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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86999_cuf0 >transcript:BL86999_cuf0-protein ID=transcript:BL86999_cuf0-protein|Name=transcript:BL86999_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=209bp
PPRRKGPDTLVILAAIFYCLAALTAVVFAVLFKTNVLSVYTPPEPVPAWV
QQFSPEMQRWYRLALAGGRDASAIQPPGTVQQPTEEPPVEEFCGNKSLPA
LRHGHFNCSNIAYYNIHVRMCSAKCHVGYQTDDAGLLFCNRGRWAPIRPE
VLSTLVGVGRAADTMPNTDPRVFEYLGITDEIYADMALNILVKVEEVPNL
SIVKIYLNM Run BLAST on NCBI mRNA from alignment at Sc0000004:7132331..7133677- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86999_cuf0 ID=transcript:BL86999_cuf0|Name=transcript:BL86999_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1347bp|location=Sequence derived from alignment at Sc0000004:7132331..7133677- (Branchiostoma lanceolatum)
CCCGCCGCGCAGGAAAGGGCCGGACACGCTGGTCATCCTCGCCGCCATCT
TCTACTGCCTGGCCGCCCTGACAGCTGTGGTCTTCGCTGTCCTGTTCAAG
ACCAACGTCCTGTCAGGTGAGTACAGAGTAGCTAACGCTTCTGTCATCTC
CAACTGCCTTACAGCTGTAGCAGTTCCCACAGAAGGTCTTACATGCATTG
TTCTAAAGCAAAGTCGTGTCAGGTGAGTTGCCTTTGCGGCCACCTAGTTC
GTTTTTTTTTTCTTCAGGTTGAATATTACCACTTTTGTCATGAACACATT
GAGAATGCTGAAGTCTTCGATTTGACTGCAGTCAGCGGCCGGGTCTTAGT
TTATTTCTGATTGCTTTTCCAGAATGTATTTGTCTGAATAATCATTCTGT
TTCAGGTTTCATTGAATTGACCTTCGTCATCTTCTGTTTTATGTCAATTT
TGTAACATCGAACATCGTTACATATTTTCGATCTTTTTTTGACAGTGTAC
ACGCCCCCCGAGCCCGTGCCTGCGTGGGTTCAGCAGTTTTCCCCGGAGAT
GCAGAGGTGGTACCGGCTGGCGCTGGCCGGAGGGCGGGACGCATCGGCGA
TACAGCCGCCGGGAACCGTGCAGCAGCCGACCGAGGAGCCTCCTGTGGAA
GAGTGTAAGTCACCTTGTGAGCTTGAGTGCTACTGTCTGTATAGCAAAAA
GAAAACAGCAACATGGGGCTATGATGACTGATTGTCCTTTATCTGTATAA
TTTGTTACATGTATATATCAATATTACATGTTATGAAATATGTCATCCAA
GGTCTCAGGGTAAAACATTGTCTTTCGCTGAGTTGGACCGCCCTTGGTTT
ATCTGTGCATGACTACACCTGTACGCACACGTCATCTTATTAGTAATGTT
TGTTAACAAGATCGGTCCTCTTCAAAAGTTAAGACCAGCATAGAAAAATA
GTTGCTGTTGACTTTGATTTTAGAATATTGACTTCTTTTCAGTTTGCGGA
AACAAGTCACTCCCTGCCTTACGTCACGGCCACTTCAACTGCTCCAACAT
CGCCTACTACAACATCCACGTGCGCATGTGTAGCGCCAAGTGTCACGTGG
GCTACCAGACCGATGACGCAGGCCTGCTGTTCTGCAACCGCGGCCGATGG
GCGCCGATCAGACCCGAAGTCTTGTCGACTCTCGTCGGCGTCGGTCGGGC
TGCCGACACGATGCCGAACACCGACCCTCGGGTGTTCGAGTATCTCGGCA
TCACCGACGAAATTTACGCAGACATGGCGCTCAACATTTTAGTAAAGGTT
