|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86209_cuf0 >transcript:BL86209_cuf0-protein ID=transcript:BL86209_cuf0-protein|Name=transcript:BL86209_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=178bp
MLLTVMQIAGIYCSWRRRAPLLHAVAEFGITTCQGRIYVFGGEGEYVEFD
AVQCYGPTKNEWTYKMNLHKPLGDINACTVNSRMYLVGGKLECVLRFNHD
EDDMYLEALAERLDPWHYCSATVHGSEIFITGGQRGEPFVDWDPHTTPEE
ECDLLYCTNLATLQCYKTSNGTMTSEGD Run BLAST on NCBI mRNA from alignment at Sc0000811:25902..28127+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86209_cuf0 ID=transcript:BL86209_cuf0|Name=transcript:BL86209_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2226bp|location=Sequence derived from alignment at Sc0000811:25902..28127+ (Branchiostoma lanceolatum)
GCAAATAGCAAGAGTATGCGAAAATGGCTAATGCAATTATGCCATCTTAT
TTAGAATGGAGTGAATGTGAAATGGTTTGGGTTTTCAGAATTTTATGCAT
ATCCCCGAAGTATGCTATTAACAGTAATGCAAATAGCTGGAATCTACTGT
AGTTGGCGAAGGAGAGCACCGCTACTACACGCCGTGGCTGAATTCGGTAT
AACCACGTGTCAAGGAAGAATCTACGTATTTGGTGGTGAGGGTGAGTACG
TTGAGTTTGATGCTGTGCAGTGCTATGGCCCGACCAAAAATGAGTGGACT
TATAAAATGAACTTGCACAAGCCCTTGGGAGATATAAACGCATGCACAGT
CAACTCTAGGATGTATCTGGTTGGTGGGAAGTTAGAGTGTGTCCTGCGGT
TCAATCATGACGAAGACGACATGTATTTGGAGGCGTTGGCAGAGCGACTT
GACCCTTGGCATTACTGTAGTGCCACTGTGCATGGCTCGGAGATCTTCAT
CACAGGAGGCCAGCGAGGTGAGCCGTTCGTTGATTGGGATCCGCACACCA
CACCAGAAGAAGAATGTGATCTTCTTTACTGTACCAACTTGGCTACACTT
CAATGTTACAAGACAAGCAACGGTACCATGACTTCGGAAGGGGATTAGCC
ATTTAAACTAGCCAGACACTGTATAACCATAGCCAAAGACTAGTGTAGCT
CATCTTCTCTCTGTAAAGTTAAACTTGAGGTGCTGAATTGGTGGAGCACA
TATGTAATTGACAAATATATTGATACATGTACTTTGATAACACAGAAGTT
CCTCTTGTAGCCATGTTATGTGGTCATGCCCCCCAATGGACTGGGGTTTG
AATTAAATTAGGAAATGCATTTCTAATTGATGCTGAAATTTGCGTGTAAC
ACATGACTGGCTATCAGCTAGAAATCAAGTATTGCCCAAACCAAGTTAAG
TACATGTAATTATTTAACATATCTTAGAAATTCTTTTATTTTTCTTGGTA
TAAATGTAGACATTCCTACACCACAATGTACCGGTACTTTTGTGGTAAAA
AAATGCAATGAAGACTTTTATCAGAAGTATAGGTTTTCACTATATTGTAG
TAATTAGCACAATTGGTAACCATTTTTGAAGACAAGTTAAGCAAAGTAAT
TTAGATCTGTATAATAATGATAATGACATTTACTGTATATACTACATGTA
CATTGATTTTGTACTTTTATATCGCGATCGTTTGATTTTTGATAGCACTG
ACATTGATGGTAATTTTCTTTTTGTATGTATGCTCATTTACTAGTAGATT
ATGCATACCTGAAATAGTTTATGATGCAATATTTCTAGTATTTGAAGGTG
GAAGAAAAACCTCTATGCTATGAGCACATCTCTAGCCTGAGTGCCATCCT
GTTTCAGTTCCAGGCTCTACCTTGTGAAGATAGAGCCTGGAACTGATACA
GGAAGACACTCAGGCTAGCACATCTCATTTAGGTGTTCCCAAATACCCTG
AGCTCACCATGCTGAGCTAGCTCTTGTATGCCATTTCAAATTCTGCATTT
GAGTTTTGACTATTGGAAAATGTATTGAGCAATGTTAACAACACAGTGTC
TACTTGTTCCAGCTTGACCAGGTTGGTAGGACATATGCTTGTATAGAAAG
ATAAGCTGCTTATAACAATTGAGGAGTCACCAAAACATCAGCCAGGTACA
ATGTACATGGGTTGTGTTGCATTGTAATAACCTCATTTTCTAGTGTTGAT
AAACAATACTGCAGTGCATTATAATGACCATTCATCTTACTTATTGCACT
TACATTGTCTAAAATTGAAAGAGTTCAGAGACCTCATGGCTCCATGAGAC
ATTTTAGATATGTAAATGACTCACACATTTGCATAATCTATGTATGGTTA
TGTACGCCATCAGATGCGGCCAACTGTGCTCCTATAGCGGACTAACTCCT
CTGGCATGTTATCTGTCTATTCGGCCAATTTCTACCCTTTCCAGCTGCCT
CTGTGATAACCCTATATCATAGGCCTGAATAGAGACACTAATAACAGTTT
GGTATCAGTAGATCTTAACACACATCGTGAAGAAATATTACTTCGTATTC
GTGGCTTTTACAGTGAACACAGAGGGGCATTACATGAGGTAGCAATCACT
GTCATGAATGTTTAACTTATATATTGTTATTAATTGCCTTTATGGTTTAA
GTTCCTGACCAATGCCGATAGCTTAG Coding sequence (CDS) from alignment at Sc0000811:25902..28127+ >transcript:BL86209_cuf0 ID=transcript:BL86209_cuf0|Name=transcript:BL86209_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=537bp|location=Sequence derived from alignment at Sc0000811:25902..28127+ (Branchiostoma lanceolatum)
ATGCTATTAACAGTAATGCAAATAGCTGGAATCTACTGTAGTTGGCGAAG
GAGAGCACCGCTACTACACGCCGTGGCTGAATTCGGTATAACCACGTGTC
AAGGAAGAATCTACGTATTTGGTGGTGAGGGTGAGTACGTTGAGTTTGAT
GCTGTGCAGTGCTATGGCCCGACCAAAAATGAGTGGACTTATAAAATGAA
CTTGCACAAGCCCTTGGGAGATATAAACGCATGCACAGTCAACTCTAGGA
TGTATCTGGTTGGTGGGAAGTTAGAGTGTGTCCTGCGGTTCAATCATGAC
GAAGACGACATGTATTTGGAGGCGTTGGCAGAGCGACTTGACCCTTGGCA
TTACTGTAGTGCCACTGTGCATGGCTCGGAGATCTTCATCACAGGAGGCC
AGCGAGGTGAGCCGTTCGTTGATTGGGATCCGCACACCACACCAGAAGAA
GAATGTGATCTTCTTTACTGTACCAACTTGGCTACACTTCAATGTTACAA
GACAAGCAACGGTACCATGACTTCGGAAGGGGATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000811 | genome | Sc0000811:25902..28127 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86209_cuf0 |
| Biotype | protein_coding |
|
