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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86115_cuf0 >transcript:BL86115_cuf0-protein ID=transcript:BL86115_cuf0-protein|Name=transcript:BL86115_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=450bp
IGSTFVVIELTVVSSEASCTVTGVRVDSVSTLAAILTWIGSALVVIDLTV
VSTVASCTDTGVRVDPISTIASILTWIGSALIDVDVTVVSTIASCTVTGV
RVDPVTTLAAILTWVGSALIDVDLTVVSTIASCTVAGVRVDPVSTLAAIL
TWIGSALVVIDLTVVSTVASCTDTGVRVDPISTIASILTWIGCALIDVDV
TIVSTVASFTVKGVRVDSVSTLAAILTWVGSALVVIDLTVVSTVASCTDT
GVRVDPISTIASILTWIGCALIDVDVTVVSTIASCTVTGVRVDPVTTLAA
ILTWVGSALIDVDLTVVSTIASCTVAGVRVDRVSTLAAIMTWIGSTFVVI
ELTVVSTEASCTVAGVRVDSVSTLASILTWIGSALIDVDLTIVSAKASRT
VACVGIDPISTIASILTWIGSTFIVIELTVVSSEASCTVTGVRVDPVTTL Run BLAST on NCBI mRNA from alignment at Sc0000351:192384..193734+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86115_cuf0 ID=transcript:BL86115_cuf0|Name=transcript:BL86115_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1351bp|location=Sequence derived from alignment at Sc0000351:192384..193734+ (Branchiostoma lanceolatum)
ATTGGAAGCACATTCGTTGTCATTGAGCTCACAGTTGTCTCCAGTGAAGC
CAGCTGCACAGTTACAGGTGTAAGAGTTGACTCCGTCTCGACATTGGCCG
CCATTTTGACATGGATTGGAAGCGCACTCGTTGTTATTGATCTCACAGTT
GTCTCCACTGTAGCCAGCTGCACAGACACAGGTGTAAGAGTTGACCCCAT
CTCGACAATTGCCTCCATTTTGACATGGATTGGAAGCGCACTCATTGATG
TTGACGTCACAGTTGTCTCCACTATAGCCAGCTGCACAGTTACAGGTGTA
AGAGTTGACCCCGTCACGACATTGGCCGCCATTTTGACATGGGTTGGAAG
CGCACTCATTGATGTTGACCTCACAGTAGTCTCCACTATAGCCAGCTGCA
CAGTCGCAGGTGTAAGAGTTGACCCCGTCTCGACATTGGCCGCCATTTTG
ACATGGATTGGAAGCGCACTCGTTGTTATTGATCTCACAGTTGTCTCCAC
TGTAGCCAGCTGCACAGACACAGGTGTAAGAGTTGACCCCATCTCGACAA
TTGCCTCCATTTTGACATGGATTGGATGCGCACTCATTGATGTTGACGTC
ACAATTGTCTCCACTGTAGCCAGCTTCACAGTTAAAGGTGTAAGAGTTGA
CTCCGTCTCGACATTGGCCGCCATTTTGACATGGGTTGGAAGCGCACTCG
TTGTTATTGACCTCACAGTTGTCTCCACTGTAGCCAGCTGCACAGACACA
GGTGTAAGAGTTGACCCCATCTCGACAATTGCCTCCATTTTGACATGGAT
TGGATGCGCACTCATTGATGTTGACGTCACAGTTGTCTCCACTATAGCCA
GCTGCACAGTTACAGGTGTAAGAGTTGACCCCGTCACGACATTGGCCGCC
ATTTTGACATGGGTTGGAAGCGCACTCATTGATGTTGACCTCACAGTAGT
CTCCACTATAGCCAGCTGCACAGTCGCAGGTGTAAGAGTTGACCGCGTCT
CGACATTGGCCGCCATTATGACATGGATTGGAAGCACATTCGTTGTCATT
GAGCTCACAGTTGTCTCCACTGAAGCCAGCTGCACAGTCGCAGGTGTACG
