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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85933_cuf0 >transcript:BL85933_cuf0-protein ID=transcript:BL85933_cuf0-protein|Name=transcript:BL85933_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=118bp
MTKAIPNCTTNMTKAIPNCTTNMTKAIPNCTTNMTMAIPNCTTKMTKAIS
NCTTNMTKAIPNCTTKKTKAIANCTTNTTMAIYNCTNQHDRSNSQLHNLL
DKGNLQLQNVNQHDKGNL Run BLAST on NCBI mRNA from alignment at Sc0000091:458920..461187- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85933_cuf0 ID=transcript:BL85933_cuf0|Name=transcript:BL85933_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2268bp|location=Sequence derived from alignment at Sc0000091:458920..461187- (Branchiostoma lanceolatum)
NATGACAAAGGCAATTCCCAATTGCACAACCAACATGACAAAGGCAATTC
CCAATTGCACAACCAACATGACAAAGGCAATTCCCAATTGCACAACCAAC
ATGACAATGGCAATTCCCAATTGCACAACCAAGATGACAAAAGCAATTTC
CAATTGCACAACCAACATGACAAAGGCAATTCCAAATTGCACAACCAAGA
AGACAAAAGCAATTGCCAATTGTACAACCAACACGACAATGGCAATCTAC
AATTGCACTAACCAACATGACAGAAGCAATTCACAATTGCACAACCTACT
TGACAAAGGCAATTTACAATTGCAAAACGTTAACCAACACGACAAAGGCA
ATTTGTAATTTCACAAACAAGATGACAATGGCAATTACCAATTGTAAAAC
CAAAATGACAAAGGCAATTCCCAATTGCACTAACCAAGATGTCAAAAGCG
ATTCCCAATTGCACAATCAACATGAAAAAGGAAGCTCCCAAAGAGTATAT
TATGAGCAAGTGTATGTAGTGACTACCAGCTACTTGGCGAAAGAAACATT
TATTGTCACATCTATTATTAGATGTTTTGTCTTGTTTGAATCTGCATGCG
CATATATTTAAGCGTTTAGAATATTTCAATGAATTTTTGTGTGTTTTAAG
TGATATTTTGATTTTATACAGTCAAACCTGGTCGGTCAACCGCCTGGCGT
GGCCAACTGCCTCCAGTCATAAACCACATCTAAGCAGTCCCATCTAATTT
CACAAAGCTAAGACCCTCTGTTATAAACCAACCGTCTTACCCAACAAGCA
ATCACTTTCGGGGCACTCATTCCCCAACCAACACCCAAAATTGATGACAA
TTAATATTGCACCATACACAAGTCAAAATCATTGAAGCACATTGATATTT
CACAAACGTACAAAATAGAGCCAGTGGGACCTTACAAAGAAAAATTGAAA
GCACTTTGCTTTATACACAAACAACCCACCCAAATATCACATTCGATTTT
TAGACAAACACGGCTCTGATGGTCAAACAACGGTTCATTGAAATCCATTT
ATATAACAAAATGTTTATAAACAAAAGTTTATAAACCGTGGACAACTCTT
GTAGATACACACTAGATTCCAACTAATTGCATTACGGCCAATCGCTTATT
TCGGGGATCTGCCTAAAATTCTGAAAACCCAAACCATTTCCCATTCACTC
CATTATAAATGGAATGGCATAATTGCATTAGCCATTTTCGCATATTCGTT
CCATTTTCATGAAATAATACAACTATGTGACAACTGGAAAAGCAGTTTTT
AAGCACAAGTTTATAAGCTGTGGACACCTCTCGTAGATATACATGTATCT
CCTTGGAACTAAGGTGCAAATTGTACAAAATTTAATGCATTTTGTTTTCG
GCCAATTAATCCATTTGTCTGGAGCATCTACTCCCCCTCACCAACCATTA
TCTTCAGTCCCTTGAGTGGTTATTGAGGCCAGGTTTGACTGTACATCGTT
TTAGTTAAACATACACATGCTTCTGGGTTACACATTGAACGAGCTAAAAC
TTGTGAACTAGTTAAACTATGATAACACGTGGTGAATCATTGAAAGGAAA
GTATCTGCTTTGGTGAACGTGAAAAAGCGAGGCAAGATGTCGGGCCGAAA
CACAAAACACAACAAACAAACAAACAAACAAACATGCAAAGAAACATTAA
AAATTTCCAAGAGTTCTGTAACATATGTTGCACAACAAAAAAGACTTATT
GAACATACACTTGCGTTTACGAAGATTGTTATCATTGCTTTAATGTTATG
TATATAGATAACACCTATTTACCTGTTTGATCAATTGGTCCATAAGATTG
TAAAAAATCAACAGCCAGATAACAATGTGTGTTTTTCTAAGACTCTCTAA
GATGAAACATCTACTTTTCGGCAGAATTGTTGATACAATCAATAAAATGT
GTTTACTATTATGGAGAATTTGAGACATGCACGTGTAAATTTCCCAGAGC
TTGTAAGAAAATCAAAGTCAAATTAATAATTCTAAATATGCAATAATTAA
GCTGTTGAATATCACAGCACTTCTGTTCGAGCGTAGATGATTATCTCAGA
GTTCCTATCATATCATATACGAATAGAAATTATAAAATTACCAATCCTGT
TCCTCTTGCATACTACCCTTCGATTGCTACTGGGGTGACGCTACAGTTCT
AGTGTATGGCAGTGATGCATGCAATCCTATAAGGAGGAGGACAAAAAATG
TGTCATATTGCATTATTT Coding sequence (CDS) from alignment at Sc0000091:458920..461187- >transcript:BL85933_cuf0 ID=transcript:BL85933_cuf0|Name=transcript:BL85933_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=357bp|location=Sequence derived from alignment at Sc0000091:458920..461187- (Branchiostoma lanceolatum)
ATGACAAAGGCAATTCCCAATTGCACAACCAACATGACAAAGGCAATTCC
CAATTGCACAACCAACATGACAAAGGCAATTCCCAATTGCACAACCAACA
TGACAATGGCAATTCCCAATTGCACAACCAAGATGACAAAAGCAATTTCC
AATTGCACAACCAACATGACAAAGGCAATTCCAAATTGCACAACCAAGAA
GACAAAAGCAATTGCCAATTGTACAACCAACACGACAATGGCAATCTACA
ATTGCACTAACCAACATGACAGAAGCAATTCACAATTGCACAACCTACTT
GACAAAGGCAATTTACAATTGCAAAACGTTAACCAACACGACAAAGGCAA
TTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000091 | genome | Sc0000091:458920..461187 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85933_cuf0 |
| Biotype | protein_coding |
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