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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL87003_cuf0 >transcript:BL87003_cuf0-protein ID=transcript:BL87003_cuf0-protein|Name=transcript:BL87003_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=443bp
YFHLYRTKSKRAKRSSGGILFFYKNEYKNYVKKIPSKSSDVLWVQIDRSL
FGLQKDLFLCSVYISPNNSTIHKNADNHVLDILEEEISRYGTEGFILLGG
DLNSRLGNLPDYVDNSNNDGFPDTSSNHVSDRQRLDISPPNKFGRLLSDL
CIQSDLRILNGRVAGDLQGNFTCHQPNGSSTVDYIISSKSFLQNILLFRV
HPLSVFSDHCMLSVYIHSNSAHQNHFEKKKRSKTKSSPKLFHWNDKSTQK
FIQTLSQSQFNTRLNSLSSQNTNDITSKEEIEKIASDFSSILRDAGFKSL
SIRRTNYKKHTQRKQTKQWFDKTCVELKREVKNLSSLLVKQPSNPVIRGS
YFRRKKEYKKLIKKKKREFHNLIMTQLASLKDRNPGAFWNIMNKLKPKKA
QDNHQITEEEWFKHFSNLEKLPNNDINDCPTSTIDQLDVSSFP Run BLAST on NCBI mRNA from alignment at Sc0000004:7216872..7218203- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL87003_cuf0 ID=transcript:BL87003_cuf0|Name=transcript:BL87003_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1332bp|location=Sequence derived from alignment at Sc0000004:7216872..7218203- (Branchiostoma lanceolatum)
GCTATTTCCATTTGTATAGAACAAAAAGTAAACGGGCAAAACGCTCCTCA
GGGGGAATATTATTTTTCTACAAAAACGAGTACAAAAATTATGTAAAGAA
AATACCTTCAAAATCATCGGATGTCCTCTGGGTACAAATTGATCGCAGCT
TGTTTGGACTCCAGAAGGACTTATTCCTATGTTCCGTTTATATAAGCCCA
AATAATTCAACTATTCATAAGAATGCCGATAATCACGTGTTAGATATATT
AGAGGAAGAAATTAGCAGGTACGGCACAGAGGGATTTATTCTTCTTGGGG
GAGACCTTAATTCGCGCCTCGGCAATCTTCCTGATTATGTAGATAATAGT
AACAACGACGGTTTCCCCGATACCTCCTCAAACCACGTCAGCGATAGACA
ACGCTTGGACATATCACCTCCCAACAAATTTGGCCGACTTCTATCTGATC
TGTGCATTCAATCAGATCTTAGAATCCTAAATGGCAGGGTAGCGGGCGAT
TTGCAAGGCAACTTTACCTGTCACCAGCCTAACGGTAGCAGTACGGTCGA
TTACATAATCTCCAGCAAATCCTTTCTTCAAAACATCTTATTATTTCGAG
TTCATCCTTTATCTGTTTTTTCCGACCACTGTATGTTATCAGTATACATA
CATTCCAATTCTGCACATCAAAATCACTTCGAAAAAAAGAAAAGATCTAA
AACTAAATCTTCCCCCAAACTCTTTCACTGGAATGATAAATCCACACAAA
AATTCATTCAGACCCTTTCACAATCTCAATTTAACACCAGATTGAACTCC
CTCTCATCCCAAAACACCAACGATATAACCTCGAAGGAGGAAATAGAAAA
AATCGCATCGGACTTTAGTTCAATCTTGAGGGACGCGGGTTTCAAATCAT
TATCAATTAGGAGAACTAATTACAAAAAACATACCCAGCGTAAGCAAACA
AAACAATGGTTTGATAAAACCTGTGTGGAACTAAAACGGGAGGTGAAGAA
CTTATCATCATTACTAGTAAAACAACCGTCCAATCCTGTCATAAGGGGAA
