAAGAAGCGCGTTTTGGCCACTGATAAGACCGCTA TAGTGATGGCTGCTCTTTGCCAACGTTGTGGGTAATCATATGTGAGGGGT TTCGCCGATCAGCTGGTTTTTGCCGCGAAATTTGCACGTTTTCCGGTGAG AGAACGTCAACTTCCGGTATTTTAAACCGTCCCACAAAACCTCGCGGTAC AGTGCGATCCAACATGGCAGCCACCGGCTAAAAATAATCTTCCCCTCGTG TCGTCTGTGTTTTATTTCCAAATTTAGCCCCCTAGGAGCTGTTGTAGAGG TGGACTTGGACCTGACAAGAAAGATGGCCCATCAGAGAAGTAAAAGGTCG CGAGGAGCGTTTTTCGAAGATGACGAGGAAGAGTTTGTTGCGAGTGGAAA GGGCGTGAACGAAAATCTCGTGAATGAAACTATTGACATGAGTAAGTTAT GGAGGAACCCTGACGCAGTGTTTCCCAAGCCTGGCCCTCCGCGTAGGCAC AGTTTTGAAGAGGACACCACGTCGCAGGGGGAGGGCGGGGATCGGTTTCG ACGCCACAGCGGCCGGAGCGCCGAAGTGAACGCGGCTGCAGAGGCGGCGG AGGCCAGGGCACAAGGCCGCGCCCCCCCTCGGAGGACCAGCCGGGCATCA GAAGATGCAGAGGAGCAGGACAGACAAGCGGTCAGGGGAAGACCTGGTCT GGCCAGACAGTCCAGCCAGACGGGACGGAAGGGGAGTCAGAATGATGCCA ACCTGGGGAAACCCTGGGGACTGCCCCGTACAGATAGGGGAAAGGTACGT GACACTCTGACACTCTTCATTGGAATTCAACAATGAAGAGCGGTCTACAC TGGAGCAGTCCTACCTGACCGAAAATTCTACTCTACTCTACTCTACAAGT TGAAGTTATATTCGTTTGTTCCATCTCCTTGCAACATGACTTGTGTACAA ATTGTGTGACATTGGCACATAAAGGAAGTTATATAGCTAAAGTCAAGTTC TATAACGTTCTGGAGGAAGGAAGTCCGACCTAACTCAAGCAGCAAACATT TCAACCCATTGCTAGGAGATAAACTTTCAGAATCGAGTTTGATAATCCTA GATTAATTGCTGTAAGTAAGTACAGTGTAACTCGCTGCACTACTGTAGCA TTTCAGTTATCCATGTTGCTATATGCCAAGATTTTGTTTACTAGCAACAT TAGTTATCTGTATGCAGTCTTTGATCCCACAGAGATTGGGATCAAATTTC AACCATGTAAAGTAAAGCAGCTTAAAAATAGTCGACAGTGGCATAGCTTT TCCGTATGTTTGATATGAAGGTAAAATGATTGTTATATTATCGGGATAGC CATTAGGCATTGAGATTGATGGAGTAACAGCTAGGTCCCCCATTGGAGTA GCCCGGAGTCCAGCCTTGTTAGCTTTGGTCTGCTACCCCGCCAACGTAGC GACGTTGGGAGTGGACCAGAGGTAACAAGGCTGGACTCCAGGCTACCATA GGAGGGGATGGTCTATCTTTGAAGGTTGGAGGTTTTAAATTTGACCAGAA GTGCAAAGAGTTTGTGGGTAGCGAATATAGACGATTGAAAAAAAAAAACA GTTAGGGAAGGAACAGAAATGGGCTCTGCACCTGTTACTGTTTAAGTAGG TCATAGGTGTCACAAATATATGTTATTTGAGTGACAAAAACAGATGTTTT ACCACTACTGCAGTGATGAGTATCAATTCAATCAACAGCCTGTTGATAAT GTACATACCGGATATTAGTTCATTACAAGTCAAAATTAGAGAAATTACAA AGATAGGTCTATATGTAGTTCTGTAATGGTAAGTAATCAGAAGATGTTAG TTATTACAGTTTACTACATTTGATTTTGTATAATTTTCAGTTTGCCAAGT GTAGAAGTTTTTGTTGTTTAGTGGACTCCAGGTAGAATTGTGTTTCTCTA TGTAACACTAATGGAGATCTCAATAAAACTAACAAACAAACAAACAGTTG TTTTCCCCCTTCTCTTCCAGCCACAGCAGACCATGGGTCCGTCTGATCCG