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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86315_cuf0 >transcript:BL86315_cuf0-protein ID=transcript:BL86315_cuf0-protein|Name=transcript:BL86315_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=351bp
IQVALDHYHVPTGVKGMISSYFEGVQLRFRTTDFTTQWQNLEKGIVTGCT
ISPILFIMGMNLLVEAAASKAKGPRMMSGARQNPLRGFMDDLTVTTVSHI
EARWMLEELDQMATWARMKFKPKKSRCMVIKKGKVTSRFKLEVQGEPIPS
IEGNPIKCLGKWYDDTLSDRKNVSSTMMQIEEWLRRIEKSGLPGKFKAWL
YQHGMLPRLVWLLTVYEIPLTSVELMERKVNKHLRKWLGVPPSFTSLGLY
SKSGQMQLPLASVVEEYKVAKCRTVMLYRPASSAGRSHHKGRPQVQGRLL
SLKGGRNVDPAGHSWDNEHWKAGSGFVTLPTMGKSEQERKKRPNSDRSKT
P Run BLAST on NCBI mRNA from alignment at Sc0000036:560556..562401- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86315_cuf0 ID=transcript:BL86315_cuf0|Name=transcript:BL86315_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1846bp|location=Sequence derived from alignment at Sc0000036:560556..562401- (Branchiostoma lanceolatum)
GATCCAGGTGGCATTGGATCACTACCACGTCCCTACAGGAGTCAAGGGTA
TGATCTCCAGTTACTTTGAAGGGGTCCAGCTACGTTTCAGAACTACGGAT
TTCACTACCCAGTGGCAGAATCTAGAGAAGGGAATCGTAACAGGATGCAC
AATATCCCCTATTCTGTTCATAATGGGGATGAACCTTTTGGTAGAGGCTG
CCGCAAGCAAAGCCAAGGGCCCACGAATGATGTCTGGAGCTAGGCAAAAC
CCACTGAGGGGATTTATGGACGACCTCACAGTAACTACCGTATCCCACAT
AGAGGCCAGATGGATGTTAGAGGAGCTTGACCAGATGGCAACATGGGCAA
GAATGAAGTTTAAACCGAAGAAATCCAGGTGCATGGTCATCAAGAAAGGG
AAAGTGACCAGTAGGTTCAAGCTGGAAGTGCAGGGAGAGCCCATCCCATC
AATCGAAGGAAATCCGATCAAGTGCCTAGGAAAGTGGTATGATGACACCC
TTTCAGATAGGAAGAATGTCAGTAGCACCATGATGCAGATAGAAGAATGG
TTGAGAAGAATTGAGAAGTCAGGCCTCCCAGGAAAATTCAAGGCCTGGCT
TTACCAGCATGGGATGTTACCTAGGTTGGTGTGGCTACTAACAGTATACG
AAATCCCACTGACAAGTGTAGAATTGATGGAAAGGAAAGTCAATAAGCAC
CTCAGAAAGTGGTTGGGCGTGCCACCAAGTTTTACTTCTCTGGGTCTGTA
TTCCAAATCAGGCCAGATGCAGCTCCCCCTCGCCTCAGTGGTAGAAGAAT
ACAAGGTGGCGAAATGCAGAACGGTTATGTTGTATAGACCAGCAAGTTCG
GCAGGCAGGAGTCATCACAAGGGCAGGCCGCAAGTTCAAGGCAGACTCCT
TAGTCTCAAAGGCGGAAGGAATGTTGATCCTGCGGGACATAGTTGGGATA
ACGAACACTGGAAGGCAGGGTCTGGGTTCGTCACACTTCCAACAATGGGG
AAAAGCGAGCAGGAAAGAAAGAAGAGGCCTAATTCAGACAGAAGTAAGAC
ACCTTGAGGAGGAAGGGCGGAGAGCCAAAGCAGCACAGTTAGCAGCACAG
GGTGCTTGGACTAAGTGGAACCTCCCCAGTAGGAAGATACCATGGTCAGA
GCTGTGGAAGCTGGAACCATTCCGTATTTCTTTCTTGTTGAGATCAGTCT
ACGACACATTACCTTCCCCAACCAACCTGTGCAGGTGGGGACTGAGGGAA
