|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86551_cuf0 >transcript:BL86551_cuf0-protein ID=transcript:BL86551_cuf0-protein|Name=transcript:BL86551_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=99bp
MNNTTFPFVDNVTYGQYIVIGPPPNLKQSVPVTVVFVSCFSLIFLLSLAG
NLLVCLVVVKDRSLRNVTNYFVVNLAISDLLVTLLGMPLTLVSDILFGE Run BLAST on NCBI mRNA from alignment at xfSc0004419:50..1351+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86551_cuf0 ID=transcript:BL86551_cuf0|Name=transcript:BL86551_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1302bp|location=Sequence derived from alignment at xfSc0004419:50..1351+ (Branchiostoma lanceolatum)
CACATTTGAAATATGCGACGTAAGAGTGTTGAGTCGTGAGGATTTCTACT
GTAACGCTCGGCTGAAGTGCTCATAAAGCGTCAATGTGGCATGAGATTGA
GTACTAGGAATCTTACTTAAGGTGGAGTGTGAAAAACTCCTCCTTGATTG
ATACACGTGTAACGTTAGGAACGGGTCAAATATCTATCAGCCCCGGCTCG
AACATCAGTAGAGACGCAGACTGCATCCCAGAACTAGACAACTCTTCGCA
AGCAAACGGAAAAATAGCAGGGTGAGTGTTTTGAAGTGATTTCATTTTCA
TTCACTGATATGGTGTTAGTATTGGTAAAAATATAAAACCGCTGCTCTGG
TACCATGTAAAGTAAGTGTTTATGAAGAAATATGGTTTTGTTGAAATATC
TACCGATACTTTTTCTGAACGTTTTATCTAAAAGGACATAGTGTAAGTGA
CAATTTACGGAGCCCTCTTCATCGTCACTCATAACAATATTTCCTTTCTT
TGGACAGTTTAACTCAATGGAACATGTTTGAGTTAAGTATGTTTCTGTAT
GTATTAGTTTCGATGTGTTATCAACAAACATTTTCTGTTGCTCTTGTCAA
TACAGGGCCTCACATAGCGGTCAGCGAAGAGTCCACCACAATGAACAACA
CCACATTTCCCTTCGTCGACAACGTCACGTACGGCCAGTACATAGTTATA
GGTCCACCACCGAATCTAAAACAATCCGTCCCTGTAACCGTCGTATTCGT
CAGCTGTTTCTCTCTCATATTCCTGCTAAGTCTGGCCGGAAATTTATTGG
TTTGCCTGGTGGTTGTTAAAGACCGTAGTCTCAGAAACGTCACCAACTAT
TTTGTAGTCAACTTGGCCATTAGCGACCTGCTCGTCACCCTCCTCGGGAT
GCCTCTGACACTTGTGAGCGACATCCTGTTCGGTGAGTGATTGATGTTTC
TAGTAAATATCCTTTTGCATGTAAAAGCCTTTCATGTATATTGTGCATCG
CTGACGGCGTCTCTCGTCGTTGACGGACGAGTAGACAAATCTGATCACTT
CCTGTTTGTTCCACAGACTTTGCCACAAATGCAATACATAAAACCATTGC
TAAGCTACAAATTCTGTTTAGAACCGTCAAGGGTACGTGCTACATGTTAT
TAGATCGACCCGCAAGAAGAGTGGAATGGAGTGTATCGTAGAGTGGAACT
CGTTGCCACCAAGTACCCTCATTAGATCGCATTAAGCAACACTTATGGTT
AGATGTGCAAAGATCATTCGTAGCTCTGGGACAATGGCAGCGCTGAGACG
GC Coding sequence (CDS) from alignment at xfSc0004419:50..1351+ >transcript:BL86551_cuf0 ID=transcript:BL86551_cuf0|Name=transcript:BL86551_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=300bp|location=Sequence derived from alignment at xfSc0004419:50..1351+ (Branchiostoma lanceolatum)
ATGAACAACACCACATTTCCCTTCGTCGACAACGTCACGTACGGCCAGTA
CATAGTTATAGGTCCACCACCGAATCTAAAACAATCCGTCCCTGTAACCG
TCGTATTCGTCAGCTGTTTCTCTCTCATATTCCTGCTAAGTCTGGCCGGA
AATTTATTGGTTTGCCTGGTGGTTGTTAAAGACCGTAGTCTCAGAAACGT
CACCAACTATTTTGTAGTCAACTTGGCCATTAGCGACCTGCTCGTCACCC
TCCTCGGGATGCCTCTGACACTTGTGAGCGACATCCTGTTCGGTGAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0004419 | genome | xfSc0004419:50..1351 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86551_cuf0 |
| Biotype | protein_coding |
|