AATGCCAGCCTGGGGGAGATAATATGGAGCTCACTGTTGGCTATTGACCT CACCTTGTCCAAGGTACTGAATGTACATCCATAGACAGACAATGCATTGT TTGTGCAACAAAATGTTCTACAAGCTTGTCAAAAGCCAGTAGGAGCAGTA TTTGAGGCACTTAAGGGACAGGTGGCCACTATAGACAAGGTTCTTCTATT GCAATGGAACGAATAATCCAAGGAACTACCAGAGAGTGGCCAGGTGGTCC TTATGCAGAGATTGAGACTGTATTTGTAAGAGGGGGAAATGGAACACTTC TAAAGTAGCATATGATAACTCGCAGAGTGTACAATTCATCTATATTCAAA TCAATGCCTCAAAAGGGCAAGTTCGTGTACGTGTAGGTACAGACCATGTA TATAGTCCTTCAGGGTAAAGATATCCTACTTGAGGTGTCATAACTGGTGT CATGAATGTACCATAGAAAGAAATAGTTCTCTAAAGAAGTAGTAAACTAT TTCTTGCTATGCCACAAAAGATCTAAGTTCTATTCCTTTGTCCCTCGTGC CTCCCCACAGACTATAAGTGTCTGTGCGAATCGCTCGGACAGTAACCTGC GCCACATCCTGATGTTCCTGGAGTTCTCGTGCCACGGGCTGCCCTGGATC GTCGGCACGCTCTTCATGCTGTACAAAAGCACCTCCATCCTGCAGGTGCA GAAACTCGTCAACCTCTTCGCAGGTAAGGAAGGAGATTAGATAACAAGTT GGTACCATATTTTCCTGATTAAAGTGCGCACCCCAATTAAAGTACGCACC CCTGATTTGGGCTTACTTCTGGACAAATTTGCAGAACTGAAACGTCAAGT GGAAAACCCCAAATAAAGTATGCACCCCTTCTCCACTGATCTTGAACAAA TTTTGAACAGGATACATTCAAATTTATGGTGTTCCTCCTATTATCTGCAG GTCATTTTTCTTATATCAAGGACTTCTACATAATGCCATTCCTTAGATTC ATTAAAGATTCTCTTGTTTACTCTGCCAGCATCGTCTCTGCAAACTTGAG GATTGCCTACGACAAGTTACAAACTTTGCAAATTGGCAGGTATTGAGCCG TGCATTGTTGCACAGCAGCTGGGTTCCTGGTTTGATTAAGCAAGGGTTTG AGGTCCTTTACCAATTTGTCCGGGCAATAACCTCAAATAAAGTATGCACC CTGACTTTAGGAATGACTTGTGGTGCCTTTTGAATTTTGAAATGTTTAAA AAGTGTGTATTTTATTCGAGGCAATACGGTATATGAAGTATTTTAATGTG ATGTCCTAGGGACCATGCGCCTAGCCTCCACCAGGCCTTCCTATGGCGGT ATGTATCGTAGAATTTGGCGCACAGGAGAATAATTGGCCAGGAGAGTCAG TCCGCCGGATGCTTAACATTCCCGCCTTAGACTAACATGCGCGGCACGTG GCGTTCACGTGGTAAACGCATGGCCATTATGTTTTGCTGTGCAAAAATTA AAGAGATGGCTAAGGATCATACTTATGATGTTCTTTATTGCTCATGAGAA CAGGCTTTGGCATAATACACCGCGACATGTGGACATGAGCCAAACCGGAC GTAAATAGGTTCTGCACGTAAATAGGTCATGTTACGTTACCAGTAACTGT GCCTGCAAATGAAACCCTATGGTGGCCAAACTCCCCTGGCAAATATTCTT TTTTTTGAAATAGATTATCTAGTACTATTAATTATTATCATTTTTTTTCA TTCAAATTAATTAAACTATACATAAAGCACCATCCAGCAAATCAATTCAA GAAACCACATAATATCATATAAATATTGTTTGTACCTATACCTACAGTAG TTAGTCTGGTAGAGACTAGGGACCACCAACAGATATTTACATTTCAGTGA ATCATAGTTCAAGAATTTGGAGATCTTCTGACCCTCCCAAATAACCTGTA TTAAGTATAGCCCACAGAGGAGAATACCAGAAGAATACATAAAAACTTGA