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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86891_cuf3 >transcript:BL86891_cuf3-protein ID=transcript:BL86891_cuf3-protein|Name=transcript:BL86891_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=224bp
LIIRYADKMRRRYITMFMDLGNLSVLRTFRVLRALKTISVVPGLKTIVNA
LIQSVINLRDVIILTSFGLCVFALVGLQLYMGVLRNKCVMEFPENGMNLA
EFCYKFRNHNENALPTDYLHCADDLQMLNGNSELIEQPPWVVDWVSWKDY
FNYSAPLYLNIKGNITLQEKGYCFPPPMDDPLFNKTETVHDVMFEWIDDS
DCNVSVVNATNNPAVWQAWYYNKG Run BLAST on NCBI mRNA from alignment at Sc0000960:2362..17704+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86891_cuf3 ID=transcript:BL86891_cuf3|Name=transcript:BL86891_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=15343bp|location=Sequence derived from alignment at Sc0000960:2362..17704+ (Branchiostoma lanceolatum)
TTCTGATTATCAGATATGCTGACAAAATGCGGCGCCGGTAAAGTACCACA
GTTTGTTGTCGCCTTCTGTAGAACTGCTGACGTTTTAATGTTGCTCAGAA
GTAGATTATGAAGTGTGGCCGCGGCGACTCTGGTGGGAGGACTTATTTGA
CCCCTAATCTCTATAATGAGGGCCTGCATGGGGGGTCCCGACAACGCTCT
ACGCTAAATTCGGAGGGCCGGCTACGTAATACGCTAAATTCAGAAAGCCT
CCCTACGCTCTACGCTGAATTCAGAAAAGCCTCCCTACGCTCTACGCTAA
ATTATGGAGCGGTCGGCAACGCTCTGCGTAAAATTAAAACGGCCGATTAT
GCTCTACGTAAAAGGGGCATGCAGGCCCTTTATAATATCAATATCGAGAG
ATATTTAGCAATTGGGGGTCTGGCATCCAGGCTATGCGACGACTGTTTGT
TCATTATGACACTACAGAAGGTCTCACATGTACATGTAACATTAGTTTAA
CGTTGCTAACTTTTTTTATACAGTCTTCTTTGTAGCAAATATTCAAATGT
AACGGGCTCCTTGCTGGGTGCCCATTACGGAACCCATGGAGAAAATGGCG
TCTGTACGGAAGAAAGTTCCGCACAGGAATTCCAGTACTAAAAAAGTCTC
AGTACCGGAGCTCCTGTGCTGATGACCACTTGTCCATTGCTGAAAAAGGA
ACCTATTACATTTGTATATTTGCTTCTTTGGACAGGAATATAACGTTAGT
TCGTGAACCTAATTAACCTACATGTTACACTTTATACTATTGCCTGTCCA
GGGGTTTCTGTAAAAACCAGCGCCCCGCAGGGCACCCCGAGCCCACGGGG
CACCCCGCGTGGTAACCCGCAGGTACAGTGCCTTCACTAAGCCCAAATGT
TATCATTATTATTATCATAAAGATAAAAACAGGGCTTGGACTTTTGCAAA
TATCGGAATTTGAGGCGAAGTCGATTCAGACCATTTCTATCTCCCGCCGG
CGACAGGTGACAAGACAAACGGAGGCGCCGTCGTTGCCAGTGAGTTGGTG
GGCCGAGGGAAAAACAGCGTTGTGCGCCCCCCTCCCCACTACCAGTGCCG
CACTACAATTCTGGCCGGTCGCATCGGGCTTTTGTTTTCCCCAGTTCACC
TCTAGTTACAGCCACAAAAAAAAAAAACAAGAAAAATCTGAAATACTCCA
GTAGTCACCAGGCTTTCCGTATGTTTTTGTAAACATTGTTGAAGTTTCAT
GATGCCGAGTTACACGCACTTTCTTCCCGCGAAAACTGGTATTGAGACGT
CACGCCGCATCACGAAAATTCGACCAATGACATGCAAGTCTCGCGGTTCA
CGAGATGTAAGCGCGAATCCATGGGATTTTATCGGAAATTGATATTTTTT
