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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86456_cuf0 >transcript:BL86456_cuf0-protein ID=transcript:BL86456_cuf0-protein|Name=transcript:BL86456_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=248bp
MKCTVIRLGKGHPDFVYTMTDKEASTSLNFTQLEKDLGIMVDKDLNFSNH
VAAITNKANQVAGLMWRTFEFVDKKVFLLLYKSLIRPHLEYGAPVWSPYS
WKLAFELEQVQKRATKRVPGLRNMTYEERLRVLDLPTLVYRRIRGDLINT
YKFIHGVYDLESPFDLIEETRTRGHSLRIKRKTSKSNRRAHFFSVRVIPW
WNSLPETVVVSPSINCFKERLDRLMRKHKVYFDFRALDNPHKLEMTVT Run BLAST on NCBI mRNA from alignment at Sc0000083:1223844..1225353- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86456_cuf0 ID=transcript:BL86456_cuf0|Name=transcript:BL86456_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1510bp|location=Sequence derived from alignment at Sc0000083:1223844..1225353- (Branchiostoma lanceolatum)
AAATACATGCGATACCTTCAAAAGGGTCAAAAAGGCCGCGGACAAATTTA
ATCTGTAAGAGTTTACCTTACACCCTGTAAAATATCAAGACTCAAACTGC
TTTCCCCACCTGGGCTCGGGCACATAAAGTGAGCATGTCATTTTTTAACC
AAAATATCGATTTCTTTCCCCAAAAATCTGTCACATGAAAACTTTTGTAC
AGTCATTTTATTCAGACCAAGAAGCGCTAACAGTGTGTCAAATTTCTCGG
CGTTATGACCATGCAAACAATAATTATAACCATATATGTAAAATACCGGT
AATTACAGGGTGTCACATGCCGTAATTGACCTGAGTCGGTGCCAATCCAG
AGATTACTAGCAAAAGTACAAAGTTATGGAATAACGGGCAACATTCTGAA
GTGGATTAAGTCCTTCCTACAAGGGAGAAGACAGAGGGTACGGGTAAACG
GCACAAGATCGGACTGGGCAGCAGTAACTAGTGGCGTGCCTCAGGGAAGT
GTGCTGGGTCCGGTGCTGTTCTCCTTGTTTGTTAATGATCTACCTGAGAC
TGTGCAAAGTGACCTAAAGCTTTTCGCGGACGATACGAAAATTTACCGTC
CAGTAGCAAAGGTTAACGACTGTGCCGTCATACAGAAAGATCTACATCAA
CTACAAAGCTGGGCAGAAGATTGGCAGCTGAACTTTCACCCTATGAAATG
TACTGTCATTAGGTTGGGAAAGGGTCATCCTGACTTTGTATACACTATGA
CGGACAAAGAAGCAAGTACATCTTTGAACTTCACACAGTTAGAGAAAGAC
CTGGGTATTATGGTAGATAAGGACCTGAACTTCAGTAATCACGTAGCTGC
AATAACCAACAAAGCCAATCAAGTTGCAGGACTTATGTGGAGAACCTTTG
AATTTGTCGATAAAAAAGTATTCTTACTCTTGTACAAATCTCTAATCCGC
CCACACTTGGAATACGGGGCACCAGTGTGGTCACCATACTCGTGGAAACT
AGCTTTTGAGCTCGAACAGGTTCAAAAGAGGGCAACAAAACGTGTCCCTG
GCCTCAGGAATATGACGTATGAGGAGAGACTTAGAGTGTTGGACTTACCA
ACTCTAGTCTACAGACGTATTAGGGGAGACTTGATCAACACATACAAGTT
CATCCATGGAGTGTATGACTTGGAAAGCCCTTTCGACTTGATCGAGGAAA
CTAGAACTAGAGGACACAGTTTACGTATAAAGAGGAAAACATCTAAATCC
AACAGAAGAGCACACTTCTTCAGCGTCCGGGTGATCCCCTGGTGGAATAG
CCTACCCGAGACAGTAGTGGTTTCTCCCAGCATAAACTGTTTCAAGGAGA
GGCTGGACAGGCTCATGCGGAAACACAAGGTGTACTTTGACTTCCGAGCT
CTAGACAACCCCCACAAACTGGAAATGACTGTGACATAAAAGTGAAGAGC
GGCCTAAAATGGAACCAGCCGATTCCTACCTGGCCGAAGAAACTCTACTC
TACTCTACTC Coding sequence (CDS) from alignment at Sc0000083:1223844..1225353- >transcript:BL86456_cuf0 ID=transcript:BL86456_cuf0|Name=transcript:BL86456_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=747bp|location=Sequence derived from alignment at Sc0000083:1223844..1225353- (Branchiostoma lanceolatum)
ATGAAATGTACTGTCATTAGGTTGGGAAAGGGTCATCCTGACTTTGTATA
CACTATGACGGACAAAGAAGCAAGTACATCTTTGAACTTCACACAGTTAG
AGAAAGACCTGGGTATTATGGTAGATAAGGACCTGAACTTCAGTAATCAC
GTAGCTGCAATAACCAACAAAGCCAATCAAGTTGCAGGACTTATGTGGAG
AACCTTTGAATTTGTCGATAAAAAAGTATTCTTACTCTTGTACAAATCTC
TAATCCGCCCACACTTGGAATACGGGGCACCAGTGTGGTCACCATACTCG
TGGAAACTAGCTTTTGAGCTCGAACAGGTTCAAAAGAGGGCAACAAAACG
TGTCCCTGGCCTCAGGAATATGACGTATGAGGAGAGACTTAGAGTGTTGG
ACTTACCAACTCTAGTCTACAGACGTATTAGGGGAGACTTGATCAACACA
TACAAGTTCATCCATGGAGTGTATGACTTGGAAAGCCCTTTCGACTTGAT
CGAGGAAACTAGAACTAGAGGACACAGTTTACGTATAAAGAGGAAAACAT
CTAAATCCAACAGAAGAGCACACTTCTTCAGCGTCCGGGTGATCCCCTGG
TGGAATAGCCTACCCGAGACAGTAGTGGTTTCTCCCAGCATAAACTGTTT
CAAGGAGAGGCTGGACAGGCTCATGCGGAAACACAAGGTGTACTTTGACT
TCCGAGCTCTAGACAACCCCCACAAACTGGAAATGACTGTGACATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000083 | genome | Sc0000083:1223844..1225353 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86456_cuf0 |
| Biotype | protein_coding |
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