GAAACTTGGTGAATTGAAATGCATATCAAGGACACCAACATGGCTGGCAG TCAGCACCGGCCCACTTTATTGATCTGGAAAATTGATTACTTCTATAACT CATAAGGGAATGCATGATGTAAAAGAAAAAAAGGGCACAACAAACTTGTC CCAAGTACTCCCTTGAAATGAATTTATTTTAAAAAGTTGGAACCTTGAGT TTGGTTGATTATATCTCTGTTGTGCAATAAGCGCCAGGACTGATTACTTG AGTGGGTCACAAAATTGAAGCAAGCATAAAGTTGCAGCAGGACAAAGTTA CTTCTACTAGTATCACATAGCAAAAAGTATCACGTGATCAAACTTGCCAT ATCAAAAGATTACCCAAAGTAGGTAATTTTTCTCTGGGAAGCTCACCACC CTTTCCTGATTACCATCAAAAGTCCCTTTGGAACTGCTGTAAGGTTCTGT AAAGTGGTGTAAAACGTTCACCCATGAATGCCTGTGCATTAAGCAACAGA GATGATGGGAGATAATCTTTATAGCTTTTATTGCAGTGAGTAATGGCCTG AGGCCTTGAGGAGTTTACTTGGCATACTGATGTTACTTTGGACACAGATC CTGAGCTGGAAGAGTTATCTCGGTCCCACGAGTTGTTCCAATTTTCCACC AAATTAGATAAAGTACAAGATGTCAGGTAGCAGACAACTTGTGAAGATAG TGGAAAGATTGTAGTCCACAATAATGCAGTACGTTGACTCGTGTATATTT CCTTAGCTTGTTTGAAATCCCAAGTGGGAAAAGAAGGATATTCAAGTTGG CCACAGGAATTTGACTTCTTGGTACTCAATTTGAACTCTTTTGCAAGAGA ATGATGAAGGCAGGTGAGGCAAAAAACACATCCTGTTATAGACCCAATTC TACCACAGAAGCCACAAAGTCAACATATGTTAAATGTGTTCAAATTAACG ATGAATATGTGCGTTGACGAATGGCAAAAAAAGTGAAATAACTCAAAGAA CACAGTGTTCTAGTGTTGGGGACAAAATACGATTATTTTGGTATTTTCAT ATTTTGAATGCTATGTTATGATATTTCAATTTTTTTTCAAATCAAAGAAA AATGAAGCGGCGAATCCAAGAATCAAGAAATTGAATAGGTGTATCTATGA GTATTGGCCCAGTCAATATTTCTCTTGATTTTTATCCTAACCAACTTCTT ATTTGAGAGGTATTGTCAGATGAAAAGCAGCTATTTTAGGTATAAACAAA TAATTGGAGGGACAAGACTGCTTCCAACTCAGGTTAAAGTCTAAATGTAA GTTACTTCCCACTAAAGTATTAATGGATTAGCCCTATTGACCTTTCAATG TCAAAGTCAAAATATCTGTAGGAGCTGATCATTGGCAAGAATCCATAGAG ACACTTAGTCGGATATTCCACAGCTGAATACTAAGCATTTTGTACATGCT GACAATTCAAATGTGTCATTTTCAAGTCAGATTAATGCTGTGTTTTACAG AATTAGAGTATACTGCAATCCGTTTGAAAAAGTCTGGTGATTTTAACTTC CCTTTATGACCCCTTCCCCATGTGTCAGCAGTGATAACTGTATAACATGA AGTTGCCAAACTACAGAAAAATTCACTTTTTCTTGCGTTACAGAACGCAA TTTCAGTGGCCATTCAGTTTGAATAAATCATTGAACTTACCAAATTTGAA AAGCAGTCAGATAAGATGCACTGTTTTTTTTAATCATCTATGTTTTTCGA TGTTACTGTATTTTGATCAACAACAAAAATCCAATGTATGTGAAACACAT TACTCATATTTTTGGCCCAAGGGAAAATGAAACAGTGCATGTATAGACCA TATGTTGTCAATTTCACAGAAATTGGATTTACTCTCTTTCCAGTTCCACC CTGGTTTTACAAGCATTTCTTTAACTCTAGATATGAATATAGAATTTTCA TGTGATTCTGCAAACGTAGCTCCAAATCATACCCAAGGATTCATGTTGCA AACATGTATTGGTTGGAATTGTTCCAGATGGGAAATCTTCTGATACTGTA