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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86708_cuf0 >transcript:BL86708_cuf0-protein ID=transcript:BL86708_cuf0-protein|Name=transcript:BL86708_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=363bp
IYAPNSDDPDFFYNLETTIHNHIASDLNTIIVGDFNTILNPEIDRAGHHA
AVYHPKCRTAINSLCANLDLHDIYRYYNPRTTRYTWRRRYQASRIDYFLT
SFSLTSAIGNACVEDSLRSDHSLIGLTVTTSTIPRGRGYWRLNQDLLYDK
TFIKETSEFITDFFHFNVNSASPHVVWEAFKCAIRGHIIKFSSWKAKQNK
DTVFSLSGEIDKLQKVLDTHFNSDTFQILQNKKQQLELLYQTKSSNMIRG
GRAKWMEHGEKCTKLFLNLINRGNMRKNVTKLVTAEGLVMTDPQDILIEQ
VKFFSDLYSFKESPMSLESDTFKYFFPDPPHVSVSIDQRDSCEGEITEKE
LKESIESFSSGKA Run BLAST on NCBI mRNA from alignment at Sc0000292:107597..108686+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86708_cuf0 ID=transcript:BL86708_cuf0|Name=transcript:BL86708_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1090bp|location=Sequence derived from alignment at Sc0000292:107597..108686+ (Branchiostoma lanceolatum)
TATTTATGCCCCTAACTCTGATGACCCAGACTTCTTCTATAACCTTGAAA
CAACAATACACAATCACATAGCGTCAGATCTAAATACTATTATTGTTGGT
GATTTTAATACTATATTGAACCCGGAGATTGACAGAGCTGGGCATCACGC
TGCAGTTTATCACCCTAAGTGTCGTACAGCAATTAATTCTTTATGCGCTA
ATTTAGATTTACATGATATTTATAGATATTATAACCCCAGAACAACACGT
TATACTTGGAGACGGAGGTACCAGGCCAGTAGAATTGACTATTTTTTAAC
TTCTTTTTCCTTAACTTCTGCTATAGGTAACGCTTGTGTAGAGGATAGTT
TAAGGTCGGACCATTCGCTCATTGGTCTCACTGTTACCACTTCTACTATA
CCTCGCGGACGTGGGTATTGGAGGCTGAACCAGGATTTGTTATACGATAA
AACTTTTATAAAGGAAACCTCAGAATTCATAACAGATTTTTTCCATTTCA
ATGTTAATTCTGCTAGTCCACACGTTGTGTGGGAAGCTTTTAAATGTGCC
ATTCGCGGACATATTATTAAATTTTCTTCATGGAAAGCTAAACAAAATAA
AGATACTGTATTTTCTCTCTCTGGGGAGATCGACAAACTGCAAAAAGTAT
TAGATACACATTTTAACTCAGACACCTTTCAAATATTACAAAATAAAAAA
CAGCAATTAGAATTACTATACCAAACTAAATCCAGTAACATGATCAGAGG
GGGGAGGGCCAAGTGGATGGAACACGGGGAAAAATGTACAAAACTCTTTT
TGAATCTTATAAATAGAGGAAACATGCGGAAGAATGTAACTAAACTCGTT
ACGGCTGAGGGATTGGTCATGACCGACCCTCAAGATATTTTAATCGAACA
AGTTAAGTTTTTTTCCGACCTTTATTCTTTCAAAGAATCTCCGATGTCTT
TAGAGAGCGATACGTTTAAATATTTTTTTCCCGACCCACCCCATGTCTCT
GTATCTATTGATCAACGAGACAGCTGTGAAGGGGAAATTACAGAGAAAGA
ACTCAAAGAATCCATAGAGTCATTTTCATCTGGAAAAGCA Coding sequence (CDS) from alignment at Sc0000292:107597..108686+ >transcript:BL86708_cuf0 ID=transcript:BL86708_cuf0|Name=transcript:BL86708_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1089bp|location=Sequence derived from alignment at Sc0000292:107597..108686+ (Branchiostoma lanceolatum)
ATTTATGCCCCTAACTCTGATGACCCAGACTTCTTCTATAACCTTGAAAC
AACAATACACAATCACATAGCGTCAGATCTAAATACTATTATTGTTGGTG
ATTTTAATACTATATTGAACCCGGAGATTGACAGAGCTGGGCATCACGCT
GCAGTTTATCACCCTAAGTGTCGTACAGCAATTAATTCTTTATGCGCTAA
TTTAGATTTACATGATATTTATAGATATTATAACCCCAGAACAACACGTT
ATACTTGGAGACGGAGGTACCAGGCCAGTAGAATTGACTATTTTTTAACT
TCTTTTTCCTTAACTTCTGCTATAGGTAACGCTTGTGTAGAGGATAGTTT
AAGGTCGGACCATTCGCTCATTGGTCTCACTGTTACCACTTCTACTATAC
CTCGCGGACGTGGGTATTGGAGGCTGAACCAGGATTTGTTATACGATAAA
ACTTTTATAAAGGAAACCTCAGAATTCATAACAGATTTTTTCCATTTCAA
TGTTAATTCTGCTAGTCCACACGTTGTGTGGGAAGCTTTTAAATGTGCCA
TTCGCGGACATATTATTAAATTTTCTTCATGGAAAGCTAAACAAAATAAA
GATACTGTATTTTCTCTCTCTGGGGAGATCGACAAACTGCAAAAAGTATT
AGATACACATTTTAACTCAGACACCTTTCAAATATTACAAAATAAAAAAC
AGCAATTAGAATTACTATACCAAACTAAATCCAGTAACATGATCAGAGGG
GGGAGGGCCAAGTGGATGGAACACGGGGAAAAATGTACAAAACTCTTTTT
GAATCTTATAAATAGAGGAAACATGCGGAAGAATGTAACTAAACTCGTTA
CGGCTGAGGGATTGGTCATGACCGACCCTCAAGATATTTTAATCGAACAA
GTTAAGTTTTTTTCCGACCTTTATTCTTTCAAAGAATCTCCGATGTCTTT
AGAGAGCGATACGTTTAAATATTTTTTTCCCGACCCACCCCATGTCTCTG
TATCTATTGATCAACGAGACAGCTGTGAAGGGGAAATTACAGAGAAAGAA
CTCAAAGAATCCATAGAGTCATTTTCATCTGGAAAAGCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000292 | genome | Sc0000292:107597..108686 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86708_cuf0 |
| Biotype | protein_coding |
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