GTTACTTTAGAAGAAAGAAAGAATATAAAAAACTTATAAAAAAGAAGAAA
AGGGAATTTCATAATCTTATCATGACCCAATTAGCCTCCCTTAAGGACAG
AAATCCAGGTGCTTTTTGGAATATTATGAACAAACTAAAACCAAAAAAAG
CACAAGATAATCATCAAATCACAGAAGAAGAATGGTTTAAACACTTCAGT
AACCTAGAAAAACTTCCCAACAATGATATAAACGACTGTCCCACTTCTAC
AATCGACCAACTAGATGTATCGTCATTCCCTA Coding sequence (CDS) from alignment at Sc0000004:7216872..7218203- >transcript:BL87003_cuf0 ID=transcript:BL87003_cuf0|Name=transcript:BL87003_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1329bp|location=Sequence derived from alignment at Sc0000004:7216872..7218203- (Branchiostoma lanceolatum)
TATTTCCATTTGTATAGAACAAAAAGTAAACGGGCAAAACGCTCCTCAGG
GGGAATATTATTTTTCTACAAAAACGAGTACAAAAATTATGTAAAGAAAA
TACCTTCAAAATCATCGGATGTCCTCTGGGTACAAATTGATCGCAGCTTG
TTTGGACTCCAGAAGGACTTATTCCTATGTTCCGTTTATATAAGCCCAAA
TAATTCAACTATTCATAAGAATGCCGATAATCACGTGTTAGATATATTAG
AGGAAGAAATTAGCAGGTACGGCACAGAGGGATTTATTCTTCTTGGGGGA
GACCTTAATTCGCGCCTCGGCAATCTTCCTGATTATGTAGATAATAGTAA
CAACGACGGTTTCCCCGATACCTCCTCAAACCACGTCAGCGATAGACAAC
GCTTGGACATATCACCTCCCAACAAATTTGGCCGACTTCTATCTGATCTG
TGCATTCAATCAGATCTTAGAATCCTAAATGGCAGGGTAGCGGGCGATTT
GCAAGGCAACTTTACCTGTCACCAGCCTAACGGTAGCAGTACGGTCGATT
ACATAATCTCCAGCAAATCCTTTCTTCAAAACATCTTATTATTTCGAGTT
CATCCTTTATCTGTTTTTTCCGACCACTGTATGTTATCAGTATACATACA
TTCCAATTCTGCACATCAAAATCACTTCGAAAAAAAGAAAAGATCTAAAA
CTAAATCTTCCCCCAAACTCTTTCACTGGAATGATAAATCCACACAAAAA
TTCATTCAGACCCTTTCACAATCTCAATTTAACACCAGATTGAACTCCCT
CTCATCCCAAAACACCAACGATATAACCTCGAAGGAGGAAATAGAAAAAA
TCGCATCGGACTTTAGTTCAATCTTGAGGGACGCGGGTTTCAAATCATTA
TCAATTAGGAGAACTAATTACAAAAAACATACCCAGCGTAAGCAAACAAA
ACAATGGTTTGATAAAACCTGTGTGGAACTAAAACGGGAGGTGAAGAACT
TATCATCATTACTAGTAAAACAACCGTCCAATCCTGTCATAAGGGGAAGT
TACTTTAGAAGAAAGAAAGAATATAAAAAACTTATAAAAAAGAAGAAAAG
GGAATTTCATAATCTTATCATGACCCAATTAGCCTCCCTTAAGGACAGAA
ATCCAGGTGCTTTTTGGAATATTATGAACAAACTAAAACCAAAAAAAGCA
CAAGATAATCATCAAATCACAGAAGAAGAATGGTTTAAACACTTCAGTAA
CCTAGAAAAACTTCCCAACAATGATATAAACGACTGTCCCACTTCTACAA
TCGACCAACTAGATGTATCGTCATTCCCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:7216872..7218203 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL87003_cuf0 |
| Biotype | protein_coding |
|
