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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85924_cuf0 >transcript:BL85924_cuf0-protein ID=transcript:BL85924_cuf0-protein|Name=transcript:BL85924_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=302bp
TLHTPSCLQNDLDELNSWTSNNHMLLNGTKCLAMHITFCRNQPPFPTLQI
NSSTLSAVPCLKILGHRIQKDLRWNEQVRYMSAQAARKLFILKRLRKFNL
SPKELLTIYTGYIRPLLXSTLSAVPCLKILGLRIQKDLRWNEQVRYMSAQ
AARKLFILKRLRKFNLSPKELLTIYTGYIRPLLEYAVPIWNPGLTHRQMD
QLERIQRRACRIILGRDYPGYAEALTQLGLTTLSERRERLCLKFGRSLLG
SQFEHWLPSRRSEISGRCTRNGHKLNIPRANTLRFSDSPIPYLTKLLNQY
GY Run BLAST on NCBI mRNA from alignment at Sc0000218:136221..137331- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85924_cuf0 ID=transcript:BL85924_cuf0|Name=transcript:BL85924_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1111bp|location=Sequence derived from alignment at Sc0000218:136221..137331- (Branchiostoma lanceolatum)
AACTCTCCATACCCCCTCCTGTCTGCAAAATGACCTAGACGAGCTAAATT
CTTGGACAAGTAATAACCACATGCTTTTAAATGGTACCAAGTGTCTAGCA
ATGCACATTACGTTCTGCAGGAACCAGCCACCGTTCCCTACATTACAAAT
CAACTCCTCAACTCTGTCTGCTGTACCTTGTTTGAAAATACTTGGTCACC
GCATTCAGAAAGACCTACGTTGGAATGAACAAGTCAGATACATGTCAGCA
CAAGCCGCGAGAAAACTGTTCATTCTCAAGCGACTCAGAAAGTTCAACCT
TTCACCTAAAGAACTACTTACCATCTATACAGGGTACATAAGACCCCTTC
TCGNCTCAACTCTGTCTGCTGTACCTTGTTTGAAAATACTTGGTCTCCGC
ATTCAGAAAGACCTTCGTTGGAATGAACAAGTCAGATACATGTCAGCACA
AGCCGCGAGAAAACTGTTCATTCTCAAGCGACTCAGAAAGTTCAACCTTT
CACCGAAAGAACTACTTACCATCTATACAGGGTACATTAGACCCCTCCTC
GAATACGCCGTCCCCATTTGGAATCCCGGACTGACACATCGCCAAATGGA
CCAGCTGGAGAGAATTCAAAGAAGAGCCTGCCGCATCATCCTCGGCAGAG
ACTACCCTGGATATGCGGAGGCACTGACTCAGCTGGGTCTCACCACCCTG
TCGGAAAGGCGCGAGAGACTTTGTTTGAAGTTTGGCAGATCCCTGCTAGG
TTCCCAATTTGAACACTGGCTACCGAGTAGAAGATCCGAAATCTCGGGTA
GATGCACACGTAATGGGCACAAACTGAACATTCCTAGGGCAAATACACTG
AGATTCAGTGACTCACCGATACCGTACCTCACGAAACTGCTTAACCAGTA
TGGTTACTGAATCTCGGTGTGTTTGCCTTGGGAGTGTTCAGTTCAGTAAC
CAGTTACTAGTAACGTTATATTTTTCTGCACCATATTTGCGAATGATTTG
CGAATGTTGCTAATTTTGTTGGAGAAACAATATTGTCTAGAAAGTGTTTT
ATGTACCGGATTTTATATATGAACATGATTATATGTACGCCGACAGCAGT
TTAAAATTGTG Coding sequence (CDS) from alignment at Sc0000218:136221..137331- >transcript:BL85924_cuf0 ID=transcript:BL85924_cuf0|Name=transcript:BL85924_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=909bp|location=Sequence derived from alignment at Sc0000218:136221..137331- (Branchiostoma lanceolatum)
ACTCTCCATACCCCCTCCTGTCTGCAAAATGACCTAGACGAGCTAAATTC
TTGGACAAGTAATAACCACATGCTTTTAAATGGTACCAAGTGTCTAGCAA
TGCACATTACGTTCTGCAGGAACCAGCCACCGTTCCCTACATTACAAATC
AACTCCTCAACTCTGTCTGCTGTACCTTGTTTGAAAATACTTGGTCACCG
CATTCAGAAAGACCTACGTTGGAATGAACAAGTCAGATACATGTCAGCAC
AAGCCGCGAGAAAACTGTTCATTCTCAAGCGACTCAGAAAGTTCAACCTT
TCACCTAAAGAACTACTTACCATCTATACAGGGTACATAAGACCCCTTCT
CGNCTCAACTCTGTCTGCTGTACCTTGTTTGAAAATACTTGGTCTCCGCA
TTCAGAAAGACCTTCGTTGGAATGAACAAGTCAGATACATGTCAGCACAA
GCCGCGAGAAAACTGTTCATTCTCAAGCGACTCAGAAAGTTCAACCTTTC
ACCGAAAGAACTACTTACCATCTATACAGGGTACATTAGACCCCTCCTCG
AATACGCCGTCCCCATTTGGAATCCCGGACTGACACATCGCCAAATGGAC
CAGCTGGAGAGAATTCAAAGAAGAGCCTGCCGCATCATCCTCGGCAGAGA
CTACCCTGGATATGCGGAGGCACTGACTCAGCTGGGTCTCACCACCCTGT
CGGAAAGGCGCGAGAGACTTTGTTTGAAGTTTGGCAGATCCCTGCTAGGT
TCCCAATTTGAACACTGGCTACCGAGTAGAAGATCCGAAATCTCGGGTAG
ATGCACACGTAATGGGCACAAACTGAACATTCCTAGGGCAAATACACTGA
GATTCAGTGACTCACCGATACCGTACCTCACGAAACTGCTTAACCAGTAT
GGTTACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000218 | genome | Sc0000218:136221..137331 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85924_cuf0 |
| Biotype | protein_coding |
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