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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85721_cuf0 >transcript:BL85721_cuf0-protein ID=transcript:BL85721_cuf0-protein|Name=transcript:BL85721_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=208bp
MNDKERELCAAAEHGFIERLQQLLDGGTNPDASGINLATPLHWVAGNGHT
GAVQLLVTFGADPNKMDWQGFVPLHYAAHNDYTEVVQTLLIAGADPDTRD
SSGITPVHSASYSGHARTVHALIQGGANPNEQDMQGNTALHNAATYGHSD
CVKELLAAGADRTIRNKGGKTPEEVVGDPLGCREPVSLEDRKAVLKAFRE
CQGKTEMW Run BLAST on NCBI mRNA from alignment at Sc0000138:770830..784476- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85721_cuf0 ID=transcript:BL85721_cuf0|Name=transcript:BL85721_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=13647bp|location=Sequence derived from alignment at Sc0000138:770830..784476- (Branchiostoma lanceolatum)
GTATAGATTTAGGCGGGATCCCAATGAGTAAGGACCAGCTGCGGTTTTCT
TACCAGGTTAGTTTCTTGTCCTCGACTCTGTCTTTCTACGCGTTATACCT
CTCCAAGGTTTTCAATGCTTACCCTGTCGTATGTGGACACACTACCTGGG
CTAGTGTTCTTATTGTTTAGTACCGGCTGATACAGGCCAATGAATATAGA
TGATGATGAATGTATTTTATGTGAAGTTGATGATGATGTGAAGTTGGCAG
AAAAAGTTCAAGAATTGTGATATGACGTGAGATAGTTGTTAAAGCATAGG
AAATAATTGTTGCAAAATTTGAATCCTGAAGTGGGGATATTAAACAGCCA
TCTTTGTCATTCATATCATATGTTCTAACACAATGTATTGTCAAATTATG
CCCCCTAAAGTCCCAAAACTTTTCTGGGGCGTTAGAATCCAAATCGAGTT
CTATGTTGCGTACTTCAACTTAGGGTCACTCGCGGTCATTTGCAGGTTTC
TACTCAATAAATCCACGGCATCTCGGCCCGTTTTTCCTATGTGCCTTGCG
TCAGAAAGCATATATATATATATATATATCATAGATATGAACCATTTCTG
TGCTGACGTTTTGCTATAAGTAAGTGTAACATGTGACGAAGCTACTGGCT
TCAGTGTCAATGACCTCGGATATTTCAAGGCCTGTTTACGCCGGCACTAA
TCCCTCCCCTTTTCACGCGACACAAAGGATCACAAAGCGTTCCCTATTTA
TTTATTTCCTAGATCGTGTAGATTACAGCGACGTTAGCTGCAAAGGTGTA
GAACTCAAATCGGCGGACAGCCATGAACGACAAGGAAAGGGTTAGTTTTT
TTTTTAATCATCATCCATCATCCCCATGAAAAATAATGGAAATACTGTTT
ACGGCGAGTCTGTGTGTTTATCTGTGTGTGTGAGTGTCTGTCTGTTTGTG
TTTCCGGATATTTTACAGTCAGCATAACTCGAGACACCCTGGATTGATTA
