|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86964_cuf0 >transcript:BL86964_cuf0-protein ID=transcript:BL86964_cuf0-protein|Name=transcript:BL86964_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=301bp
FTPGTTILADAAGRALGGILGKVKVLKDLGYEAYSTLYSSCVCPILDYAA
GVWGFKKYDKSTVIQNRAIRCFLGVHRFAPTHAINGDMGWTPCEVRWKGA
MVAMWNRLVNMSDDRITKKVFRWDLRNNGPWSKDLYEIFSESGQEHVFQN
RLRGDTRLTKDVLFSQYEQKWAYELWLKPKLRTYALIKDSFSLSRSLCAQ
LRAGILPLSIETGRFNAIPEDDRICLLCNLHEIENEVHFLFYCPFYDSLR
QTLFNKMYNKRPDIIWERDETKLNWLFTEGVFEIASYIQKAWRERKHYIY
S Run BLAST on NCBI mRNA from alignment at Sc0000042:1719639..1720895- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86964_cuf0 ID=transcript:BL86964_cuf0|Name=transcript:BL86964_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1257bp|location=Sequence derived from alignment at Sc0000042:1719639..1720895- (Branchiostoma lanceolatum)
CTTTTACCCCTGGTACCACTATTCTTGCAGATGCTGCGGGTAGGGCCTTG
GGAGGTATACTTGGCAAAGTTAAAGTCCTAAAAGACTTAGGATATGAAGC
CTACTCTACACTGTACAGTTCATGTGTCTGTCCTATACTGGATTACGCTG
CGGGTGTGTGGGGTTTTAAAAAGTATGACAAAAGCACTGTTATTCAGAAT
AGAGCCATTCGGTGCTTCCTTGGCGTTCACCGCTTTGCTCCCACTCATGC
CATAAATGGTGACATGGGCTGGACACCGTGTGAAGTTAGATGGAAAGGGG
CTATGGTGGCTATGTGGAACAGGCTAGTGAATATGTCTGACGACAGGATT
ACAAAGAAGGTTTTTAGATGGGACCTGCGAAATAATGGTCCCTGGAGTAA
AGACTTGTATGAAATATTCTCTGAATCAGGACAAGAACATGTTTTTCAAA
ATAGGTTAAGAGGCGACACGAGACTCACAAAAGATGTACTATTCTCGCAA
TATGAACAAAAGTGGGCTTATGAGCTCTGGCTTAAGCCAAAACTAAGAAC
GTATGCACTGATAAAAGACTCATTCTCTCTCTCAAGATCTCTGTGTGCCC
AGCTGAGAGCGGGCATATTACCTTTGTCTATTGAAACAGGAAGATTTAAT
GCCATTCCTGAGGATGATAGAATTTGTCTACTGTGTAATCTACATGAAAT
TGAAAATGAGGTCCATTTCCTATTTTATTGCCCTTTTTACGACAGTTTAC
GCCAAACACTGTTCAACAAAATGTACAACAAGAGACCTGATATCATTTGG
GAAAGAGATGAAACAAAACTTAACTGGTTATTCACGGAGGGGGTATTTGA
AATTGCTTCATACATTCAAAAGGCTTGGAGGGAACGTAAGCACTACATCT
ACTCATAACAAGACAACAACAACAACAACAAAAAAAAAAAAAACTTCAAT
GGAATGATTTGATCCTATTTTGCATCTAGTTTTGGCTTTGTCTGGTTTTG
TCTCTACCCTGTCATATACTGTTTTGACTGTTATATACTGAGTTGATATA
CGTGTGTTACCTTCAACAACTTTTAACTTGAATTTAATTTATGTTCATTT
ACGACTTGCTTTCTTGAATTGAATCATTGTACCAGGTGTGTCCCTTTTTG
TGTTTCCACTTTATTATGCTCATATTATTTTGTTACTCAGTACTGCTATT
ATTATGATTTATTTCTGATTATCATTATTTACTACTGTACCTCCTACATT
TCTCAAG Coding sequence (CDS) from alignment at Sc0000042:1719639..1720895- >transcript:BL86964_cuf0 ID=transcript:BL86964_cuf0|Name=transcript:BL86964_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=906bp|location=Sequence derived from alignment at Sc0000042:1719639..1720895- (Branchiostoma lanceolatum)
TTTACCCCTGGTACCACTATTCTTGCAGATGCTGCGGGTAGGGCCTTGGG
AGGTATACTTGGCAAAGTTAAAGTCCTAAAAGACTTAGGATATGAAGCCT
ACTCTACACTGTACAGTTCATGTGTCTGTCCTATACTGGATTACGCTGCG
GGTGTGTGGGGTTTTAAAAAGTATGACAAAAGCACTGTTATTCAGAATAG
AGCCATTCGGTGCTTCCTTGGCGTTCACCGCTTTGCTCCCACTCATGCCA
TAAATGGTGACATGGGCTGGACACCGTGTGAAGTTAGATGGAAAGGGGCT
ATGGTGGCTATGTGGAACAGGCTAGTGAATATGTCTGACGACAGGATTAC
AAAGAAGGTTTTTAGATGGGACCTGCGAAATAATGGTCCCTGGAGTAAAG
ACTTGTATGAAATATTCTCTGAATCAGGACAAGAACATGTTTTTCAAAAT
AGGTTAAGAGGCGACACGAGACTCACAAAAGATGTACTATTCTCGCAATA
TGAACAAAAGTGGGCTTATGAGCTCTGGCTTAAGCCAAAACTAAGAACGT
ATGCACTGATAAAAGACTCATTCTCTCTCTCAAGATCTCTGTGTGCCCAG
CTGAGAGCGGGCATATTACCTTTGTCTATTGAAACAGGAAGATTTAATGC
CATTCCTGAGGATGATAGAATTTGTCTACTGTGTAATCTACATGAAATTG
AAAATGAGGTCCATTTCCTATTTTATTGCCCTTTTTACGACAGTTTACGC
CAAACACTGTTCAACAAAATGTACAACAAGAGACCTGATATCATTTGGGA
AAGAGATGAAACAAAACTTAACTGGTTATTCACGGAGGGGGTATTTGAAA
TTGCTTCATACATTCAAAAGGCTTGGAGGGAACGTAAGCACTACATCTAC
TCATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1719639..1720895 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86964_cuf0 |
| Biotype | protein_coding |
|