GAGGAAGTCCCGAACCTTTCTATCGTGAAGATATATCTGAATATGAT Coding sequence (CDS) from alignment at Sc0000004:7132331..7133677- >transcript:BL86999_cuf0 ID=transcript:BL86999_cuf0|Name=transcript:BL86999_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1881bp|location=Sequence derived from alignment at Sc0000004:7132331..7133677- (Branchiostoma lanceolatum)
CCGCCGCGCAGGAAAGGGCCGGACACGCTGGTCATCCTCGCCGCCATCTT
CTACTGCCTGGCCGCCCTGACAGCTGTGGTCTTCGCTGTCCTGTTCAAGA
CCAACGTCCTGTCAGTGTACACGCCCCCCGAGCCCGTGCCTGCGTGGGTT
CAGCAGTTTTCCCCGGAGATGCAGAGGTGGTACCGGCTGGCGCTGGCCGG
AGGGCGGGACGCATCGGCGATACAGCCGCCGGGAACCGTGCAGCAGCCGA
CCGAGGAGCCTCCTGTGGAAGAGTTTTGCGGAAACAAGTCACTCCCTGCC
TTACGTCACGGCCACTTCAACTGCTCCAACATCGCCTACTACAACATCCA
CGTGCGCATGTGTAGCGCCAAGTGTCACGTGGGCTACCAGACCGATGACG
CAGGCCTGCTGTTCTGCAACCGCGGCCGATGGGCGCCGATCAGACCCGAA
GTCTTGTCGACTCTCGTCGGCGTCGGTCGGGCTGCCGACACGATGCCGAA
CACCGACCCTCGGGTGTTCGAGTATCTCGGCATCACCGACGAAATTTACG
CAGACATGGCGCTCAACATTTTAGTAAAGGTTGAGGAAGTCCCGAACCTT
TCTATCGTGAAGATATATCTGAATATGCCGCCGCGCAGGAAAGGGCCGGA
CACGCTGGTCATCCTCGCCGCCATCTTCTACTGCCTGGCCGCCCTGACAG
CTGTGGTCTTCGCTGTCCTGTTCAAGACCAACGTCCTGTCAGTGTACACG
CCCCCCGAGCCCGTGCCTGCGTGGGTTCAGCAGTTTTCCCCGGAGATGCA
GAGGTGGTACCGGCTGGCGCTGGCCGGAGGGCGGGACGCATCGGCGATAC
AGCCGCCGGGAACCGTGCAGCAGCCGACCGAGGAGCCTCCTGTGGAAGAG
TTTTGCGGAAACAAGTCACTCCCTGCCTTACGTCACGGCCACTTCAACTG
CTCCAACATCGCCTACTACAACATCCACGTGCGCATGTGTAGCGCCAAGT
GTCACGTGGGCTACCAGACCGATGACGCAGGCCTGCTGTTCTGCAACCGC
GGCCGATGGGCGCCGATCAGACCCGAAGTCTTGTCGACTCTCGTCGGCGT
CGGTCGGGCTGCCGACACGATGCCGAACACCGACCCTCGGGTGTTCGAGT
ATCTCGGCATCACCGACGAAATTTACGCAGACATGGCGCTCAACATTTTA
GTAAAGGTTGAGGAAGTCCCGAACCTTTCTATCGTGAAGATATATCTGAA
TATGCCGCCGCGCAGGAAAGGGCCGGACACGCTGGTCATCCTCGCCGCCA
TCTTCTACTGCCTGGCCGCCCTGACAGCTGTGGTCTTCGCTGTCCTGTTC
AAGACCAACGTCCTGTCAGTGTACACGCCCCCCGAGCCCGTGCCTGCGTG
GGTTCAGCAGTTTTCCCCGGAGATGCAGAGGTGGTACCGGCTGGCGCTGG
CCGGAGGGCGGGACGCATCGGCGATACAGCCGCCGGGAACCGTGCAGCAG
CCGACCGAGGAGCCTCCTGTGGAAGAGTTTTGCGGAAACAAGTCACTCCC
TGCCTTACGTCACGGCCACTTCAACTGCTCCAACATCGCCTACTACAACA
TCCACGTGCGCATGTGTAGCGCCAAGTGTCACGTGGGCTACCAGACCGAT
GACGCAGGCCTGCTGTTCTGCAACCGCGGCCGATGGGCGCCGATCAGACC
CGAAGTCTTGTCGACTCTCGTCGGCGTCGGTCGGGCTGCCGACACGATGC
CGAACACCGACCCTCGGGTGTTCGAGTATCTCGGCATCACCGACGAAATT
TACGCAGACATGGCGCTCAACATTTTAGTAAAGGTTGAGGAAGTCCCGAA
CCTTTCTATCGTGAAGATATATCTGAATATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:7132331..7133677 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86999_cuf0 |
| Biotype | protein_coding |
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