GCGAGGAGTTTGAAGGCTTGAATCGGACGAATTTTGATCAAATCAGGTGG
AAGTTACCGGAGAAATTGACCGGGGATCCGGAAAACATTGGATGTCTTGA
GGGCATTTTGTCTAAATGTCTAATTCCCTACTCTCACCTCTCAAATAAAT
GTACCGGTACGTTGTTGTTTTTTCGCCTCAAAATCCGCCCGTTACATTCT
TATTTTAGACGTTACGTTTATTATTTTTTGAAAAATTGGGGCTTTGGGAT
CCCTCTAAAATCGGAAGTTTAGGTTTTTCTGCCCATGTTTCCCCGGTATT
TTTGCTATTTTTCGGCCTAGCGGTGTTGATTTCCCCGCCCGGCGCTATGA
CCCGGCATTTGTGAAATCCTTACGGCACTCATAACATATGGGTCAATCTC
GCTATGATGTTACAAAGTTGACGTTGCTATTGGGCGAAAATAAGACGCCA
CACTGACATTTCAAAATACAATTTTCATGTGAATATCTTTGACAGTCTCT
GTTAACATTATTTACGTCATAAACCAAAGCACGCTGATCAAAAACATGTC
GCCGTAGTTCAGTACACAGGAAAGAATTCAATGACCACTATTGGCAGCGC
GGCAGAAAAATAATTCGTTCACAGAAGACATATTACACGTAAAAACAGCA
ATTATAACTTTACTTCCCTTGTGATATGTGTTTTGAGGCCGCAAAATCTC
AGAAAGGCAGAAATTTGTTGGTAAACAACAGCACGTTTCGCCATCGAAAC
ATGTCGGCGGCACCACCAGGCGTGGTGACAGTAAAACTAGCAGCATATTG
CATAGTGTGTATAATGATCTTTAAAATGATACCGTAAACGCGTGGAAAAT
ATTATATTTTGGGGCAACAATAGACAAAGAATCCCATCTAGTTAAGAAGG
GTTGACATTTTAAAATAACTTGTATTGTGGGCCCAACCTTGGGAACTCGA
AGTCCGAGCGTCTCACAAAAACTTTGTTCTCGACGCTATGGAGCAAAAGT
TTATGGACATAACCCTTTTTTTGGTGTTCATATTTGTTTTTTTAGGGGGT
AATGACTTTAGAAAATATGATTAGGTACAATTAGTTATCTGATGATTTTA
ATGATATGTCAGTAATAATAAATGATAATGATATCCATGTATAACAATTT
ACCTTGATCAATTGCTTCAAGTTCCAAGTAGAAAATACATGTATCATGTA
TACATTTTCACTTGTTGAATTTGAAAGCACCGTTGGCCCCCGGTTAGGGG
TCATAGCGGGGAACCTATGCCCAATTTTTGAAAATTATTATTATAGTTTG
CGAAGTAGCGAGGGAGATCATCATGATTTGAACAATTCACAGCTATGTAC
AGTTTTTATGTTCAATATTTTTATACTTAATAGGTATGGTCCTCAGACAT
AATTGAATAGATATAACCTACCTGCTTATTATCTTATTTCCCTTGGACAG
TTGTATGGACACAGTTTTACCTCGACTGTCAATTTTGAAATTTTCCGGGG
GGTCCTTTATATCAGGGGGTACTTATATTAGATTTTGAAGATTTGTCCCG
GGGGTACTTCTATTCTAGGGGGAACTTCTATTTGAGAGGTGAGAGTATTG
TCTAATTCCCTATCACGAGGGCCTGCATGCCCTTTTTCCGTAAGGCGTAA
TCAGGCCGTTTTAGACTTCGTAATCCGTAATCAGCCACCCAAAATCAACG
TAATTCGTAATCGGTACATTGGCCGTAACGCGTAATTGGTCACTTTGATT
CAACGTAAAACGTAGGCAGTTACCTTTATGCAACGTAAAACGTAATCTAC
CAGCAAAATGTAGGCTTATTTCCAGCAAAGTCTCCTGGCAAAGTTGCCCC
TCAAGATGCAGGAAATAGCATTTCAGAGGGTAAAGATCTCAAAATTTTCC
CGTGAAACATGCGCCCAGACCCACTTAGTATTGTCGCGCCTCTGGTAAAA
AATATGTTCTGAGGGTGTCGCCCCCAAATGTCAAGCTGGAATCATTGTGT
ATTTTTCAATCAAAGAGATGCCATAAAACATAGCTTAGATTACCAGCCAA
ATGTGCCCCTGAAAATGCAGGAAATAGCGTTTCAAAGGGTAAAATTTCAA
AATTTTCTTGGGGTGCATGCCGTCGGGCCCACCTGCGATTGTTACATGCA
