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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87341_cuf0 >transcript:BL87341_cuf0-protein ID=transcript:BL87341_cuf0-protein|Name=transcript:BL87341_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=444bp
KLSLYGKVTIINSLIIPQFTHLFQVLPMPDKQLFIDFERKVFSFIWSGGP
ERVSRKTMYNSIENGGLNLKNLYALALTIKASWVPKLYSNPSWFSAWLLR
VHPNVVEDLFPFFQIKSVQHLKIGSFLSEALLAWYKFQYKTPTTAREIRQ
QLLFMNTNICIEGVPFVFNAFVNRKIVFINDIVNSNGNILTYDEFSTKYG
TICNHFKYTQLISAIPSKWKSILCNNFPDQVCIPLIQNYTWLKQTKINKC
MYKFFLLSNNLMDTAHNVQLSWLYLFDSPIPWKVVYTLLTYCTIDPTLRF
FQYKILHKFLPTNRLLHIWKLTDDPLCSFCHLEEETYLHVFWECPNLIAF
WNKLKIWYLQKTGQEILLNGFNIIFGNLFPGTPVIQNFIILLAKYFIYHS
RKSKKVNFESFIVYLFFFNKVELYMATRKNKLEKHLGKWGRLCV Run BLAST on NCBI mRNA from alignment at Sc0000180:200522..202008+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87341_cuf0 ID=transcript:BL87341_cuf0|Name=transcript:BL87341_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1487bp|location=Sequence derived from alignment at Sc0000180:200522..202008+ (Branchiostoma lanceolatum)
AAATTATCACTATATGGTAAAGTAACAATCATTAATTCCCTTATTATTCC
ACAGTTTACCCACCTCTTTCAGGTCCTCCCTATGCCAGACAAGCAGTTAT
TTATAGATTTTGAGCGTAAAGTGTTCTCTTTTATCTGGAGCGGAGGACCA
GAAAGGGTTAGCAGGAAAACAATGTATAATTCAATAGAAAATGGTGGTCT
AAATCTTAAAAACCTATATGCATTGGCACTCACAATAAAAGCATCATGGG
TGCCTAAACTGTATTCTAATCCAAGCTGGTTTAGTGCTTGGCTTTTAAGA
GTGCATCCAAATGTGGTAGAAGATTTATTTCCCTTTTTTCAGATCAAATC
TGTACAGCACCTCAAAATAGGTTCCTTTTTAAGTGAAGCCTTATTGGCTT
GGTATAAGTTTCAATATAAGACCCCCACAACCGCTAGAGAAATTAGACAA
CAATTATTATTCATGAATACAAATATATGTATTGAAGGTGTACCTTTTGT
ATTTAATGCTTTTGTCAATAGAAAAATTGTTTTTATAAATGATATTGTGA
ATTCAAATGGTAACATCTTGACTTATGATGAATTTTCCACGAAATATGGA
ACAATTTGTAACCATTTTAAATACACACAGTTGATTTCTGCCATTCCAAG
CAAATGGAAATCAATTTTGTGTAATAATTTCCCAGATCAAGTATGTATAC
CTTTAATTCAGAACTATACATGGTTAAAACAGACAAAAATCAATAAATGT
ATGTATAAATTCTTTTTACTTTCCAATAACCTTATGGATACTGCACATAA
TGTACAATTATCTTGGCTGTACCTCTTTGACTCCCCCATCCCATGGAAAG
TAGTATACACTTTGTTGACTTACTGCACTATAGACCCAACACTTAGGTTT
TTTCAGTACAAAATCTTACATAAGTTTTTACCTACAAACAGATTATTGCA
TATTTGGAAATTGACTGATGACCCGTTGTGCTCATTTTGTCATCTTGAAG
AGGAGACTTACCTTCATGTGTTTTGGGAATGTCCTAACTTAATAGCTTTT
TGGAATAAACTCAAAATTTGGTACCTTCAAAAAACAGGTCAAGAAATTCT
TTTAAATGGTTTTAATATCATTTTCGGAAACCTTTTCCCAGGCACCCCTG
