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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86300_cuf0 >transcript:BL86300_cuf0-protein ID=transcript:BL86300_cuf0-protein|Name=transcript:BL86300_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=114bp
QYPAPSATPIHLDEVSCSSANVTKISACSHSRWGHYHPHCDHQRDVSVAC
TGQWYRCRDTEFTCSNTICVPPEVRCDFTNDCGDNSDEQGCGEYPGRCDF
QAGLCSWVQATSDN Run BLAST on NCBI mRNA from alignment at Sc0000056:1066560..1067442- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86300_cuf0 ID=transcript:BL86300_cuf0|Name=transcript:BL86300_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=883bp|location=Sequence derived from alignment at Sc0000056:1066560..1067442- (Branchiostoma lanceolatum)
GACAGTACCCCGCACCGTCCGCCACGCCCATCCACCTGGATGAAGTCTCG
TGCAGCTCAGCAAACGTGACGAAGATTTCGGCCTGTAGTCACAGTAGGTG
GGGCCACTACCACCCGCACTGTGATCACCAGAGGGACGTGTCGGTGGCAT
GTACGGGTGAGCATACTTCATTGACTTCTTTGTGTGTTGTCATCTTACCT
TACCTTTACCTAGCTAGTCCCATCCTCATGCCTGAGGGTCGGGGACTATG
GTAGCGTCCAGTACCAGCCTCCTCCACTCTCTCCTGTCATCTAGTGGCTG
AAAACTTGCCTTACTGCAGCAAAAATGTGTTGGCATTGAACATTCTTACA
TTTGAAAACATCTTGGCTTCAGTTGACATGCACACTTCTTTGGACTTGTT
CTCTCACAGGTCAGTGGTACAGATGCAGGGATACGGAATTTACCTGCTCC
AACACCATCTGTGTCCCTCCTGAAGTTCGCTGTGACTTCACCAACGACTG
TGGAGACAACAGTGATGAACAGGGCTGTGGTGAGTGATACAACATATGTA
TTTGCAGTTCGTAGATCAATGCCAGAAAGATAATTCAATATGAAAACTTA
TTCATCCAATTAATTGTTTTGATAGTTAGAAATTTTCATCTCCGACGCCA
TTGTTTGGTGTGGGGGGGATGTATGTTTGGCACAATGTACTCCAACATAA
TGTTGACCTTAAGATATGAGTTTATGTGCATTGACTGGCAGCTTGATTAC
CGCCACGCGGAGAATTAGAAAATGAAATGCACAAATCACCCTATTTCCCC
TCGTGTTGTGTAGGTGAGTACCCGGGAAGATGTGACTTTCAGGCCGGTCT
GTGCAGCTGGGTACAGGCGACATCCGACAACGC Coding sequence (CDS) from alignment at Sc0000056:1066560..1067442- >transcript:BL86300_cuf0 ID=transcript:BL86300_cuf0|Name=transcript:BL86300_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1026bp|location=Sequence derived from alignment at Sc0000056:1066560..1067442- (Branchiostoma lanceolatum)
CAGTACCCCGCACCGTCCGCCACGCCCATCCACCTGGATGAAGTCTCGTG
CAGCTCAGCAAACGTGACGAAGATTTCGGCCTGTAGTCACAGTAGGTGGG
GCCACTACCACCCGCACTGTGATCACCAGAGGGACGTGTCGGTGGCATGT
ACGGGTCAGTGGTACAGATGCAGGGATACGGAATTTACCTGCTCCAACAC
CATCTGTGTCCCTCCTGAAGTTCGCTGTGACTTCACCAACGACTGTGGAG
ACAACAGTGATGAACAGGGCTGTGGTGAGTACCCGGGAAGATGTGACTTT
CAGGCCGGTCTGTGCAGCTGGGTACAGGCGACATCCGACAACCAGTACCC
CGCACCGTCCGCCACGCCCATCCACCTGGATGAAGTCTCGTGCAGCTCAG
CAAACGTGACGAAGATTTCGGCCTGTAGTCACAGTAGGTGGGGCCACTAC
CACCCGCACTGTGATCACCAGAGGGACGTGTCGGTGGCATGTACGGGTCA
GTGGTACAGATGCAGGGATACGGAATTTACCTGCTCCAACACCATCTGTG
TCCCTCCTGAAGTTCGCTGTGACTTCACCAACGACTGTGGAGACAACAGT
GATGAACAGGGCTGTGGTGAGTACCCGGGAAGATGTGACTTTCAGGCCGG
TCTGTGCAGCTGGGTACAGGCGACATCCGACAACCAGTACCCCGCACCGT
CCGCCACGCCCATCCACCTGGATGAAGTCTCGTGCAGCTCAGCAAACGTG
ACGAAGATTTCGGCCTGTAGTCACAGTAGGTGGGGCCACTACCACCCGCA
CTGTGATCACCAGAGGGACGTGTCGGTGGCATGTACGGGTCAGTGGTACA
GATGCAGGGATACGGAATTTACCTGCTCCAACACCATCTGTGTCCCTCCT
GAAGTTCGCTGTGACTTCACCAACGACTGTGGAGACAACAGTGATGAACA
GGGCTGTGGTGAGTACCCGGGAAGATGTGACTTTCAGGCCGGTCTGTGCA
GCTGGGTACAGGCGACATCCGACAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000056 | genome | Sc0000056:1066560..1067442 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86300_cuf0 |
| Biotype | protein_coding |
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