|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87075_cuf0 >transcript:BL87075_cuf0-protein ID=transcript:BL87075_cuf0-protein|Name=transcript:BL87075_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=138bp
MAFSFLRSWRLVFFLLCCFSILDFRAVALLFVGWIRSTLARAACSLVSVL
AIVPSNSFSFAKYSVLNEYIVPRPCLSWLVPDLNRVLLCSSSLVVISDTT
FWASPSFSLFNLMVFPSLSDLIRKVSDRNLPPPAEFIL Run BLAST on NCBI mRNA from alignment at xfSc0008927:1..1161+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87075_cuf0 ID=transcript:BL87075_cuf0|Name=transcript:BL87075_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1161bp|location=Sequence derived from alignment at xfSc0008927:1..1161+ (Branchiostoma lanceolatum)
ATGAAGATGAAGTTCTGTTAGAGTTAGGAACAAATGACAGTGACAGTGAT
ACCAATGTAGATGAGGGACATGAGATGGTGGGGGCAGGAACAGTTGAAGA
TGTGACTATATCACGGTTTGGAAGGAGGAGGCAGAAGAAAGCTGTAAACC
CAGATTACATTCTATGGTGACAGGGCAGCAGAAAGTTGTAAATACTGAAT
TTACTGATCACAATATGTTGCCTATGATGATTTGTATGGTATGAAATAGT
ATATCTAGTGTGGCATAACATACCTTCCATGTCAGCCTGCCTGGCACTCT
TTCTCCACATCCTCTCCAAGTTGTCACGGCAGCTTTTGGTCAGGTTACTC
CTAGTTTTCTTCTTTGCGGCTGCTGTCAAGAGGTCCGTCTCTAGAAGATA
GTGCAGGGAAGGAATCCTCTTGTATGAAAGGTTCTTCACAGCTTCTTCGC
TGACTTCCTCTGCTTGGACTGGACTGCTGCCATTGGGTGCGATTGCCTGC
AGGATTTCTTGGATGGCTTTTTCCTTCCTGCGCTCCTGGCGCTTGGTTTT
CTTCCTCCTCTGTTGCTTTTCCATCCTCGATTTTCGTGCAGTTGCCCTCC
TTTTTGTGGGATGGATCCGCTCCACTTTAGCAAGGGCAGCCTGTAGCCTT
GTATCAGTGCTGGCTATTGTTCCATCCAACTCTTTTAGCTTTGCCAAGTA
CTCTGTGTTAAATGAGTACATTGTTCCCCGGCCTTGCCTGAGCTGGCTTG
TACCTGACTTGAACAGGGTGTTGTTGTGCTCTTCCAGCTTGGTTGTCATC
TCAGACACCACCTTCTGGGCCTCGCCCAGCTTCTCCCTGTTCAACTTGAT
GGTATTTCCGTCGCTTTCTGACTTGATCCGGAAAGTGTCAGACAGGAATC
TCCCACCTCCTGCAGAGTTCATACTTTGAACAAAGTTCACCGTCTTCAAG
CACTTGTCCGTCTTCTCCCTAATTCCAAACTGCCTGTTTCTCTCTACCAG
GAACTCTCTCTTGAAAATTTTCTGATCCTGGCAAGTGACCCAGTATGTGG
AGTAAAACTCCGGCAACAAGGCGTTTGTAAACCTTGTCTTTGCTTCCTTC
GGATACGACACCCAGCCAAGGCGTTCCTTCCTCTCCTCTGACATCTAAAG
AAATACAGGTT Coding sequence (CDS) from alignment at xfSc0008927:1..1161+ >transcript:BL87075_cuf0 ID=transcript:BL87075_cuf0|Name=transcript:BL87075_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=417bp|location=Sequence derived from alignment at xfSc0008927:1..1161+ (Branchiostoma lanceolatum)
ATGGCTTTTTCCTTCCTGCGCTCCTGGCGCTTGGTTTTCTTCCTCCTCTG
TTGCTTTTCCATCCTCGATTTTCGTGCAGTTGCCCTCCTTTTTGTGGGAT
GGATCCGCTCCACTTTAGCAAGGGCAGCCTGTAGCCTTGTATCAGTGCTG
GCTATTGTTCCATCCAACTCTTTTAGCTTTGCCAAGTACTCTGTGTTAAA
TGAGTACATTGTTCCCCGGCCTTGCCTGAGCTGGCTTGTACCTGACTTGA
ACAGGGTGTTGTTGTGCTCTTCCAGCTTGGTTGTCATCTCAGACACCACC
TTCTGGGCCTCGCCCAGCTTCTCCCTGTTCAACTTGATGGTATTTCCGTC
GCTTTCTGACTTGATCCGGAAAGTGTCAGACAGGAATCTCCCACCTCCTG
CAGAGTTCATACTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0008927 | genome | xfSc0008927:1..1161 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87075_cuf0 |
| Biotype | protein_coding |
|
