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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86806_cuf0 >transcript:BL86806_cuf0-protein ID=transcript:BL86806_cuf0-protein|Name=transcript:BL86806_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=154bp
DKKKAYQAPSWKEGQKDICCHPLPKKESGTLSDSLIIPGQVGHSDDQPPL
YKELLVGPVDSPTTSSNPVYPCQSTDVIFTETDHPEQWEPPTRLTLVMAK
NHPFHDLTSRARRKKPTKTFSTKLGAPLKGQNGVRQYHRTDLSKILPHER
IGLL Run BLAST on NCBI mRNA from alignment at Sc0000267:247657..249272- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86806_cuf0 ID=transcript:BL86806_cuf0|Name=transcript:BL86806_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1616bp|location=Sequence derived from alignment at Sc0000267:247657..249272- (Branchiostoma lanceolatum)
TGACAAGAAAAAAGCCTATCAAGCTCCATCTTGGAAAGAAGGACAAAAGG
ACATATGCTGCCATCCCCTTCCCAAAAAGGAAAGTGGTACATTGTCTGAC
TCCCTTATCATCCCCGGCCAAGTTGGGCACTCAGACGACCAGCCCCCGTT
GTACAAGGAACTCTTAGTTGGCAAAAAAAGATTTCAGTACTTATGGGTAC
AGGTGACTCACAAACAAACCTGGGTACATCTATTTGGAGTAAGACATTAA
CATCCTTCTCACATAACCAATGCAATATTCATACAGAAATTTGAAAGTAT
AGTGTTCAACTGGCAGAATTTGATAGCAGCATTATTGTATGACTACTATC
ACAGATCTTATAAGGTCTTGGAGTCTTCATGTGTGCTCATGTGGTAGTTT
ACTTCATGTCCATTTTTGTTCTTGTAGATTGTGATAATTTCTAATCTACA
AAAGAGTCATTCATTCAGTAGGCAAGCAGAAATCAATAACAACTTGAATT
TCAAAGGGACATTGATCCATGACACGCTATTTGCCAATAAAGTCACAGTT
TATTACTCTATATCTGTAAACCTTATGCTTAAAAGTTATAACACATTAAG
TACCGTAGTAACAGTAATTTTATTCTATTTCAGGGCCCGTGGATTCCCCA
ACGACAAGTAGCAATCCTGTCTACCCCTGTCAAAGTACAGATGTCATCTT
TACAGAAACAGACCACCCTGAACAGTGGGAACCACCAACTAGGCTGACTC
TTGTGATGGCAAAAAACCATCCCTTTCATGATCTGACATCAAGGGCTCGC
CGCAAGAAACCAACGAAGACTTTTTCTACTAAACTTGGTGCTCCTTTGAA
GGGGCAGAATGGTGTAAGGCAGTACCATAGAACAGATCTTTCAAAGATCC
TGCCTCATGAGCGAATTGGTCTTCTATAAGTAACGTGAAACTTCACTGCT
GTATTCAAAATTTCAATGTAATTTTTTTCTCCATTTTGCCAAACATTATC
TTATTTCAAAGTGGAATGATTGTCGCATTGTCAAAATCATTAATTGATTT
GCTCTGTGTCTGAGGTTGTGTCTTCTGTAGTGGGAAGCAGGTATATTTTT
CCCCACAGATGTCACACAAGACGATGTTTGATTCTAAAAGGGGAAAAGTG
AGATATCTGTTATTTTAGTATGCACACATAGTTTGTTCATGTATACAAAA
TATGTGACAGTGTGAAGGGCTCAAAAGAAAAAAAAGTACCAACAAACAAC
TTAAAAATCTGCATAAAACACATTGACATGTAACAATGTACTTTTACTGT
CAACTTCTTATAATCAGTAACTGTAAATTTGGAACAAAATTTCACTCAGT
CTGACACCTGTTATTCACTCATATTGCAAATCCTCCCAGAGTTATCTATG
ACGCTGGTACCCAAGCTATCAATCACTGGCCAAGTTTAAGAGAAACAGTC
ATAAAATTGTGGTACACAGGGATGAAACAATNAAGCTATCAATCACTGGT
TTTAAGAGAAATAGAGTCATAAAATTGTGGTACACAGGGATGTAACAATG
CGCATGCAATGCACTTTTTCAATATTGAATGATACAATGAAACAAGTATA
TGAAAGTAGATATTCT Coding sequence (CDS) from alignment at Sc0000267:247657..249272- >transcript:BL86806_cuf0 ID=transcript:BL86806_cuf0|Name=transcript:BL86806_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=930bp|location=Sequence derived from alignment at Sc0000267:247657..249272- (Branchiostoma lanceolatum)
GACAAGAAAAAAGCCTATCAAGCTCCATCTTGGAAAGAAGGACAAAAGGA
CATATGCTGCCATCCCCTTCCCAAAAAGGAAAGTGGTACATTGTCTGACT
CCCTTATCATCCCCGGCCAAGTTGGGCACTCAGACGACCAGCCCCCGTTG
TACAAGGAACTCTTAGTTGGGCCCGTGGATTCCCCAACGACAAGTAGCAA
TCCTGTCTACCCCTGTCAAAGTACAGATGTCATCTTTACAGAAACAGACC
ACCCTGAACAGTGGGAACCACCAACTAGGCTGACTCTTGTGATGGCAAAA
AACCATCCCTTTCATGATCTGACATCAAGGGCTCGCCGCAAGAAACCAAC
GAAGACTTTTTCTACTAAACTTGGTGCTCCTTTGAAGGGGCAGAATGGTG
TAAGGCAGTACCATAGAACAGATCTTTCAAAGATCCTGCCTCATGAGCGA
ATTGGTCTTCTATAAGACAAGAAAAAAGCCTATCAAGCTCCATCTTGGAA
AGAAGGACAAAAGGACATATGCTGCCATCCCCTTCCCAAAAAGGAAAGTG
GTACATTGTCTGACTCCCTTATCATCCCCGGCCAAGTTGGGCACTCAGAC
GACCAGCCCCCGTTGTACAAGGAACTCTTAGTTGGGCCCGTGGATTCCCC
AACGACAAGTAGCAATCCTGTCTACCCCTGTCAAAGTACAGATGTCATCT
TTACAGAAACAGACCACCCTGAACAGTGGGAACCACCAACTAGGCTGACT
CTTGTGATGGCAAAAAACCATCCCTTTCATGATCTGACATCAAGGGCTCG
CCGCAAGAAACCAACGAAGACTTTTTCTACTAAACTTGGTGCTCCTTTGA
AGGGGCAGAATGGTGTAAGGCAGTACCATAGAACAGATCTTTCAAAGATC
CTGCCTCATGAGCGAATTGGTCTTCTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000267 | genome | Sc0000267:247657..249272 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86806_cuf0 |
| Biotype | protein_coding |
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