AATGCATTTAAGTTCGTGTGGTTTTAATTTCGCGGTAGGGAGAAAATGGA GTGTTTGCAGTGGTCTTAAGTTTGCATTTGAGACAATAGTATCGGTACTG ACAGTAGACAAGGGGTTAGGAGGGAGAAAACATTTCCCTCTGGTTTTAAG TTCGCGGCAAAGAGCTTACCGTGAAAACCCGCAAATATGAAACCACCGCG AACATTTCTGCATTTAACAGTACTACAAATCCATAGTGTTCATTTTGATG TTTGATGCATTCTGCTAGAAAAAAAGAGTTATTCTCAGATAATACGTTGC AAATCAAGTTTGTGCTAACAAGTCCATACATCACAAGTAATGACAACGAA AAGATACCTGCATAAGTCACATGTCACAAACAAGGCTTAGCGTCTTCTTG GCTAATCAGTTACATGCAAATATTTGCATTTTTGTCATAGTTGGCAACTT GTGGCCTTGTTACGTACATTTCCTGTATGATTCATACATGTCAGTACAGA TAACCATAAGTCATATTTGCTTGACAGCAAAATAATCATATGTCAAGTCA TGTTTTTATTTCATGAAGATATTACATGAGTATTAGGGGTGGGTACCGGT ACCGTGTACCGGTACAAAACCGGTATTTCTTAATGGACCGGTCCAAAAAA AAACGGTCCGTAAAAAATCAGTGGACCGGCCTATGGACCGATTAGAAAAT TCATAGTACCAGGCGGCCACATAACTGGTCTAAGAAAATACAAAACAGCA GATTTAACTTCATTTTCAAAGACGTTAGCTGTGAATCATACCTAGAAACA CTTAAAGGATTAGTAAACAGACGGCGAGAAGAGTATAATTATAATTTTGA GACAAAGTGCAAACCTAAGAAATTATATCGTTCCAGACATGACGTTTGGA GACTTTTGCGTGTGTCTCGCTCTCCAAAATATGATGTACTGCGACACTAC TATAATCAGGTACAGGTACAGGTCCGGACCTGGACCTGACCCTCTGGACC TGGACCTGGACCGGACCTGAATTGTTTGTACCGGTACCCACCCCTAATGA GTATGATTGATACAGGAAGTTGCAAGGATATATTCACACTGTATATTACC ACTTACAAGGGATTATAAAGATAGAACTAGAGTTCCACGACCTCATACCT TCGCCAAATGATTTTAACCTTTATGACTGATGTATTAGGAGTGTTTCTCA TCAATTATAAATCATACCAGTTGATTGTCTTAAAATATAACATGTCCAAA GTATGAGCTTAACAAATTATGAGCTCAACAAAGAAGGTTATGCTAATATT TTTCATTGATTATGCAAATGAGGCCCTTATTAGCATAATTTGATTCAACG ATGTTTACATTCACATAACGTCCCGATGCCAAAAAAAAAAGTATTGAAGG TATGAAATTGCCATAATTTGCCAGTGTGGAATTAGAGAAGTTACTCATTA AGTATGCAAATTAGCCCACATTAGCATATTTTCTATCTATAAACATTTCT CTCTTCCTCAGTTACAATTTCAATAGTCATATCATGGAACAAAGCGGATT TTTAAAGTTGCCTCATTAATTATGCAAATTAGAATCTGATTTGCATAATT ATTGCCCAATCATACTAAGCATCACACAAGCTATCTACATACCAAAAATA ATGACCATCCATCAAGCCCATCTTGTTATAGTATTTCCTCATTAATTATG CAAATGAGGTCTTCATTTGCATAGTTCATATCAATTAATATTTCTCTCTT CCTCAGTTACATATGTCACATGTTTCAGAGTCCTATCATGGAATTTGGCG GATGTATAAACTTTCCTCATTAATTATGCAAATTAGATACTGATTTGCAT AAGAAGTGTCTAATCATGTACATCATCACTCAAGCTATCTACCTACCAAA AATCATTACCATCCATCAAGCCCTTCTTGAGTTATTCCCTTTCAAAGTCA GACGCAAAACCTGCTCCTGCAGTTCCAAAAAAGCCGCTAGGGGGCCCAAA