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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86184_cuf0 >transcript:BL86184_cuf0-protein ID=transcript:BL86184_cuf0-protein|Name=transcript:BL86184_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=171bp
KIQKTNTLSFYLSFFSRYKNLRNQTMKEQFIRDVSVYGKSYIWMTPFAYK
MCTSYTFKAQQVLKELKSNNEIIFANPVFMGKMNGYWKKKGVKAWRASTG
LFLVSAALSMCEEVHLYGFWPWHLDRLGNNLTQHYYDNHPVHKAHKLPDE
FKQHQRLHNQGVLHMTTDNCA Run BLAST on NCBI mRNA from alignment at xfSc0002070:2..2368+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86184_cuf0 ID=transcript:BL86184_cuf0|Name=transcript:BL86184_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2367bp|location=Sequence derived from alignment at xfSc0002070:2..2368+ (Branchiostoma lanceolatum)
ACAAAATTCAAAAAACCAACACATTATCTTTCTATCTGTCATTCTTTTCC
AGGTACAAAAATCTAAGGAACCAAACAATGAAGGAACAGTTCATCAGAGA
TGTCTCTGTTTACGGGAAAAGTTATATTTGGATGACTCCATTTGCATACA
AGATGTGTACATCATACACCTTCAAAGCCCAGCAAGTACTGAAGGAACTT
AAATCTAACAATGAAATAATCTTTGCAAACCCAGTATTCATGGGCAAGAT
GAACGGGTACTGGAAAAAGAAGGGTGTCAAGGCATGGAGAGCATCTACAG
GTTTGTACTAATTTGTGTAAGAAAGTTTTCAACGATGTTTTGTTGACATT
ATAACATAACGCAAGATACCTGTAAGTTTTAACAAAGGCAAATTACACAT
AACCATGAATAAGAAAAAGAAAACAATGATACATAACATTCTTGGTGAAG
GTGGAAAAAACTTAGATCGACTACTGAAATCTATTCCTAAGGAAAAGGGA
AATTTGAAGGTTGCAAATACACGACACATAACTACGTATATATACCGTCT
TAGGAAAAGTCAAGGTAGATGATGAAGAGAATTTCACTATGATTCGCCTG
TATGTTATACAATTATGATAGAAATATACTTTTTAGATATACGAATAATG
CCGAAAAATATTCTATATGCGTTTTTTTGGTGTGACCCGTGCTTAATTCA
ATGAGTGTAAACATGTATTTACCTAAGCACAGGTAACAACAGATATTAAA
TACGTATTTACACACATTGCAATGGGCACAATAAAGGTCTCCATTCATTA
ATTAACTTTCTGATGTTCTGTTTCAGGTCTGTTTCTGGTCAGTGCAGCTC
TAAGTATGTGTGAGGAAGTACACCTGTATGGATTCTGGCCTTGGCACTTG
GATAGGCTTGGCAACAACCTCACCCAACATTATTATGACAACCACCCAGT
GCACAAGGCTCACAAACTTCCAGATGAATTCAAACAACACCAACGACTTC
ACAACCAGGGAGTCCTGCACATGACTACAGACAACTGTGCATGATGCTGC
CTGAGTTACTGACTCCTGGCTCCCAGAACAACCCTAGCAATATCCTGTCA
TCCCTGGCCGTGTTTTCTGTTCGCCGCTAGCAACGGACATAGAATTTTCG
ATCTAATATCTGAGAGATGAAATTAAAAACAGACTTCTCGTATTTCACAC
TCTTTTAATAGATGAGGGCTTTGAATAATTTACATAAGAACGTGCAGTTA
ACGTTGTAATTCATCAATATACTTGGACTTGTGTAACAATTTATATCTGT
ATGACTGCTATATGATGTTGAAAATGCCAGTGCCTGATACATTTCACTTC
TATTTGCTAGAATGCATTTGTTGGATCACTTCGGCCGAAATCTTTGTAAA
ATGGAAAGAAATATGAGAATCTCTACCTTCCGACTCTCATCTTTTCACGA
CCGTAACCGGAAACATTTCAAACGGATATTTTTTCCTTGGCCTAGTTACA
TTTCTAATTATGTAAATAAGGCCACTTATGCATAGACAAGAAAACTCTAA
ATCTAATAAATTCTGTGATAGCTCAAAACATAATACTGCAGTTAGTGTAA