GACCCAGCATGCAAGCTTTGTGGTGAGAGGGGCACCATGGCCCACATCCT
GTCCGGGTGTAAAACAGCGCTCACACAGGGAAGATACCGGTGGCGACACG
ACAAAGTTCTGAGCACAATAGCAAGCATCTTAGAAGTTGAGAGGAAGAAG
AAGCGCAACGTAGTGACAAGAAGAGGCCCGGTGATCACATTCGTAAGAGA
GGGGGAAAAAAGTCGCCCGGCAACTGCAGCAAGAGCGGGCAACAGCATAC
TGCAAAAGGCGAAGTCATGGGACCTGAGAGTGGATTTGGGAAGAAGGCTG
CATTTCCCCCCAGTAGTTCATACGAGGCTGCGGCCAGACGCGGTGTTATG
GTCAGAAGAAGGAAAGAAAATCGTCCTGATAGAGTTAACAGTCCCATGGG
AGGAGAGATGTGAGGAAGCGTATGAGAGGAAGAAGAACAAATACCAAGAC
CTGCTACAAGATTGCAGGGATAAAGGATGGCAGGCTTGGCTGTTCCCAAT
AGAGATTGGGTGCAGAGGATTTCCAGCCCAGTCTGTGTGGAAGATGATGA
CAGCACTAGGAATAGCAGGGAAGGATAGGAAGACAGCTATTCGCAG Coding sequence (CDS) from alignment at Sc0000036:560556..562401- >transcript:BL86315_cuf0 ID=transcript:BL86315_cuf0|Name=transcript:BL86315_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1056bp|location=Sequence derived from alignment at Sc0000036:560556..562401- (Branchiostoma lanceolatum)
ATCCAGGTGGCATTGGATCACTACCACGTCCCTACAGGAGTCAAGGGTAT
GATCTCCAGTTACTTTGAAGGGGTCCAGCTACGTTTCAGAACTACGGATT
TCACTACCCAGTGGCAGAATCTAGAGAAGGGAATCGTAACAGGATGCACA
ATATCCCCTATTCTGTTCATAATGGGGATGAACCTTTTGGTAGAGGCTGC
CGCAAGCAAAGCCAAGGGCCCACGAATGATGTCTGGAGCTAGGCAAAACC
CACTGAGGGGATTTATGGACGACCTCACAGTAACTACCGTATCCCACATA
GAGGCCAGATGGATGTTAGAGGAGCTTGACCAGATGGCAACATGGGCAAG
AATGAAGTTTAAACCGAAGAAATCCAGGTGCATGGTCATCAAGAAAGGGA
AAGTGACCAGTAGGTTCAAGCTGGAAGTGCAGGGAGAGCCCATCCCATCA
ATCGAAGGAAATCCGATCAAGTGCCTAGGAAAGTGGTATGATGACACCCT
TTCAGATAGGAAGAATGTCAGTAGCACCATGATGCAGATAGAAGAATGGT
TGAGAAGAATTGAGAAGTCAGGCCTCCCAGGAAAATTCAAGGCCTGGCTT
TACCAGCATGGGATGTTACCTAGGTTGGTGTGGCTACTAACAGTATACGA
AATCCCACTGACAAGTGTAGAATTGATGGAAAGGAAAGTCAATAAGCACC
TCAGAAAGTGGTTGGGCGTGCCACCAAGTTTTACTTCTCTGGGTCTGTAT
TCCAAATCAGGCCAGATGCAGCTCCCCCTCGCCTCAGTGGTAGAAGAATA
CAAGGTGGCGAAATGCAGAACGGTTATGTTGTATAGACCAGCAAGTTCGG
CAGGCAGGAGTCATCACAAGGGCAGGCCGCAAGTTCAAGGCAGACTCCTT
AGTCTCAAAGGCGGAAGGAATGTTGATCCTGCGGGACATAGTTGGGATAA
CGAACACTGGAAGGCAGGGTCTGGGTTCGTCACACTTCCAACAATGGGGA
AAAGCGAGCAGGAAAGAAAGAAGAGGCCTAATTCAGACAGAAGTAAGACA
CCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000036 | genome | Sc0000036:560556..562401 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86315_cuf0 |
| Biotype | protein_coding |
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