CGCCTCCGGCGAAAATATGTCGGGAGGGCAAACAATCTAGCAGAAACCCT
TGTGTACTTTTCACTATAAGTGCAGATATTGCCCCTCAAAATGTATTTGA
GCGGGTCGAGATTTTACCATTTTCCCGGGTATTCTCTCGGATCCACCTAC
AATCGCCGGGCCGCTCCGGCGCGATATATGTCGGGACTCGGGGCATTGCG
CACCATACCATTAAACTCTTGTATATTCTTTTCACTTATAGATATGTCAT
CAAACATAGCTTAGTGTAACAGCAAAATTTGGCACTCAAAATCAAGGTTA
TANAGGGAAGAGAACAACAGACTACGTAATCGAGTTCAACACCTAGAGGA
CCTGACTACCTCTCTCCAATCCAAGTCATCAGACATTCAAAGGAACATGA
GTGAGGTGAAAACTTCCCAGGGAAGCCTGAAAGTAAAGGTGGCTAATATG
AAAGATGCCATTCTGGATAAGGTCACGTCTACGATCAGCGACCAGCTTCC
AAGCAACCAAAACACAGTGCTGGAATACGCTGTCGCCACCTCAAATAGGT
TTGAGGCACTGCAAGGCTCCCCCTCCCAGCTGAGTTCCAGTACCACAGAC
CTAGAAACAGACCCCAAAGCCCTGATACAGTCTATAACCAACACCAGGGC
TCACACCAACCCGCGTCCCCAGCACTCTACACAGAAGTCTAAACGCGTGG
TGATAATCGGCGATTCGAACGCAAAGAAGCTCAAACCAGGTCTGCTAAGC
CCTACAGCTGATGTGCCAAGGCCGTACTGGGCCCCCACCCTACCAGCTAC
CTTGTCTGCTCTGGAGACGATTTCCAAGGAAACGTCACCACCAAGTACAG
TCGTCCTACATGTCGGAACTAATGACACCGTAACCAAGTCTAAAGAAGAG
ATCATTGACGACTTTGACACCACAATCAGCTCCACCCAGTCCCTTTTCCC
TAACGCTGACGTGGTGGTTTCGGCTGTACCTCCGAGAAGAAGCTCCAGAG
AGAACCCAGACATCAATGAAAACATCATGGCTATCAACAAACACCTACAG
GACAGATGCCAGGCAAACGCTTCCTTTACTTTTGTTAACCATGCAAAACT
GTGGAGCAATAATGACCACAACAAGGAAATGTTCGAGCGGGACGGATACC
ATCTGAACGCGGACGGCGTCAGAGTGCTCGCCTACAACATTAAGAAACAA
GCCACGGGGCCCCTCGGACTGCAACCAAGAAACCTGGCGAATGAACGACG
CCAGGAGAACGGAAGCTCTCCACCGTCCACCCCGCGGCATCAGAGCAGAA
GGTACGAACACTCTAAGGGGAGGAGAACCGGTACCGCAAAGCCGAACATG
ACGCGCGCACAACACGGTCAGCAGGGACACGCTCCACAGAGAGACTCCAG
GCGCGAGGTTGTCACGTACGACGCCCCTGAACGTGGCAGACAGGAACCGC
CCGTTCAAGGGTACAACCAGGCCTACCAGGACGCTCCACAACGGACACCG
TTCATGCGTGTGCCGCGCCCCCTCGGTCCCTACCATCCCTCCCCTATGTA
TACCGAATGGGACAGGGAGTGGCCATCCTTAACGGAAGTGTACGATGGCA
ACTACAGCTACCCGCGTCCCATGTGGTTTGGACTCCCCCCACCCCCGCGC
TACAACAGCAGGCCGTGTGAGGCACCACCATTCTACAACGGACCCTATGG
AGCACCGCCGCCCTACCGTGACAGCGGGCCGTATCATGGATCATTTTCCA
GACCCAGTAATGGAAGACCTCAAGGTTCGAACTGATGTATCGTCCAGAAA
ACACGACGTACAGTAAGAGAAATAGGAACTCTAGACCTATCCCCAAAAGC
CATGGGATATCCTTTGGCTTTTGGAATGTACACGGACTCGGTAACAAAGT
AGAAGATAGTGATTTTGTAAGTCAGATAGAAGGGTTTGATTTCTTTTCCA
TCCTCGAGACTTGGCATACAGGTGAGAAACATTTCCCCAACTTTTTATGT
TTTAGTAGTGTTAGAACCAAAACTAGGAAAGCTAAACGTAGTTCCGGCGG
TATCATATTCCTGTTTAAAAAGCAATACAAAAACTTCGTTACAAAATTAG
ACAGCAAATCAGAGGATATTCTCTGGGTAAAAGTCAGCAAAGAATTGTTA
AATATAGACGAAGATATCTTCCTAGCATCCGTTTATATAAGCCCAAATAG
