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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86538_cuf0 >transcript:BL86538_cuf0-protein ID=transcript:BL86538_cuf0-protein|Name=transcript:BL86538_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=248bp
MPQQVLDFLIWDMMEGLHVTIDESTIAGRRVFVFGDVHGCYDELVKLLAR
ADETAPGNILYISVGDLINRGPMSAQVVSLVRNRGILSVRGNHEENFLKN
LAVMSKKMQLAQDFTEEDINFLQNLPYTITIPSLKAIIVHAGIIPGLPLA
NQDTYTLTCMRNVVETKSGGYRPYSETDQGVAWASVWLGPEHVYYGHDAR
RGRDGIQRHEFATGLDTRCVKGGQLSGVFLDGAKEVLSVPAKMTYFSG Run BLAST on NCBI mRNA from alignment at Sc0000013:1622859..1624716- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86538_cuf0 ID=transcript:BL86538_cuf0|Name=transcript:BL86538_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1858bp|location=Sequence derived from alignment at Sc0000013:1622859..1624716- (Branchiostoma lanceolatum)
GTCAACCAGTACTGCAGGGAACCCGGAAGTTATCAATGACAAAGGGGCGT
AACCATGTTAGGGTCAGTTCTAGATCTAGAATTGCAGAGATTACAATGAA
ATGCCTCAGCAGGTCTTAGACTTTCTCATTTGGGACATGATGGAGGGACT
GCACGTGACTATTGACGAGTCCACCATAGCGGGCAGGAGGGTGTTTGTGT
TTGGCGATGTGCATGGCTGCTATGATGAACTGGGTAAAGGCTAGGAGTTT
CACAAATTTTGTCACTTTTTAGTTCATATGTTGTCATGTTTCTTAAGATT
TGTAGACCTACATGAAATTTGATTTTACCTGGATAAGTAAAATTTACATA
TGGAAATTTAGTAACACTGTCTGATTATACTTCCATCCCAATTAAAGCAA
TTGTTGAAAAAGTTAGCATGTCTTTCAAAGTAGTCTTCTCAACTACTTTG
CCAAATTAGAATTATACAATATGCATTCCTTCTCTTTATTCTTGGGTACT
AGGAACTCAATCTCTGACGTCGACTTTGACTTTATGTTTAACCATTCTTT
ATCTTTAACTAGCATATGTTCTACTGTTAGTATATACATGTATTAGTGAT
GAGCAACTGATTCAACATCCCAGTAGTGTGTCAAGAGGTTAAATTTTTTT
TGTCACAGATGACCAAAAGTAATACATTTTTTTCCAGTTAAACTGCTTGC
AAGAGCTGATGAAACTGCACCAGGGAACATCCTATACATTTCTGTCGGTG
ATCTCATCAACCGTGGACCAATGAGTGCCCAGGTGGTCTCCCTCGTAAGG
AACCGCGGCATCTTATCCGTCCGTGGCAACCACGAGGAAAACTTTCTCAA
GAACCTGGCTGTGATGTCTAAGAAAATGCAGCTTGCTCAGGACTTTACAG
AAGAAGACATAAACTTTCTCCAAAACTTGCCATATACCATTACCATTCCT
TCACTGAAGGCTATCATTGTACACGCAGGCATTATACCAGGGCTGCCACT
TGCCAATCAGGATACATACACCCTTACTTGTATGAGAAATGTAGTGGAAA
CTAAGAGTGGTGGATACAGACCTTATAGTGAGACAGATCAAGGTGTAGCA
TGGGCTTCAGTGTGGCTTGGACCTGAACATGTTTACTATGGTCATGATGC
AAGGAGAGGGAGGGATGGAATACAGAGACATGAGTTTGCCACAGGGTTGG
ATACAAGATGTGTCAAGGGAGGACAGTTAAGTGGGGTTTTCTTAGATGGA
GCAAAGGAGGTGTTAAGTGTGCCAGCTAAGATGACTTACTTTAGTGGGTA
GTTTAATTTCTCTCATTGCACATTGTGTGGCCCAAGGGCTACTGAAATGG
AGATGGGCACCACCCTATGCACCTTCTGGTGTGGGAAGGTCCACTTTTGA
TCATAGCACATTTGGCATGTAACGTTACTGACTGTGACTAAATTAAAGTC
TTGAGGTAATTGGCTGAGCTGTTTAGATGTATCATAAAATTATTCAATGC
