transcript:BL86947_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL86947_cuf0
Unique Nametranscript:BL86947_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL86947_cuf0

>transcript:BL86947_cuf0-protein ID=transcript:BL86947_cuf0-protein|Name=transcript:BL86947_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=99bp
MVCPFCPEVVEDEHHFLIVCPKYFDVRNSLYSVLSSDLPGFISMDLNSKF
KYIMKCDNPCMVCIGKYIKECLDVRNSCNDCKIPLSSHATTPYFIRQTN
Run BLAST on NCBI

mRNA from alignment at Sc0000063:1396564..1397377-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL86947_cuf0 ID=transcript:BL86947_cuf0|Name=transcript:BL86947_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=814bp|location=Sequence derived from alignment at Sc0000063:1396564..1397377- (Branchiostoma lanceolatum)
GACAAAATGCATCGACCTTTATTGATGATGGCTTCGTGTTTTGTCTCAAC
AAAACGGCGAGGTCGAGTGAAGTGGTATTTGTACATTTTTGGTAGGGCAT
GTTTGTTTCTGTTTTTACTGTCAACAAACTCATCGGATCCAATCTCTGTT
AAAAGATGAATTTCCCGCGGTGCCTCCTAATGTCACAAAGTTCAAACTAC
CTACCTCGTGCTCGATATACTTGCAAATGCGCATGCACAGCCTTTGAGCA
TCTGTACAGAAGAAAACGTGAGGTCATCGTGATAACAACATCGCAATGAA
GGAGCGTTAAAACTATTCCTCCTTTGACTTCTCGTGAACCTCTCCTGGGC
TCTTCATGCATATAGTGAGCTTTACTGAAGTTTGAGACTAGTTGAAACCA
CGAGACACGCGGCGTTTATTTCGCGTGTTGATTTGTTAATTCCAGCTCGC
GTGGTGATTTGTTAATTCGTGCGGCCAAGATAATCAATAAATATGGTTTG
TCCATTTTGTCCAGAGGTAGTTGAAGACGAACATCACTTTTTGATTGTAT
GTCCCAAATATTTTGATGTACGTAATTCACTATACTCAGTGCTATCGTCG
GATCTACCAGGATTTATCTCAATGGACTTGAATAGCAAATTTAAGTACAT
AATGAAATGTGACAACCCATGCATGGTATGCATTGGGAAGTATATCAAAG
AATGTCTAGATGTTAGAAACTCCTGCAATGATTGTAAAATCCCATTGTCA
TCCCATGCTACTACACCATACTTTATAAGACAGACTAATTAGCCTAATAG
AATGTTATCTATGT

Coding sequence (CDS) from alignment at Sc0000063:1396564..1397377-

>transcript:BL86947_cuf0 ID=transcript:BL86947_cuf0|Name=transcript:BL86947_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=300bp|location=Sequence derived from alignment at Sc0000063:1396564..1397377- (Branchiostoma lanceolatum)
ATGGTTTGTCCATTTTGTCCAGAGGTAGTTGAAGACGAACATCACTTTTT
GATTGTATGTCCCAAATATTTTGATGTACGTAATTCACTATACTCAGTGC
TATCGTCGGATCTACCAGGATTTATCTCAATGGACTTGAATAGCAAATTT
AAGTACATAATGAAATGTGACAACCCATGCATGGTATGCATTGGGAAGTA
TATCAAAGAATGTCTAGATGTTAGAAACTCCTGCAATGATTGTAAAATCC
CATTGTCATCCCATGCTACTACACCATACTTTATAAGACAGACTAATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL86947gene:BL86947Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL86947_cuf0-E1BL86947_cuf0-E1-1564476830-252324Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL86947_cuf0transcript:BL86947_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000063genomeSc0000063:1396564..1397377 -
Properties
Property NameValue
Transcript idBL86947_cuf0
Biotypeprotein_coding