TGATGCTATTTCTAGACACGCAACTACCGATTTGAAAGCTAATTCGGCTG
TAAGGAAGACATTTTCATGTTGAAAATTAAGATACAACTAGAGTCCCACG
AATACATTATCTTCGCCAAATAATCAAGGCTTATTATGGAGAGTGATTAG
TATTTACATGCTTATCACCCCCTGCAACATTGATCATATATCATATCATT
TGGAAGTTATGATGGGGGGATGAGTACAGTCTAGATAGGGTTAAAATCAT
TTGGTGGTACAGGACTAGTATATATGTCTAGTGTGCTGATACATGTTACA
ACTGGTCATGAAAAAAAATTGAACGTGATGATGAAATAGTACAGTCAATA
TATATGAATAGAATAAATCTTTATTCCATATCATACACATTTTGAAGGAC
ATAGTAGATGTGATTTTTCCATACCTAGCAGTGTTGCAGTTTTTGAGCAG
TGTACTCTCCAAGGAGAGGAGTGGGTCCGGCTGGTTTTTGACGTGTTTTT
TAATGTTTTTGTCAGGCTTTCTATTTTGCCTAAACTGAACACGTCAAAAA
CCAACCGGACCCACACCTCTGCTTGGAGTGTAGTGAGTGTCCCATCTGTT
TATTTAAATGTCCCATCTGTTTATTTATACTTTAAGCAAGGCCCTCTGTT
TATCTGTTTTCGGGAATACTGTCACATGTAACATTTTGAAATGCAGTGGA
TTTACTTTCCTTACTAATTGTGTAAATTAGCTCCTGATTTGCATAATTAG
TCATTGATTACGTAAAGCACAATCTGAGCTCCCTACATACCAAACATCAC
GACGATCTGTCGACCCCTTCTCAAGTTATCCATGTCCGAAGGTCAAAACA
AAACACCCACTGCAGTTCCAAACAAGCCGCTAGGGGGCCCAAACTTGCAC
AACTTACTTCCTGTGGCATGGACTATTTACCACACAAAAATCATGACCAT
AGCACTTTCTGAAAATATGCCCCCAAGTTTTGAAGCTCCGCTGCAGTATC
TTAGCTACCCGCTATAAGGCCCATTATCGAACTTGACCTTCCTTTCTGTA
AACCCAACCCATCCACGAGATATCATACAGAACCATCAACAGCTTCTACA
GTTATGCTGGCGACATACATTGAAATACACATCCACACAAAGCCCGCTGC
AGCACCGACGGAAAATGCCAGGGAAACCATTTTTGAACTTGACCTCCATT
TCTACAACGTACACGTACAAAAAATCATGAAGATCTATCAACGTTTTCGT
CACTTTTTTTGCCTACATACAAACGCGCCAAAATTAAAAGTCCACTGCAG
TACTGTTGAAAAACGCAAAGTAAACCATTTTCGAACTTGACCTTGCTTTG
CACAACCACTTCACCTACCAAAAATCATAAAGGTTCATTGAAGCTTTCTT
GAGTTATGCTCTTGACATACATACAGACCCACCCAGCAGATGTCTCAACC
GAAAACATAATCTTCTCCGAGTACTAGTACTCGGCGAAAACATTTAACGT
TAACGTACATACAACTTTGTCAGTTTTTTTGTAACGATCTCGCTCAATGC
AAGGCCGCAAGAGGCCACTTCTCGGCATTGAAATAATTGAACTAATGTGG
CATAGGTGAGAGACAGCAGTGTTTTTTTTAAGGTTTGTAGGTTGTATTCG
GGGGGGGAAAGCAGTGGGCTGGGAGGGAATTCCAGAGTTTTGCAGTTCGT
GGAAAAAAGCTGTTACTGTCAAATGACTTAGAGGCTGGTAGTTGTACAGT
ATAGTGCTGTGAATCAGAGGAGAATCTGGTAGTACGCTGAAACATTCTCT