ATCCACAATTCATTCCAATAGAACATATGACATTTTTGACGTACTTGAAA
ACGAAATAGCTTATTATAAAAACTATGGCGAGGTGATAGTAGGGGGAGAC
TTGAATGCACGCGTGGGTAACCTAAAAGATTACATTGAAGATGATTGGCC
AATTGACAGCCTTCCAGAGGACTATGATTTCGACAGTCCGTTGCCCCGTA
ATAATATGGACACAAGTACCCCCACTATTTTCGGTAAAAATTTGATTGAG
CTATGTACCAACAGTAAGTTAAGAATTCTAAATGGCAGAGCACCCGGAGA
CGCACTAGGCAAACCCACATGCTATCAGCCAAACGGGTCTAGTGTAGTCG
ACTATGTTCTTGTCAGTGAAAAATTTCTTTTTCGTAAAGTTTCTCTGTTC
CATGTCCACCCATTAACACCTCTTTCGGATCACTGTAAACTCTCACTGAT
TCTGCATTGTAATTCAAAACCGTTGCCCAAAAAATCCTCTCTTCCCATTC
GGCCACACCGTAAATTTGTGTGGAGCGCCGACTCTAAAGAAAAGTTCAAG
GAAATTGTCAATACCCTCGAATTTACTTTCAATGTAGAAAACGTTATGAA
AAACAGTCAAGAAACGTTAACCACGCCGAATTTGAACTCAATCGAAAATA
CACTCACTGGTCTGTCATCGTTACTACAGGAAGCTGGTAAAAAATCACTA
AAATTACGATGTACAAGACAAGGCACAAATCAGCATAACAAACACAAAAA
CAAGAAAAACTGGTTTAATGACAACTGTGCAACGGCCAGACGTAACCTAA
ACAATCTTGGTAAATTACTTTCAAAAAACTCCCGTGACCCTTTCATTAGA
GGCAAGTACTTCAAAATGAAAAAAGATTACACTCGACTTATAAGAAAAAC
GAAAAGGTCATACAAAGACAATATTCTACAACAGCTTAATTCCCAAACCG
GCAACAATCCTTCAACATTTTGGCAACTAATCAAACAATTTAAAACAACT
GATCGTGTATCCACTGAGGAAGCAGTGGACAGTCAAGCTCTCCATACATA
CTTCAAACAGTTGTATGGAAGTGATGAAAAATCCAACTTACCCAAAACAA
ACAACAGCTTCCATATTCACATTGAAAATAAACTGAATGAAATGGAAACC
GAACTGTCAAAACACAACCCTTTGGATACAGTAATACAAGCCAGCGAAAT
CAATCAAGCAATCTCACAATTAAAGAATGGTAAAGCCTCAGGCAATGATC
TTATATTAAATGAAATGTTGAAATGTGCCGCACATGTTCTAACAAAGCCG
TTAGCAATTTTATTCAACCTAATCATGTCATCAGGCCACTTCCCTAAACA
ATGGTGTGAAAGCCACATCGTGCCACTTCACAAAGGAGGCTCTAAAGAGG
ACCTGAATAATTATAGAGGAATTTCTGTAACAAGTTGCCTAGCCAAATTG
TTTACCACAATACTGAACACCAGCCTCTCTAACTATTTAGACGAGCATTC
ACTTCTCTCCCCAAACCAATCAGGATTTCAAAAGAATTTTGGAACACGAG
ATAACATTTTCGTTGTTGACTCCTTAACATCTAAACACGTTAATTCCAAT
AAACGCCTATATCTTGTTTTGTAGACTTCAGGAAAGCTTTCGACAGTGTG
TGGAGAGAAGGCCTTCGCTATAAAATACTCAGCTCAGGAATAGGTAGAAA
ATTCAAAAATCTATGAATTAATCAAATCCATGTATTCTAACTCCCAGACG
TGTGTCAAAACTTCCACAGGTCTCACTCCTTTATTCGACACAGATAGAGG
TGTAAAGCAGGGCTGTAATCTCAGCCCTACACCTTTCAACCTGTTTATTA
ATGACCTTGTCAAAGAGTTAGATAACCCCGAATGCGTACCTCCCACTTTG
CACAATCTTTTTGTCTCTTGTCTACTTTATGCCGATGACGTGGTGACTTT
CTCAGAGACCGAAGAAGGGTTACAACATGCTTTAGACAGACTTGATATGT
TTTGCACAAAATGGAAATTACAACGATACAAGTGAATCAGAAAAAAACAA
AAGTGGTGATTTTTAACAAAACTGGACGCCTATTCAAGGACGTGAATTTT
TTCATTGGTTCAGAGAGCATTGAAACCGCAAGTTCTTACTGCTATTTAGG
TTTGATGTTGTCGTCATTGGGCAGTTTTTCTCTTGCCAAAAATCAATTAT