AGAATTCATCAAATAAAGGATAACCACACCTCTAAAGGCAATTCTTGACA
TAAAAAAATCAATAAGTTAATCTGAAGGCTTTATTTCATGTCTTTCTGCA
TTTTGTTTTGTTAATCGATAAATGTCAGTAGCCGATCATATAGTAATGAA
AATAGATAAATGATTTGCCTTATAATGGCAAATATTGTAAAAGAGGTATC
ATTTACTACCTGACATTATGAAGCTCTTTTGTTGGCTCAAAAAAGGGAAA
TATCCGTGCACATACTGTATCAATGTTTCTAGTTGTTTCAATCAAAGAAC
TGTCTATGGCATCATAATAACGTTAACGTTACAATAGAACTCAATAAAAG
TTTCTCAG Coding sequence (CDS) from alignment at Sc0000013:1622859..1624716- >transcript:BL86538_cuf0 ID=transcript:BL86538_cuf0|Name=transcript:BL86538_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1494bp|location=Sequence derived from alignment at Sc0000013:1622859..1624716- (Branchiostoma lanceolatum)
ATGCCTCAGCAGGTCTTAGACTTTCTCATTTGGGACATGATGGAGGGACT
GCACGTGACTATTGACGAGTCCACCATAGCGGGCAGGAGGGTGTTTGTGT
TTGGCGATGTGCATGGCTGCTATGATGAACTGGTTAAACTGCTTGCAAGA
GCTGATGAAACTGCACCAGGGAACATCCTATACATTTCTGTCGGTGATCT
CATCAACCGTGGACCAATGAGTGCCCAGGTGGTCTCCCTCGTAAGGAACC
GCGGCATCTTATCCGTCCGTGGCAACCACGAGGAAAACTTTCTCAAGAAC
CTGGCTGTGATGTCTAAGAAAATGCAGCTTGCTCAGGACTTTACAGAAGA
AGACATAAACTTTCTCCAAAACTTGCCATATACCATTACCATTCCTTCAC
TGAAGGCTATCATTGTACACGCAGGCATTATACCAGGGCTGCCACTTGCC
AATCAGGATACATACACCCTTACTTGTATGAGAAATGTAGTGGAAACTAA
GAGTGGTGGATACAGACCTTATAGTGAGACAGATCAAGGTGTAGCATGGG
CTTCAGTGTGGCTTGGACCTGAACATGTTTACTATGGTCATGATGCAAGG
AGAGGGAGGGATGGAATACAGAGACATGAGTTTGCCACAGGGTTGGATAC
AAGATGTGTCAAGGGAGGACAGTTAAGTGGGGTTTTCTTAGATGGAGCAA
AGGAGGTGTTAAGTGTGCCAGCTAAGATGACTTACTTTAGTGGGTAGATG
CCTCAGCAGGTCTTAGACTTTCTCATTTGGGACATGATGGAGGGACTGCA
CGTGACTATTGACGAGTCCACCATAGCGGGCAGGAGGGTGTTTGTGTTTG
GCGATGTGCATGGCTGCTATGATGAACTGGTTAAACTGCTTGCAAGAGCT
GATGAAACTGCACCAGGGAACATCCTATACATTTCTGTCGGTGATCTCAT
CAACCGTGGACCAATGAGTGCCCAGGTGGTCTCCCTCGTAAGGAACCGCG
GCATCTTATCCGTCCGTGGCAACCACGAGGAAAACTTTCTCAAGAACCTG
GCTGTGATGTCTAAGAAAATGCAGCTTGCTCAGGACTTTACAGAAGAAGA
CATAAACTTTCTCCAAAACTTGCCATATACCATTACCATTCCTTCACTGA
AGGCTATCATTGTACACGCAGGCATTATACCAGGGCTGCCACTTGCCAAT
CAGGATACATACACCCTTACTTGTATGAGAAATGTAGTGGAAACTAAGAG
TGGTGGATACAGACCTTATAGTGAGACAGATCAAGGTGTAGCATGGGCTT
CAGTGTGGCTTGGACCTGAACATGTTTACTATGGTCATGATGCAAGGAGA
GGGAGGGATGGAATACAGAGACATGAGTTTGCCACAGGGTTGGATACAAG
ATGTGTCAAGGGAGGACAGTTAAGTGGGGTTTTCTTAGATGGAGCAAAGG
AGGTGTTAAGTGTGCCAGCTAAGATGACTTACTTTAGTGGGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000013 | genome | Sc0000013:1622859..1624716 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86538_cuf0 |
| Biotype | protein_coding |
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