GTGGTGGGACAAGTAGTGCAAGTTCATCAGAACACTGGCCGTGGAAGTAT
CTATAAAATAGAGACAGGGCGGCAATGTTTCGTCTGTGAGGAAGGGAGTC
TAGTTTTGAAGCCAAACGATGACCGATGACCAGACTAATTCTCCGTTGGA
TGCGGTCTAAAAGGTTCAAGCAATCCTTTGGAGCTCCAGCCCAGAGATGT
GAACAGTATTCCATGAAGGGACGAATGGTGGATTTGTACAGGTTTAGTAT
GCTCTCGGGAGTAAGATAGTGACTGGCTCTGAGAAGCGAACCAACTTTCA
TTGCTACGGATTTGGCGATGGACAGGGCCTTGGAAGTAATAAGACCAAGA
AGTCTGAAGTAGTCACTCTCTTGTAGTTCATTCCATTCTTAGATATCGGT
GGAAGAAAGGGTTCTCGATATCTATTAATGGAAAGGAGCTTCGTCTTTAA
GGAGTTAAACGTCACTAGCCATTTGTCACCCCAGTCTGCAACCGAGCCTA
AATCACGTTCTAAATTAGCTGCCATTTCTGTCCTGTCTAATTTGGATGAT
GGCCCGTTAGAACAGGAGTTCAGAGTAGAGTCATCAGCATAGATTGCAAG
TTGACAAAGAATGTGGTCAGGTTCAATGATGAACATAAGGAAGAGGGTTG
GGGCGAGAACAGAACCCTGGGGTACACCGGCATTGATTGAATAGAGTGAG
GATGACTGACCATCTAGAACGACTTTCAGCTTTCTGTCAGACAGAAAAGA
TGAAATTATGTTGACCATAGCACCCCCAATGCCATAGGCAACAAGCTTTG
TGACCTGCCCAGTGTGCCAGACTTTATCGAAAGCCTTAGAGATGTCGAGA
GCGACTATCGATCCGTGATTCCCCACGAGCATTGAGAGCCCGATTGACTC
TCTCTGTAATAACAATGAGAAGATTGGCTGTGAATCTCCCGGCTCGGAAT
CCATATTGGGAATCAGAAAGGAGCCCGAATGACTCAAGGTGTTTGAATAG
TTCTAGGTTCAGCAAAGTTTCAAAAACTTTGCTGAAGATCGGTACAATAC
TTATAGGCCTATACTTTGCTGGGATAGATCTTTCGCCGGCGTTCTTGTAG
ACAGGAATTATCGATGGGAATTTCCAAATCGATGGAAAGGAATTTCCGAT
ATAACTTAGCAAGAATAGGTAACAATTCCGGTGAGCACTTCTGAAGAACG
ATGACAGGGATGCCGTCAGGTCCAGTGGCTTTAGATGGATTGAGACTAGC
AATGATTGTGGCCACTCTGGAGGTAGTAATTGTACACTTTCAAGATGACG
GTCAGTTCTAGAAGGGAATTCGGGAGGCGAATGACCAGAGTCGTCAAGAG
TTGAATTCTTANTTGGATGATGGCCCGTTAGAACAGGAGTTCAGAGTAGA
GTCATCAGCATAGATTGCAAGTTGACAAAGAATGTGGTCAGGTTCAATGA
TGAACATAAGGAAGAGGGTTGGGGCGAGAACAGAACCCTGGGGTACACCG
GCATTGATTGAATAGAGTGAGGATGACTGACCATCTAGAACGACTTTCAG
CTTTCTGTCAGACAGAAAAGATGAAATTATGTTGACCATAGCACCCCCAA
TGCCATAGGCAACAAGCTTTGTGACCTGCCCAGTGTGCCAGACTTTATCG
AAAGCCTTAGAGATGTCGAGAGCGACTATCGATCCGTGATTCCCCACGAG
CATTGAGAGCCCGATTGACTCTCTCTGTAATAACAATGAGAAGATCGGCT