CACAAAAATCACGTAAAGCCATTTTCAGCCATTTGATTCGCTCACCATTG
TCTCCTAAGGCCCTGTTAAGGATAAACAATGCATGTATTAAGTCTATCAT
GTTGTACGGTTGCGAAATCTGGGGAAAGGATTACAGTGAACAATAAGTGT
CCTATCGAGATAATTCAAAACAGATTTTGTAATAATATACTTGGTGTCCA
AAGAAGCTCAAGTAACGTAGCATGTAGAGCGGAGCTGGGTATATTTCCAG
TCAATCTAGATGTTTCAGTCCGCATTGTCAAATACTGGCTACGACTCAGA
CAACTAGACATTTCCTCACATCCTCTCCAAGAAGACGCACTTCTGTCACA
ACTGTGAATAATCGTAGGAAAAACTGGACTCAACATGTAAAGAAAGTACT
TGACAATTGTGGCAGCTCATACATTTGGTATACCGACAACCCTAATAAAG
ACATTAGACAGACATGTGCACTGTTAAGAAGAAGATTAGAAGATATGTAT
ATTCAAACAAATATAAGCTGGTGTGTTACGCCGAAGGGCAGTTATAACGG
CTATACAGATACAGATACATTCTTTCATAACCTGTTGAAAGATGAAGGAA
AACTAAGATTTTACAAAAACGTAAAAACGATCTACGACATGGAAAATTAT
CTGTATCATAATGACTTTGACCAACGTGCGGCAATATGTAAGATAAGAAT
TAGCGCGCACCCATTAGAAATAGAGAAAGGGAGATACAAAAAGCTACCGG
TCCAGGACAGAACATGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCGGCCACATGTTACAGCTGTAGTGACTGTCGCTAATCT
TTCTGAATGTGGCTTGGACAATGAGATATGCATACAGACCCCCATTTATC
CAATCAGTGCGCTTCATTTTTATTCTTATTCATTGGTTTGTTTATTTGAC
AAAACAATTGATACAATAAAATCTTACAATATTGCCATCACCTCGCAGCC
TTATTACAGACAGCTGAAATGTGTGAACAATGGCATTTATGAAACAATGA
CAGTAAAATATGTAACTTTACAATAAAATTCTTTGTACTTTTTCATTTAC
ATTCAATATCCTTTAATATGTGAACACTTTATAGTTCCAGCATGTGAATT
CATTACTGTGACAGCTAAACATTCTTTGATGGAGGAGGACCTGAAGATTG
GAGACATCCCTGTGTTCTCCCTTTATTGTCCTACCTTTATTCATGCCTCC
CTATATTCCATCTTGTTTTCTAAAATGGTCATAGTTGTTAGTTGACAGTA
CAAGGGTGGACGAGAACAATTGAGTGGTTCATACATATATCTTATGGCAT
GTTGTTGTGGGCTATTATTGTTAGTGTTATTAATACTTAATCCAATGAAT
CCAATGTGCACCCAAAGTTTCCTGAAAAAGTTCAGAAGATTCGTTATATC
AGCTGATATGTCAGTGCTATGAATGTTTGATATGTTATCATTTTGTACTT
AGAAAATCCTGGAAAAATATCTACTCCCATACTGTGTAATTCTGTGACCT
TTTCCAACTGACCCATATTGTACAACCTACATGTACCCATATTGTACAAG
CTACATGTACCCATATTGTACAACCTGCCCATATTGTACAACCTACCCAT
ATTGTACAACCTGCCCATATTGTACAACAACCCATGTTATACAACCTACC
CATGCTGTACAACCTACCCATATTGTACAACCTACCCATATTGTACAACC
TACCCACATTGTACAACCTACCCACATTGTACAACCTACCCATATTGTAC
AACTTACCCATATTGTACAACCTACCCATACCCATATATTGTACAACCTG
CATCTACCCATATTGTACAACCTGCCCGTATTGTACAACCTACATGTATC
CTTATTGTACAACCTACCCATATTATACAACCTACCCATGATATTGTACA
GCCTACCCACATTGTACAACCTTCATATACCCATATTGTACAACCTGCCC
ATATTGTACAACCTACCCATATTGTACGTAACCTACCCATATTGTACAAC
CTACCCATATTGTACAACCTACCCATATTGTACAACCTACCCACATTGTA
CAACCTACCCATATTGTACAACCTACCCACATTATACAACCTACCCATAC
TAGTATTGTACAACCTACCCATATTGTACAACGTACTAGTACCCATATTG