CCCACACCACTTACTCTCTGTCCAAAGATCTATCTACCACTCAAAAATAA GTTCCATAGCATGTCCAGAACACGAGATATCAAAACAGGAAGTTCCGCTG CAGTACCGTAAGAAGCCGCTAGGGGGCCCAAAATCTCATCGTTTTTAGGT CTCATCAAAACCTACCAACATACCAAATATCAAGACAATCCATCAAGGCA TTCTCGAGTTATCCTGTGCCACTACAAACAGACANCGTTTTTAGGTCTCA TCAAAACCTACATGTACCAACATACCAAATACCAAGACAATCCATCAAGG CGTTCTTGAGTTATTCTGTGCCACTACAAACAGACAGACAAACAAACAAA CAAACGCTACCCTCTGCATAACCTTCTCGGCGAAGGTAATTAAGATCAAA GGTTGCTTGCATTATCCAATGGGACTGTAAATGTGAAAATAGTGACAAAA AGTACAGAATATAAATACTACAAATATGTTAAATATATGGCTAACAGTTT AACATTAACTTTAACCTCTATCTATCGATCTAAAACAATGAAGAACTTTT TATTCCAACCATGTTTATATGTAAAGCAAGTGGCAATGCTAGCTAAATGA ATTCTCAATACATTAGGGTGTTCTGCACTCCGTATTGGGACAGCAAAGTA CTTCATAAGCCTAATCCAAGTACACCATATTGCTGTCCTTGAAACACAGT CTGCATACATGTATATATATGCATGTGCTCCCTCTGCTATGATTGTTGAT GCTTATAGGTAAAGGGTGGTTAAGATTTCTAATCATCTCTCTGAAAGAGA AAGTTAATAGCACAAGCAAATTGTATTACTGATTGAGTAAATCCCCTGTT GTCACTTGATATATTGGTTTTACTTGCTTAAAGTTTAAGACCTTGACTTG ACATTTAGGGAAAGCTAGCTCCGAGTTACTCAGAGCATTTAGATTTGCCC ATATATATCAACCAGCAGTAATTGCTTGATGGGGCATAGAAACAACCACA TGTAATATATCAAGGAGCAAAATGGGGTGTTGCAATGAGTATTTATGGTC TTAATGGCCGGTCCTTCTTATGAACCCATTTAATGAGGCAGGGTAACTAT TGGCATTAGTGTGACCCATCTGGTTTGGATCCCTGCTTTGGCAAGCCATT CCGCTGGCTTGGCTCTCAAAATGTATACAAGTCTGGAACAGTTATATGTG ATACTATGTACGCTGTTAACTTTCTCTCTCCCGAGGTAGCCTTTTGACAC NTCTCCCGAGGTAGACTTTTGACACCAAAGTTGCATTTGTAATAGGATTA GACTGCAGGGAAAAGTTTGATGCTACAGGTAGCATTATAACAACAAAAAA CACTTGTCTAGATTTAAGAATACTTGTACATCATGATCAGGTATGTAATT ACATGTACTACATTGAGATTCTCACAAATTTAATAATTGTATTTCTTATT AATGTAATGATATCGTGTTACAACGAATTTTGTATCACTACAAATTGTTT TCCAATTCAATTTGTCTATTGTGCACATTATAGTATAGACGAATTGAATT GGAAAATACTTTCTCAGCTGCCACAGGCAATATGTGTAAACTATATGTTT TTATTACATTCTGATCTGATGATGTTTCACTTTCTCCCCCGTGCAGCTCT GATTCTCGACCTGTTCATCGTTGGAACTGTGAAAGCGATGGTCAGACGTA AGCGGCCACCGTACAATGAAGGGGACATGTTTGCGACCGTCTCCATCGAC AAGTTTTCCTTCCCGTCCGGCCACGCGACGCGATCGGCAATGGTGGTATC GTTTCTTATCGGCAATTGGTGGATGCCACTGGCTATAAAACACTTTCTCG TGCTCTGGGCATTCGCGATTGCCATGTCAAGGGTCATGTTAGGAAGACAC CACGTGAGCGACGTTGTCTCAGGGGTCGTTATTGGTCTAGTGCAGTACCG AATCGTCAGTTTCCTCTGGTTCTCGCCGTGGTTCTGCCAGATGCTTGTGT GGCCTTTTCTCGGGACGTTAAAGAGTCCAATCGCCGTGGGACTTTAACTT