GTGGATCTCCCGGCTCGGAATCCATATTGGGAATCAGAAAGGAGCCCGAA
TGACTCAAGGTGTTTGAATAGTTCTAGGTTCAGCAAAGTTTCAAAAACTT
TGCTGATGATCGGTACAATACTTATAGGCCTATACTTTGCTGGGATAGAT
CTTTCGCCGGCGTTCTTGTAGACAGGAATTATCGATGGGAATTTCCAAAT
CGATGGAAAGGAATTTCCGATATAACTTAGCAAGAATAGGTAACAATTCC
GGTGAGCACTTCTGAAGAACGATGACAGGGATGCCGTCAGGTCCAGTGGC
TTTAGATGGATTGAGACTAGCAATGATTGTGGCCACTCTGGAGGTAGTAA
TTGTACACTTTCAAGATGACGGTCAGTTCTAGAAGGGAATTCGGGAGGCG
AATGACCAGAGTCGTCAAGAGTTGAATTCTTACTAAAGAGCTCGGCAAGT
AGTTCAGTTTTGTCTTTGGAGGATGTGAGGAATTCGGGCCCGTTAAAAAG
GGGCGGTATTGAAGACTTCCCATCGCTCCTGATGATATTGATAATACGCC
AAAAGTCCCGAGAGCCAACTTGCTGAGAAGCAATGCGACTCTGAATTCTC
TGCTGGTATTCAGATTTGGCTTTACGGATGACAGACTTACAGTGATTACG
GGCTTGAGTGAAAAGCCGTTTATTTGCAACAGATTGCTCTCGCTGAAATC
GATGGAAATAATGGGTACGATGAGCTATGGCCGCTGCACATGCAGGGGAG
AACCAAGGAGATGAGTGGGGTTTCATTTGATTCTTCCTGGAGGGCACAAA
GGCATCAATACCAGCCTGTATCCAGGATGAAACCTCTTCAGCACAATCGT
CAGCCCGTTTAGCAAAGAATTCTTGCCAAGGATCATCTCTAAGGAAGTCA
CAAAAATTATCCCAGTCACCCTTGTCATAGCTGTAAAGTGTTCTATGAAA
AGGTGACTCGCGAGTATCTTTACAGTTTAAGGAAATCTCGGCTGACACAA
CAATAAGGTCAGAGATACCAATATGTGGATGATGCGTAATTTTGCAAATG
CCCGGATCCCTCTGGTCGGAATACCGTGTAGGAAAATTCACGAGCTGTGT
CAGAGAGTGTCATAGAGCGAAGCTGTATCTTTCGATACCTGCANGATAGA
GCGAAGCTGTATGTTTCGATACCTGCATGCAGCATTCGTACCCTTGGAGT
ACCTTAGCCAGTGTTTATGGTGGACATTGAAGTCACCAAATATGAATATG
TTCGCTGGATTGTATGTGGAGAGGGCCTTGTCAAATGAATCAGATATGGC
ACGAAGAACTAAGCAGTCCTGAGATGATGGCTAGCCGTAGAAAGTATAGA
AAACTAGTGGAGTGAAGGGGTGATGATCTAAAGCACATAAATGGCTCCTT
AGCATCTTCTAAATCCTTTTCCCTAGCAATATGTGAAGTGTAGCGCACGA
AAAGGCCCAGTCCATGCATGTGGCGGTCAGAGTCTTTGCGTAAGAGCGGG
AGATAGCCTGGAATGATGAAGTCAGAATAGGAGATTGAGGAATTGAGATT
GGTTTTGCATAGTGCTAGATATCAGGGAATTGATTTGAACAAATAGTTCA
GTATCAGCAAAATTTGAACGAATTTCGTGAATATTGGTAAAAGAGAGACT
AAGCGGCTTACTAGTAGGTGATTTCTTAGAACCTGGCTAGCTTTTACTCT
GTTTGCGTCTACTAGTCATGATAATATATTACGACCCAAAAGATGCGCAT
TCACCGTTATCCTCATGATTACCCTTTGAAGTTTATATGGGAGTGTCTAA