TACAGCCTACCCACATTATACAACCTACCCATACTAGTATTGTACAACCT
ACCCATATTGTACAACGTACTAGTACCCATATTGTACAGCCTACCCATAT
ACCTAGTATATTGTACAACCCTCATCCGCACTTATTATTAGATCCCAAGT
GAACCTGAAAACATTATTTTGCAAATGAATTTCTTGGGAGGGGGTATACA
AACATGTGTAAATGGAAACATATATATGTATGTATGTATGTATGTTTGTG
CGTGCGTGCGTGCATGCATACATACATACATATATACATACATACATGTT
ATGTATACTGTCTTTTGGTTTAGTTTGATAGTCATTGATGATATAGTATT
CCCTAACTTTTAGACCAAGATGGTTCTCCCATCCCCCCTCAAGTAAAACT
TACCCACATCTACTTCAAGACTGACAAAGGGATGGCATGCAAATCATTTG
GCACCCACTTTTATTTAAAAAGATGATCCTTCCGTACATTTGTTTCTGTC
TTCCTCTACAGATACATCACAATGTTCGTAGACTTGGGCAACCTCTCCGT
TTTGAGAACATTTCGAGTGCTTAGGGCTTTGAAGACAATATCAGTGGTGC
CTGGTGAGTGGTTGATAATCTACTAGCTTGGATCAACTCTAACGTGTCAT
ATCCTTGCTCTCTTTGTCACAGATACATCACAATGTTCATGGATTTGGGT
AATCTCTCCGTTTTAAGAACGTTTCGAGTGCTTAGAGCTTTGAAGACAAT
TTCAGTGGTGCCTGGTAAGTACTGGTTATAATGTATCTTATTGTCACCAC
CTGGCACAGAATTGGGGGTGCACAATTAACCCTCATACACCCAAATGGGG
TCATTTTTGACCCCAGGCGTGGATTTTGACGTACCATTTGAACATGTTTG
ATGTGAGAAAAAATTCCTTTCGTGACTTTGTCAGTAGACATTTTTTCTAA
CCTCTCCTAATTTTCTAGGGAGATCGGCACAATACTGTTGACATTATTTT
TGGAAAGTCTGTGTTGAGTCCACTGGGGTCATTTTTGACCCCAGCAAAAA
TAATGTGCTGTTTTTGAGACCTGCCCTCTGTAACTCCTAAACTACTCATT
GTATGACCACCAAATTTTCAGAGGATGATGCACATGTGAATCGATATTAC
CATTATAACAAATTTTATGTCATAATGACGTAATATGATGTCATTATGAC
ATAATTTTATGTGATTCTATCTGCCATCTTGGATTTTGACCGATGATGTC
ATCAAATCAGCTTAAAACATCAATGTTAAATCATAAAAGTTACATCGGAT
TACATAGAATGATGACAATGTAAAGAAATCAATGTGCCGTACCAACAAAC
CCTCGAAACGTCATTGTTTGAACTGAAATTAGCAGATTTTGTAAAACATG
CCTGTCAAAAACCTGTTGCCATGGCTACACGAAAAATGATGAACTTACTT
TTAATTTGAAATTTTTGTTAAGGACGTTTTATTAAAAAAATACCACGTTT
GTTGGCTCTAGCGTAAGCCGTTCAGTAACTATGCAACATTAATTTCGGCA
TGGGCTTCAAAAATCCCCTCCCGGACTAAATAGGAATAGTTCAAGACTTG
GTCCTTCTGATCTTTTTGCATAAATTATGGTAATGAACAGGAATTATTTA
AACCTTAACATGCCAAAACATTCCTCTTACATTGATGAACCAATGTACGG
ATAACAATCATCGAAAAAAGTGAAAAGGGAGATTTTACTGAACAAAACAT
TTTGGGGTCATTTTTGACCCCGTTCAGTCATTTTAGTCGCAAAAATAGGT
TCGGGTGTATGAGGGTTTTAAACACTGGAAAGTATGTCTGGCACTGGCCA
ACACCATAAACCACACTGTGTTCTCTAAAACCTTATTTCCGCTCTTTATC
TCCACTGTTGAATATGATTATCATATTGATATCTATTGATAGCACAACTT
CCTACATCCTTAGCTTTACACAATCATCTCTGGTACAGGGTTCTCACATA
AAAGAGCATGCAAATGGCTAAATTCAAACTTCGAGAGAAATTGGAAGGGC
TATGAGACTATCCCAGTTGCTGTTGAGTAGAAAACACACAATGTCTAACA
TTCAAGCTGAGCTGCTATTGTATGATAGAGTCTGCCTATTTTCTTATAAT
CTCCACAGTACATATAATATGGTACAAAAAAGATCCTCGTGAGACAATTT