ATACCAAGTGGAAATCTATAAGTCTTAAATGAAGTTTGAGGACCCCCCTC CAGATACTTTGGTACAGGCTTGTTCTGTCACCAACAGTACAATAGGAGGA TCCAAGTTTGAGGGAATGGTTGGGAAAGAAACAAAGTTGTTGAAGTAAAG GAATGGTGAGCAGTCAATTTGCAGATGGTTGGTTAGAACACTTGTTTACA CTGATCATGTTAACAGCTCACAGTAAGCTGGATGGCAAGAATAGAAGAAA TTATCAATAGGAGAGAAGTGAGCACAATCATATTTAACAAAGAGGTTTAT GACTGGAACTAACTTGTTTATGAGTTGAAGATAAAGATGAGTTGAAGATA ACCAAAGACACACACTGAATGAGAAATCTCCTGTGTATAACGTAACATGA CCAATTAACGTCCGATTCATTCAAAACGTATTTATCTTAAAACCGCGCAA ACAGAGCCTAATTTCAAACCCATGGGCAGAAATATCAGCTCTTCAAAAAA GAAAATGCATGGTCTGTAAGTTTTTCTCCGCCTGTTTAACGCCGTGCGAG CATGCATTTATACTGAGGTATATGATGAAGAATTGTGCTAGGGTAACCCA TTATNN

Coding sequence (CDS) from alignment at Sc0000156:699156..710461+

>transcript:BL87387_cuf1 ID=transcript:BL87387_cuf1|Name=transcript:BL87387_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=4512bp|location=Sequence derived from alignment at Sc0000156:699156..710461+ (Branchiostoma lanceolatum)
ATGGCCCATCAGAGAAGTAAAAGGTCGCGAGGAGCGTTTTTCGAAGATGA
CGAGGAAGAGTTTGTTGCGAGTGGAAAGGGCGTGAACGAAAATCTCGTGA
ATGAAACTATTGACATGAGTAAGTTATGGAGGAACCCTGACGCAGTGTTT
CCCAAGCCTGGCCCTCCGCGTAGGCACAGTTTTGAAGAGGACACCACGTC
GCAGGGGGAGGGCGGGGATCGGTTTCGACGCCACAGCGGCCGGAGCGCCG
AAGTGAACGCGGCTGCAGAGGCGGCGGAGGCCAGGGCACAAGGCCGCGCC
CCCCCTCGGAGGACCAGCCGGGCATCAGAAGATGCAGAGGAGCAGGACAG
ACAAGCGGTCAGGGGAAGACCTGGTCTGGCCAGACAGTCCAGCCAGACGG
GACGGAAGGGGAGTCAGAATGATGCCAACCTGGGGAAACCCTGGGGACTG
CCCCGTACAGATAGGGGAAAGCCACAGCAGACCATGGGTCCGTCTGATCC
GAATGCCAGCCTGGGGGAGATAATATGGAGCTCACTGTTGGCTATTGACC
TCACCTTGTCCAAGACTATAAGTGTCTGTGCGAATCGCTCGGACAGTAAC
CTGCGCCACATCCTGATGTTCCTGGAGTTCTCGTGCCACGGGCTGCCCTG
GATCGTCGGCACGCTCTTCATGCTGTACAAAAGCACCTCCATCCTGCAGG
TGCAGAAACTCGTCAACCTCTTCGCAGCTCTGATTCTCGACCTGTTCATC
GTTGGAACTGTGAAAGCGATGGTCAGACGTAAGCGGCCACCGTACAATGA
AGGGGACATGTTTGCGACCGTCTCCATCGACAAGTTTTCCTTCCCGTCCG
GCCACGCGACGCGATCGGCAATGGTGGTATCGTTTCTTATCGGCAATTGG
TGGATGCCACTGGCTATAAAACACTTTCTCGTGCTCTGGGCATTCGCGAT
TGCCATGTCAAGGGTCATGTTAGGAAGACACCACGTGAGCGACGTTGTCT
CAGGGGTCGTTATTGGTCTAGTGCAGTACCGAATCGTCAGTTTCCTCTGG
TTCTCGCCGTGGTTCTGCCAGATGCTTGTGTGGCCTTTTCTCGGGACGTT