CCTACAAAGACAGATGTCAAGGGATCATGAAAATAAACGGATGTCAAGCT
ATGGGACTGGGAAGTGAAGTAGAATACCAAAGTAAATCCCTGGCAGGCCC
TAATGTTGTGCCCTTGGAAAAGGCACTTAACACTCATTTGCTCACTCGAC
TTGGGCAAAAATGAATACCTAGTTTCGGTTAGGGGCGTCCTTTTGGAGAG
GCGTTTAGATGTATGTCACGTGTTTGAGGAGAGTCACTTATAGGTGCCCT
ACGCGATTTCAGGGGGTAAAACTGGAAGTATTCTGGATAAGGCAATCTGT
ATGAAATTGACATTTACTTCCTTATAGGGGTGGATATCGGTACAGAAAAT
TCAGGTCCAGTCCAGTTCCAGAGGGCCAGGTCCGGGTCCAGGTCTGGACC
TGAACCTAATTGTAGAAGTGCATCATATTTTGAAGAGCAAGACACAAGTA
CAGGTCTCTGTGAGTCTTACAAATAATGTTAAGATTGTATATTAGAATGA
TATGATAATTTCAGTGCACACTAATGTGCAGAAATGAAACGAAGATGTAA
AACAACATGCAACTTTTCATCCCAAGGTAACTTTTACCTTACACAAGAGA
TTCAGAGCAAACCTTTTCTTTCTTGGGATAAGATATAGTTGACAACTAGA
CATTATGATCAACAAATAGTCCTAGTTTTCAGCAGTTTAAAGTATTTGCT
AGTTTATCATGAAAAAAATAAAACAAAAATCTCCATGAAATGTGGTTTTA
TGTATGATGTGTTTTAT Coding sequence (CDS) from alignment at xfSc0002070:2..2368+ >transcript:BL86184_cuf0 ID=transcript:BL86184_cuf0|Name=transcript:BL86184_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1032bp|location=Sequence derived from alignment at xfSc0002070:2..2368+ (Branchiostoma lanceolatum)
AAAATTCAAAAAACCAACACATTATCTTTCTATCTGTCATTCTTTTCCAG
GTACAAAAATCTAAGGAACCAAACAATGAAGGAACAGTTCATCAGAGATG
TCTCTGTTTACGGGAAAAGTTATATTTGGATGACTCCATTTGCATACAAG
ATGTGTACATCATACACCTTCAAAGCCCAGCAAGTACTGAAGGAACTTAA
ATCTAACAATGAAATAATCTTTGCAAACCCAGTATTCATGGGCAAGATGA
ACGGGTACTGGAAAAAGAAGGGTGTCAAGGCATGGAGAGCATCTACAGGT
CTGTTTCTGGTCAGTGCAGCTCTAAGTATGTGTGAGGAAGTACACCTGTA
TGGATTCTGGCCTTGGCACTTGGATAGGCTTGGCAACAACCTCACCCAAC
ATTATTATGACAACCACCCAGTGCACAAGGCTCACAAACTTCCAGATGAA
TTCAAACAACACCAACGACTTCACAACCAGGGAGTCCTGCACATGACTAC
AGACAACTGTGCATGAAAAATTCAAAAAACCAACACATTATCTTTCTATC
TGTCATTCTTTTCCAGGTACAAAAATCTAAGGAACCAAACAATGAAGGAA
CAGTTCATCAGAGATGTCTCTGTTTACGGGAAAAGTTATATTTGGATGAC
TCCATTTGCATACAAGATGTGTACATCATACACCTTCAAAGCCCAGCAAG
TACTGAAGGAACTTAAATCTAACAATGAAATAATCTTTGCAAACCCAGTA
TTCATGGGCAAGATGAACGGGTACTGGAAAAAGAAGGGTGTCAAGGCATG
GAGAGCATCTACAGGTCTGTTTCTGGTCAGTGCAGCTCTAAGTATGTGTG
AGGAAGTACACCTGTATGGATTCTGGCCTTGGCACTTGGATAGGCTTGGC
AACAACCTCACCCAACATTATTATGACAACCACCCAGTGCACAAGGCTCA
CAAACTTCCAGATGAATTCAAACAACACCAACGACTTCACAACCAGGGAG
TCCTGCACATGACTACAGACAACTGTGCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0002070 | genome | xfSc0002070:2..2368 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86184_cuf0 |
| Biotype | protein_coding |
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