TGTTTCGTAGCAGTGAAATAGTTCAGTTGCTGCCAAGTGTTGTGTGATGG
AAAATACTGCTTGCTTGATGATGCTCTTTGCCCATAAAAATCATATATAT
AACGTTATGTACACACCCCCAACAATCTCTGTACAGTTGCTCTATTATAC
ACGTATGTAAAACCTGTGACCTGTAACCTATTCTATCATCGCAACTGTTG
TTTGTCGTGTTGGTGAGGAAAATTGTACAATGAAAAAAAGTTCAGCATGT
TTAGAATTTCCTCTTTGATTAATGTGTTGCCAAATGACACTCTTATATTT
CAATCTCAAAATATTCATTGCTGCCATGGTAATAAATAATCTAACTGAAA
ACTATGTTCTACCTAAATATGTAGATGGCATAATGTGCATAACTACACAT
CTGAGAATGTTCATCCCAAGCAAAGTTTTGTAAGTCCTTGAGTATGAAAT
GTCAATCATGTGACACATACATCATGTCCTCTTAAAGGCCCCAATTGTAA
GATCGGAGGATTAAAAAGTAAATGTTTGGTCTTTTTTTACAAGTATGCTA
TTACACCACTTACGCCTTACATCTTGCCACAATATTCACATGATTGGGAA
TGCACACCAAGACAGACAAACAGACACATCAATTGACTGCAATACCTCCA
TTTTCATGGAGGTCATAAGTTCACAAATTCATTATGGCGCACAAACGAAC
TGAAACCCGAGATTTGTTCACAAATTGAATTTGTCTTGAGTACCAAACTA
ATCATGACTTTCTTGTTGTTGTTTTTTTGTATTGGTCATCTTTTGACCAT
CTTTTGACCATAGATTAACACCTAAAATGTGATGTAATGACAAAAACATG
TTTTAAAAGTTGTCATAAGGCAAATTTTGTTCTGCACATTATGTCCTAAT
TCAATGCATGATTTTTAAGTAATGAAACTTTCCCCTACCAAAACACTTGG
TGATCAAGGTTACACACACTCACCTCCTTGATATACCTGTAGCTCCCAAG
TACATCCAGATACAACGCCAGTACTATCATAGGAAATCTTTCTGGAAAAT
GATGACAATGTGTGAGAAAGGAGAAATTGCCATCTTTAAGTGATTTCTGC
AAAAAATAATCCAGTTACATTCAAAGTCCTTCTTTTAAAGGACATTTCAG
CTGTTGCAGTGTAAATGAAACTTTGCAAATGTGGTATATAAAAACATGGT
CCTAAGCTTTTGATGGCACCAAAAGAAACACCTTTCTGAACCCTTGTGCA
GTTATAATGTTTAGGTGGCATAACATTCATTTACTGTTCAATTAGCATGG
AATTCACTCTAAGTCTAACTGAATGTGTCTTTATGTGTCTTCTCCAGGTT
TAAAAACCATCGTTAACGCCTTAATTCAGTCTGTCATCAACCTCCGTGAT
GTCATCATTCTGACATCCTTCGGCCTGTGTGTGTTTGCCTTAGTTGGGTT
GCAGTTGTACATGGGGGTGCTACGAAACAAGTGTGTCATGGAGTTCCCAG
AAAATGGAATGAACTTGGCAGAGTTCTGTTACAAATTCCGCAACCATAAC
GAAAACGCGTTGCCAACTGATTACCTGCATTGTGCAGATGACTTGCAAAT
GCTGAATGGCAACAGTGAACTAATTGAGCAACCTCCTTGGGTGGTAGATT
GGGTGAGCTGGAAAGACTACTTCAATTATTCCGCACCACTTTACCTGAAT
ATCAAAGGGAATATTACTTTACAAGAGAAGGGATACTGCTTCCCACCACC
CATGGATGACCCATTATTCAACAAGACGGAGACGGTTCACGATGTGATGT
TTGAATGGATAGATGACAGTGACTGCAATGTTAGCGTAGTGAATGCAACC
AACAACCCAGCTGTCTGGCAAGCCTGGTATTATAATAAAGGTA Coding sequence (CDS) from alignment at Sc0000960:2362..17704+ >transcript:BL86891_cuf3 ID=transcript:BL86891_cuf3|Name=transcript:BL86891_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=2016bp|location=Sequence derived from alignment at Sc0000960:2362..17704+ (Branchiostoma lanceolatum)