AAAGAGTCCAATCGCCGTGGGACTTTAAATGGCCCATCAGAGAAGTAAAA
GGTCGCGAGGAGCGTTTTTCGAAGATGACGAGGAAGAGTTTGTTGCGAGT
GGAAAGGGCGTGAACGAAAATCTCGTGAATGAAACTATTGACATGAGTAA
GTTATGGAGGAACCCTGACGCAGTGTTTCCCAAGCCTGGCCCTCCGCGTA
GGCACAGTTTTGAAGAGGACACCACGTCGCAGGGGGAGGGCGGGGATCGG
TTTCGACGCCACAGCGGCCGGAGCGCCGAAGTGAACGCGGCTGCAGAGGC
GGCGGAGGCCAGGGCACAAGGCCGCGCCCCCCCTCGGAGGACCAGCCGGG
CATCAGAAGATGCAGAGGAGCAGGACAGACAAGCGGTCAGGGGAAGACCT
GGTCTGGCCAGACAGTCCAGCCAGACGGGACGGAAGGGGAGTCAGAATGA
TGCCAACCTGGGGAAACCCTGGGGACTGCCCCGTACAGATAGGGGAAAGC
CACAGCAGACCATGGGTCCGTCTGATCCGAATGCCAGCCTGGGGGAGATA
ATATGGAGCTCACTGTTGGCTATTGACCTCACCTTGTCCAAGACTATAAG
TGTCTGTGCGAATCGCTCGGACAGTAACCTGCGCCACATCCTGATGTTCC
TGGAGTTCTCGTGCCACGGGCTGCCCTGGATCGTCGGCACGCTCTTCATG
CTGTACAAAAGCACCTCCATCCTGCAGGTGCAGAAACTCGTCAACCTCTT
CGCAGCTCTGATTCTCGACCTGTTCATCGTTGGAACTGTGAAAGCGATGG
TCAGACGTAAGCGGCCACCGTACAATGAAGGGGACATGTTTGCGACCGTC
TCCATCGACAAGTTTTCCTTCCCGTCCGGCCACGCGACGCGATCGGCAAT
GGTGGTATCGTTTCTTATCGGCAATTGGTGGATGCCACTGGCTATAAAAC
ACTTTCTCGTGCTCTGGGCATTCGCGATTGCCATGTCAAGGGTCATGTTA
GGAAGACACCACGTGAGCGACGTTGTCTCAGGGGTCGTTATTGGTCTAGT
GCAGTACCGAATCGTCAGTTTCCTCTGGTTCTCGCCGTGGTTCTGCCAGA
TGCTTGTGTGGCCTTTTCTCGGGACGTTAAAGAGTCCAATCGCCGTGGGA
CTTTAAATGGCCCATCAGAGAAGTAAAAGGTCGCGAGGAGCGTTTTTCGA
AGATGACGAGGAAGAGTTTGTTGCGAGTGGAAAGGGCGTGAACGAAAATC
TCGTGAATGAAACTATTGACATGAGTAAGTTATGGAGGAACCCTGACGCA
GTGTTTCCCAAGCCTGGCCCTCCGCGTAGGCACAGTTTTGAAGAGGACAC
CACGTCGCAGGGGGAGGGCGGGGATCGGTTTCGACGCCACAGCGGCCGGA
GCGCCGAAGTGAACGCGGCTGCAGAGGCGGCGGAGGCCAGGGCACAAGGC
CGCGCCCCCCCTCGGAGGACCAGCCGGGCATCAGAAGATGCAGAGGAGCA
GGACAGACAAGCGGTCAGGGGAAGACCTGGTCTGGCCAGACAGTCCAGCC
AGACGGGACGGAAGGGGAGTCAGAATGATGCCAACCTGGGGAAACCCTGG
GGACTGCCCCGTACAGATAGGGGAAAGCCACAGCAGACCATGGGTCCGTC
TGATCCGAATGCCAGCCTGGGGGAGATAATATGGAGCTCACTGTTGGCTA
TTGACCTCACCTTGTCCAAGACTATAAGTGTCTGTGCGAATCGCTCGGAC
AGTAACCTGCGCCACATCCTGATGTTCCTGGAGTTCTCGTGCCACGGGCT
GCCCTGGATCGTCGGCACGCTCTTCATGCTGTACAAAAGCACCTCCATCC
TGCAGGTGCAGAAACTCGTCAACCTCTTCGCAGCTCTGATTCTCGACCTG
TTCATCGTTGGAACTGTGAAAGCGATGGTCAGACGTAAGCGGCCACCGTA
CAATGAAGGGGACATGTTTGCGACCGTCTCCATCGACAAGTTTTCCTTCC
CGTCCGGCCACGCGACGCGATCGGCAATGGTGGTATCGTTTCTTATCGGC