TAATCCAAAACTTTATTATCTTATTAGCTAAATATTTTATATACCATAGT
AGAAAGTCCAAAAAAGTGAATTTTGAATCCTTTATTGTTTATTTATTCTT
CTTCAATAAAGTTGAATTATATATGGCTACAAGGAAAAATAAATTGGAAA
AACATCTGGGTAAATGGGGCAGATTATGTGTGTGAAGTACACTACATTTT
GCCATACCTTCTGTGTTATTTACACATATCATTCTGTCAGTTTTTACTAT
TTTTTGTTGCATATCTATCATAAATCACATTATTTATGTACATTTATGTT
ATTTTGGTTTGATAATATTTAAGTTGGATGGTCCACC Coding sequence (CDS) from alignment at Sc0000180:200522..202008+ >transcript:BL87341_cuf0 ID=transcript:BL87341_cuf0|Name=transcript:BL87341_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1335bp|location=Sequence derived from alignment at Sc0000180:200522..202008+ (Branchiostoma lanceolatum)
AAATTATCACTATATGGTAAAGTAACAATCATTAATTCCCTTATTATTCC
ACAGTTTACCCACCTCTTTCAGGTCCTCCCTATGCCAGACAAGCAGTTAT
TTATAGATTTTGAGCGTAAAGTGTTCTCTTTTATCTGGAGCGGAGGACCA
GAAAGGGTTAGCAGGAAAACAATGTATAATTCAATAGAAAATGGTGGTCT
AAATCTTAAAAACCTATATGCATTGGCACTCACAATAAAAGCATCATGGG
TGCCTAAACTGTATTCTAATCCAAGCTGGTTTAGTGCTTGGCTTTTAAGA
GTGCATCCAAATGTGGTAGAAGATTTATTTCCCTTTTTTCAGATCAAATC
TGTACAGCACCTCAAAATAGGTTCCTTTTTAAGTGAAGCCTTATTGGCTT
GGTATAAGTTTCAATATAAGACCCCCACAACCGCTAGAGAAATTAGACAA
CAATTATTATTCATGAATACAAATATATGTATTGAAGGTGTACCTTTTGT
ATTTAATGCTTTTGTCAATAGAAAAATTGTTTTTATAAATGATATTGTGA
ATTCAAATGGTAACATCTTGACTTATGATGAATTTTCCACGAAATATGGA
ACAATTTGTAACCATTTTAAATACACACAGTTGATTTCTGCCATTCCAAG
CAAATGGAAATCAATTTTGTGTAATAATTTCCCAGATCAAGTATGTATAC
CTTTAATTCAGAACTATACATGGTTAAAACAGACAAAAATCAATAAATGT
ATGTATAAATTCTTTTTACTTTCCAATAACCTTATGGATACTGCACATAA
TGTACAATTATCTTGGCTGTACCTCTTTGACTCCCCCATCCCATGGAAAG
TAGTATACACTTTGTTGACTTACTGCACTATAGACCCAACACTTAGGTTT
TTTCAGTACAAAATCTTACATAAGTTTTTACCTACAAACAGATTATTGCA
TATTTGGAAATTGACTGATGACCCGTTGTGCTCATTTTGTCATCTTGAAG
AGGAGACTTACCTTCATGTGTTTTGGGAATGTCCTAACTTAATAGCTTTT
TGGAATAAACTCAAAATTTGGTACCTTCAAAAAACAGGTCAAGAAATTCT
TTTAAATGGTTTTAATATCATTTTCGGAAACCTTTTCCCAGGCACCCCTG
TAATCCAAAACTTTATTATCTTATTAGCTAAATATTTTATATACCATAGT
AGAAAGTCCAAAAAAGTGAATTTTGAATCCTTTATTGTTTATTTATTCTT
CTTCAATAAAGTTGAATTATATATGGCTACAAGGAAAAATAAATTGGAAA
AACATCTGGGTAAATGGGGCAGATTATGTGTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000180 | genome | Sc0000180:200522..202008 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87341_cuf0 |
| Biotype | protein_coding |
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