CTGATTATCAGATATGCTGACAAAATGCGGCGCCGATACATCACAATGTT
CATGGATTTGGGTAATCTCTCCGTTTTAAGAACGTTTCGAGTGCTTAGAG
CTTTGAAGACAATTTCAGTGGTGCCTGGTTTAAAAACCATCGTTAACGCC
TTAATTCAGTCTGTCATCAACCTCCGTGATGTCATCATTCTGACATCCTT
CGGCCTGTGTGTGTTTGCCTTAGTTGGGTTGCAGTTGTACATGGGGGTGC
TACGAAACAAGTGTGTCATGGAGTTCCCAGAAAATGGAATGAACTTGGCA
GAGTTCTGTTACAAATTCCGCAACCATAACGAAAACGCGTTGCCAACTGA
TTACCTGCATTGTGCAGATGACTTGCAAATGCTGAATGGCAACAGTGAAC
TAATTGAGCAACCTCCTTGGGTGGTAGATTGGGTGAGCTGGAAAGACTAC
TTCAATTATTCCGCACCACTTTACCTGAATATCAAAGGGAATATTACTTT
ACAAGAGAAGGGATACTGCTTCCCACCACCCATGGATGACCCATTATTCA
ACAAGACGGAGACGGTTCACGATGTGATGTTTGAATGGATAGATGACAGT
GACTGCAATGTTAGCGTAGTGAATGCAACCAACAACCCAGCTGTCTGGCA
AGCCTGGTATTATAATAAAGGTCTGATTATCAGATATGCTGACAAAATGC
GGCGCCGATACATCACAATGTTCATGGATTTGGGTAATCTCTCCGTTTTA
AGAACGTTTCGAGTGCTTAGAGCTTTGAAGACAATTTCAGTGGTGCCTGG
TTTAAAAACCATCGTTAACGCCTTAATTCAGTCTGTCATCAACCTCCGTG
ATGTCATCATTCTGACATCCTTCGGCCTGTGTGTGTTTGCCTTAGTTGGG
TTGCAGTTGTACATGGGGGTGCTACGAAACAAGTGTGTCATGGAGTTCCC
AGAAAATGGAATGAACTTGGCAGAGTTCTGTTACAAATTCCGCAACCATA
ACGAAAACGCGTTGCCAACTGATTACCTGCATTGTGCAGATGACTTGCAA
ATGCTGAATGGCAACAGTGAACTAATTGAGCAACCTCCTTGGGTGGTAGA
TTGGGTGAGCTGGAAAGACTACTTCAATTATTCCGCACCACTTTACCTGA
ATATCAAAGGGAATATTACTTTACAAGAGAAGGGATACTGCTTCCCACCA
CCCATGGATGACCCATTATTCAACAAGACGGAGACGGTTCACGATGTGAT
GTTTGAATGGATAGATGACAGTGACTGCAATGTTAGCGTAGTGAATGCAA
CCAACAACCCAGCTGTCTGGCAAGCCTGGTATTATAATAAAGGTCTGATT
ATCAGATATGCTGACAAAATGCGGCGCCGATACATCACAATGTTCATGGA
TTTGGGTAATCTCTCCGTTTTAAGAACGTTTCGAGTGCTTAGAGCTTTGA
AGACAATTTCAGTGGTGCCTGGTTTAAAAACCATCGTTAACGCCTTAATT
CAGTCTGTCATCAACCTCCGTGATGTCATCATTCTGACATCCTTCGGCCT
GTGTGTGTTTGCCTTAGTTGGGTTGCAGTTGTACATGGGGGTGCTACGAA
ACAAGTGTGTCATGGAGTTCCCAGAAAATGGAATGAACTTGGCAGAGTTC
TGTTACAAATTCCGCAACCATAACGAAAACGCGTTGCCAACTGATTACCT
GCATTGTGCAGATGACTTGCAAATGCTGAATGGCAACAGTGAACTAATTG
AGCAACCTCCTTGGGTGGTAGATTGGGTGAGCTGGAAAGACTACTTCAAT
TATTCCGCACCACTTTACCTGAATATCAAAGGGAATATTACTTTACAAGA
GAAGGGATACTGCTTCCCACCACCCATGGATGACCCATTATTCAACAAGA
CGGAGACGGTTCACGATGTGATGTTTGAATGGATAGATGACAGTGACTGC
AATGTTAGCGTAGTGAATGCAACCAACAACCCAGCTGTCTGGCAAGCCTG
GTATTATAATAAAGGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000960 | genome | Sc0000960:2362..17704 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86891_cuf3 |
| Biotype | protein_coding |
|