AGTTGACTCCGTCTCGACATTGGCCTCCATTTTGACATGGATTGGAAGCG
CACTCATTGATGTTGACCTCACAATTGTCTCCGCTAAAGCCAGCCGGACA
GTCGCATGTGTAGGAATTGACCCCATCTCGACAATTGCCTCCATTTTGAC
ATGGATTGGAAGCACATTCATTGTCATTGAGCTCACAGTTGTCTCCAGTG
AAGCCAGCTGCACAGTCACAGGTGTAAGAGTTGACCCCGTCACGACATTG
G Coding sequence (CDS) from alignment at Sc0000351:192384..193734+ >transcript:BL86115_cuf0 ID=transcript:BL86115_cuf0|Name=transcript:BL86115_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1350bp|location=Sequence derived from alignment at Sc0000351:192384..193734+ (Branchiostoma lanceolatum)
ATTGGAAGCACATTCGTTGTCATTGAGCTCACAGTTGTCTCCAGTGAAGC
CAGCTGCACAGTTACAGGTGTAAGAGTTGACTCCGTCTCGACATTGGCCG
CCATTTTGACATGGATTGGAAGCGCACTCGTTGTTATTGATCTCACAGTT
GTCTCCACTGTAGCCAGCTGCACAGACACAGGTGTAAGAGTTGACCCCAT
CTCGACAATTGCCTCCATTTTGACATGGATTGGAAGCGCACTCATTGATG
TTGACGTCACAGTTGTCTCCACTATAGCCAGCTGCACAGTTACAGGTGTA
AGAGTTGACCCCGTCACGACATTGGCCGCCATTTTGACATGGGTTGGAAG
CGCACTCATTGATGTTGACCTCACAGTAGTCTCCACTATAGCCAGCTGCA
CAGTCGCAGGTGTAAGAGTTGACCCCGTCTCGACATTGGCCGCCATTTTG
ACATGGATTGGAAGCGCACTCGTTGTTATTGATCTCACAGTTGTCTCCAC
TGTAGCCAGCTGCACAGACACAGGTGTAAGAGTTGACCCCATCTCGACAA
TTGCCTCCATTTTGACATGGATTGGATGCGCACTCATTGATGTTGACGTC
ACAATTGTCTCCACTGTAGCCAGCTTCACAGTTAAAGGTGTAAGAGTTGA
CTCCGTCTCGACATTGGCCGCCATTTTGACATGGGTTGGAAGCGCACTCG
TTGTTATTGACCTCACAGTTGTCTCCACTGTAGCCAGCTGCACAGACACA
GGTGTAAGAGTTGACCCCATCTCGACAATTGCCTCCATTTTGACATGGAT
TGGATGCGCACTCATTGATGTTGACGTCACAGTTGTCTCCACTATAGCCA
GCTGCACAGTTACAGGTGTAAGAGTTGACCCCGTCACGACATTGGCCGCC
ATTTTGACATGGGTTGGAAGCGCACTCATTGATGTTGACCTCACAGTAGT
CTCCACTATAGCCAGCTGCACAGTCGCAGGTGTAAGAGTTGACCGCGTCT
CGACATTGGCCGCCATTATGACATGGATTGGAAGCACATTCGTTGTCATT
GAGCTCACAGTTGTCTCCACTGAAGCCAGCTGCACAGTCGCAGGTGTACG
AGTTGACTCCGTCTCGACATTGGCCTCCATTTTGACATGGATTGGAAGCG
CACTCATTGATGTTGACCTCACAATTGTCTCCGCTAAAGCCAGCCGGACA
GTCGCATGTGTAGGAATTGACCCCATCTCGACAATTGCCTCCATTTTGAC
ATGGATTGGAAGCACATTCATTGTCATTGAGCTCACAGTTGTCTCCAGTG
AAGCCAGCTGCACAGTCACAGGTGTAAGAGTTGACCCCGTCACGACATTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000351 | genome | Sc0000351:192384..193734 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86115_cuf0 |
| Biotype | protein_coding |
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