ATAACTCTGGCCTCGTGGATCCCCTGCCGGAGGCATTTATAGGGACACCT
AACCATGCGCGTTCATGGCACTATAAATGCCAACGCCATTATACGACTGT
TGAAAGAGCAGCCTCTCCAAGCGCTACCAAGGAGTTCGGGCTCCTATACT
ACCAGCCGGGAGAGTAGCAGCCAGTGAACTACAAAATCCGGTACCCTCAA
TTAAAATAGACACAAAACCACAGCATTTATTAGGCACTCATAAGTGTACT
GAGTGTATTTACATATGAGGGGTCAAATTATGTATTGGTAACCAGTGTTC
AATGCCCTAGTCGGGAAATAAGGTTGATCAACCTCTAACTTGACCAATGA
CAAGGAAGGAGTCATGAAGCTGGGCGATGGAGAAAACCCCATCTACTCCT
AAATCTGATACAGGTTGCACTGGGTTACAGCTTGGCCAGTAGCAGCCACA
TGATGGAATTTTGCCGACCTGACAATGGGCTTATTTGAAAGTTGAAATTT
GAACAAGGTTAATTTTCCAACAACTGAAAGTTGTTAATAGTTTTGTCAAG
GGATCGTATCTGATTGAAACCTCATTGAGTTATGTAACTTTCTTACAGTT
ACAGTGTAGCTGGATCATTCTTTGATTTGATAATGTTCTTATGAAAAATT
TCACCAGTGCTCTGCTAATCTGCCTCTGCCATTGTTCCTGGCTGGCAGAC
AGTCCAATTCTTTTATAGGTTTATGTAGTTATGGGGCCGGGGGTAATTCA
CCTCTTAATAAACTACTGGACAGATCACAGTGGAAGCCCTTTCTCATTGC
TCTTGCCCTGGGTGAGGAAATGGGATCTTTTAGTTTATAGTGTGTCCACA
GCAGAAGATGGGACAACAGTATCAGGGGAAGCCACTAGAAGGTACAAAAC
TGACTTTGACCTTTGTTTTCCCAAGGCCTATATATCAAATATAATCATAA
TCAACCCATAGCTTGCTGAGTTAAATGCTGGTCGAAGTATCTGGAAATTA
AGGCAGACTTAAGAAAAATACACAATGTCTTCTTTACGGATGTCATAGCA
TTATCTTTCTGTATCGCAGGAATTGTGTGCTGCTGCAGAGCATGGATTCA
TAGAAAGACTACAACAGCTGTTAGACGGAGGAACTAACCCTGATGCTTCC
GGCATAAACGTTGGTGAAAAATTCTAATCTTAATGGACATAATTGCCGTA
ATTGTTAGTTGTACACCTTTAGGCATTTGGCAGTGTTTGTATATTTGGAG
CATAAAACTATCGTTTTCATACAAAGAGTTTGGAGTAGTTGGCACATCAT
GCAGTATAAAACTATTGGATACCATAAAGAAAAAAGATGTTTGATCGTTT
ATGTCAGGTGATGCATAAAGAAGAATATTTTTGCTCTATTGCAATTAATT
ATTTTTCAGCTGGCCACTCCGCTTCACTGGGTTGCAGGAAATGGCCATAC
AGGAGCAGTGCAACTTTTAGTCACCTTCGGAGCTGATCCAAACAAAATGG
ACTGGCAGGTACGTCACTGGCCAATCACGTCACCGCTTGTGGTCAAGGGG
CAACGTGATTGGCTGGTAATCTCCAATCCAGAAACAGGAGGGGGAGGATA
TGATTGGCTGACTGCTAGCGAGCGCTAACGTAGCGGGGTCTGTCTATCTA
TTCATATACTGTAAATGCATTTAGGATCGCATAGTTTTTATTTCGCCCTA
AGGCGAAAATGGAGCGTTCACGGTGGTTTTAAGTTCGCGGCAGCACTACA
GTCACATGCAGCTACAGTATTGGATAAAATATATGCGGTGGCTTTAAGTT