AATTGGTGGATGCCACTGGCTATAAAACACTTTCTCGTGCTCTGGGCATT
CGCGATTGCCATGTCAAGGGTCATGTTAGGAAGACACCACGTGAGCGACG
TTGTCTCAGGGGTCGTTATTGGTCTAGTGCAGTACCGAATCGTCAGTTTC
CTCTGGTTCTCGCCGTGGTTCTGCCAGATGCTTGTGTGGCCTTTTCTCGG
GACGTTAAAGAGTCCAATCGCCGTGGGACTTTAAATGGCCCATCAGAGAA
GTAAAAGGTCGCGAGGAGCGTTTTTCGAAGATGACGAGGAAGAGTTTGTT
GCGAGTGGAAAGGGCGTGAACGAAAATCTCGTGAATGAAACTATTGACAT
GAGTAAGTTATGGAGGAACCCTGACGCAGTGTTTCCCAAGCCTGGCCCTC
CGCGTAGGCACAGTTTTGAAGAGGACACCACGTCGCAGGGGGAGGGCGGG
GATCGGTTTCGACGCCACAGCGGCCGGAGCGCCGAAGTGAACGCGGCTGC
AGAGGCGGCGGAGGCCAGGGCACAAGGCCGCGCCCCCCCTCGGAGGACCA
GCCGGGCATCAGAAGATGCAGAGGAGCAGGACAGACAAGCGGTCAGGGGA
AGACCTGGTCTGGCCAGACAGTCCAGCCAGACGGGACGGAAGGGGAGTCA
GAATGATGCCAACCTGGGGAAACCCTGGGGACTGCCCCGTACAGATAGGG
GAAAGCCACAGCAGACCATGGGTCCGTCTGATCCGAATGCCAGCCTGGGG
GAGATAATATGGAGCTCACTGTTGGCTATTGACCTCACCTTGTCCAAGAC
TATAAGTGTCTGTGCGAATCGCTCGGACAGTAACCTGCGCCACATCCTGA
TGTTCCTGGAGTTCTCGTGCCACGGGCTGCCCTGGATCGTCGGCACGCTC
TTCATGCTGTACAAAAGCACCTCCATCCTGCAGGTGCAGAAACTCGTCAA
CCTCTTCGCAGCTCTGATTCTCGACCTGTTCATCGTTGGAACTGTGAAAG
CGATGGTCAGACGTAAGCGGCCACCGTACAATGAAGGGGACATGTTTGCG
ACCGTCTCCATCGACAAGTTTTCCTTCCCGTCCGGCCACGCGACGCGATC
GGCAATGGTGGTATCGTTTCTTATCGGCAATTGGTGGATGCCACTGGCTA
TAAAACACTTTCTCGTGCTCTGGGCATTCGCGATTGCCATGTCAAGGGTC
ATGTTAGGAAGACACCACGTGAGCGACGTTGTCTCAGGGGTCGTTATTGG
TCTAGTGCAGTACCGAATCGTCAGTTTCCTCTGGTTCTCGCCGTGGTTCT
GCCAGATGCTTGTGTGGCCTTTTCTCGGGACGTTAAAGAGTCCAATCGCC
GTGGGACTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL87387gene:BL87387Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL87387_cuf1transcript:BL87387_cuf1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL87387_cuf1-E1BL87387_cuf1-E1-1564476830-353931Branchiostoma lanceolatumexon
BL87387_cuf1-E2BL87387_cuf1-E2-1564476830-353933Branchiostoma lanceolatumexon
BL87387_cuf1-E3BL87387_cuf1-E3-1564476830-353935Branchiostoma lanceolatumexon
BL87387_cuf1-E4BL87387_cuf1-E4-1564476830-353938Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000156genomeSc0000156:699156..710461 +
Properties
Property NameValue
Transcript idBL87387_cuf1
Biotypeprotein_coding