CACGGTGAAACGGTCGCCGCGAAAACTGCGAACATAAAACCACCGCGAAC
ATTTCTGCATTACAAGCGGCTAGCTTGACATGCAGTATCTTATTACAGGC
AAGAAGATAGTGTCTGTGCTCACCCTAACTGTCTAACATGCAAGAACTAG
GCCACAGTACATCTTGATAAGATATCTAACTCGTCTTATGTTTTTTACGT
CGGTGCAAACAGTTGTGATTCGTGTTTGTTTCAGGGTTTCGTGCCCCTTC
ACTATGCTGCTCACAATGACTACACAGAAGTTGTCCAAACCTTGCTCATA
GCTGGAGCGGATCCAGATACCCGAGATAGTAGCGTAAGTATATCCAAGGT
CTGTTTTAAAAAAGCATAATCGTGATCTGTAAAGGTGCAATATCATGTCT
TCCAAGTTCCAAGTCAAGTCATTCTTTCATGCTGAGCCGATGGCTGTATA
CATGTCAAACCCTCATGTACAGGTCTGCGATCCGTCCTTCTCGCTGCGGT
ATAGCACCGGCCAGACGTCAGCCAATTAGATACTTCCCCTTTGTTGTTGG
AGGGACGGTCACCAGCCGATCACGTTGCCTCTTGACCGCAAGTGACGACG
TAATTGGCTGGTGATGGCTGACCGGCGCTAACTGAATGAGAAGCATGGAT
CCGGCAGGCCGGTACGCTAATTAAGGCTGTTGCTTGATTCATATTTTAGG
CGGGCATGGCGTGAGCGGATGAGACAGGTAGGGGCATCTGTGCTTGACTA
CATTACATAAAACAGTTTTCAACCTACTCATCACATATCTATCGCAACTA
CTATTTGAAATTATGAATCTTAATGTTACACTTCTTTATAGGATTCTGGG
CTCCACACCCTAAAAGGATGATTTAGCTTTTGAAATCATCCAACCCACTC
ATCATCGAAAGTGTGGGACTTTTTTTTTTCCACTACTTTCAAAGAAGAAG
TCAAACCCCGCATTAGTACCGTAGATATAGAAACTTATTGTAGACAAGCA
ATATAGTATGATATTTTATCACATGTATGCCTTATGTTTTACTTATGTTT
GTACCTCGACATTGTTGTCAACATGCAATTGGCCTACATACTTCCTTATT
CTTTATCTACGCGAACATAAAACGAGATCATAGTGAGAATATTTTGCTAA
CCGTTCTCTTATTCTCAGGGCCAGCATCTTTAAATGCATTTCTTGTTCCA
CAGGGCATCACACCAGTTCATTCGGCATCCTACAGCGGCCATGCAAGAAC
CGTGCATGCTTTGATCCAAGGCGGTGCGAATCCAAACGAACAGGACATGC
AGGTATGTCGAACGTAGACTATGTAAGGCTGCACCAAGTAATTTTCTGCA
CTGCTGACAGGATCATCCTGGTAGGAGTTTTACACAGGATCGTTGTGACA
AACTACCGAGGCAAACTACTACCGGGTGCCAAAGTAGGGTTGTCGGGTTG
GAGTTATCGAAATTTGGCGGTTAACAGGATATGAGAGAGTCTCAGAGAGA
CAAACCACCACTATAAGAGTATCGCCCTACATGTAAATACGCCCTACGCC
TCGGTTTACGCCCAGATGAACACAGTTAAAATTGTAAAACATCCGGTGAA
ACACCAATACCCGTTGGTACAGTACCATATGCCAACAATTCTTTGGAAAA
AAAAAAGAAAATCCTGTCAGAGGTGGAAAAATCTGCACTACTTACAGGAT
CATCCTATCAGCAGTAGAAAAAAAAAATGCACTGCTGTCAGGATCATCCT
GTTAGCAGTGCAGATTTTTCAACTGCTGACAGGATCGTACATGTGCAGTA
CGACACATGTGCCGTAAAACGGTGGTGTAAATGCGCACCACGGTCAAAAT
ACTAGTACTAGTAAGCAAGATGGCGTCGAATTCAACAGAGCATGTGGGTT
CGGTCGCTAAATATGTGAGCATAAAAGTGAAAAAGGGCGGCAACGTTGTT
GTTGATTGGTACGCTCTCGATGTCGGTCAACCTTACGAGAGACTTGTAGC
GGCGAGTGAGTTTCGGCCGTACAATTTTAAGCAAGTCTTTTCAAGTCAAC
TACAGTGCATTTCTTCTGCAATGACGAGAAGATCGGGAGAGGCATTGAAG
TTTACTCCGTCCTGCAGGTGGGGCAGGCAACCAAGTAGTTCAGGTGTTTC
ATCCGCATGGAGGTCGACAACACAGCTGCCATAACTAAAGCTCCTAGGCC
CAAGTCTGTTTTTGAGGTATGAAAAGTTCCGTTCTTTAGTCTGTCATCCA
TACAAAGTATTTGATGCAGCCTAAATAGGAAATTTAGATATCACTCAGGG
CATGTTGCTTTGATTGTCCGTTTGAAAAAAAAATGTCGACCATACTGTAA
ATCGTACAAAGAAGCTACAAAATAAGCAAATGTGTGCTTTAGATTGCAAA
AAATGTCCTAAAACAAGAGGTAGAAGTCAATTCCAAAATCAAAGAAGAAG
ATGTCAAAGTACAAAAAAGTAAGAAAAGGAAAATGCATAAAAAAAGGGAT
TTTAGTCGAGTTACTAGAATATTATTCAATGAGTGACAGTACACGTACCT
CCATATTTTCGATGTCTAATGTACATCTTGATCACGGAATGACCTAGTTT
CGCGATACACGAGACTAGGTAGAGACTTGTGTAGATCTTCCGGAAATGGC
ATCAAGTTTACCATTGAGAGGGAAAATGCGACAGTCGCCTCCCTATGCTG
AATGTCATGATGATAAGAAACCCTTCATCGCTATAGATGTGTTCCGCAAA
GAGACCCATACCGACCACCATTTGGCGAGCTCGTTGCATTTTGCCACTTA
AAAAGATTCGCCATTTGAAGCGGCACATTTGCGGCGTTAGAGTTAGGGTG
GCGGTAGGGCTGCAATAGGGCGGCAAGCAGGCGTTTATGCGCGACACATT
GGCGGTAGTCATTCGCACGCAATGACATGTAACTAATTATGACGAGGTTA
AACTCGTCTTTCAATGCTTTGTTGGCAGCAATATTATATTCTATAGCACT
CCTTGAATCATAATGAATTGAGCTTTATACTTCTCTTTTCCAGGGAAACA
CGGCCCTACATAATGCTGCTACGTACGGTCACTCCGATTGCGTGAAAGAA
CTTCTAGCGGCCGGTGCCGACAGAACTATTCGAAACAAAGTACTAAACGA
TTTTGTATCTTAACTTGAGGTCACATTCGTCGTTGTTCGTCGTACGATTT
TGATGTCGTAGAATTTTCAAGCAGGCTGTGAAAGAACTAACCTTTGACAA
GGCCTTTTGGTCACAAGGCAGCTTAGAAGTTTTATCAAGACACTTGCACG
AATATCCTAAGAACGCTATTACTCTGCGATCATACGGCGACAGTAGGACG
AATATATATATGTCCAGGTCCTCAGCTTTATCTATATGTTGCAACCGTTG
TTGTTTATGGTTTCTTAGTTTTTCGGTACTAGACATCAATATGTATTACC
TGGATCGGCTGCGTGTACAATCCCATAGAAATGTGATAGTCATTACAAAG
CGTCCCCTTTTTTATCCACAGGGCGGTAAAACACCAGAAGAAGTAGTTGG
GGACCCTCTTGGATGTCGTGAGCCTGTTTCACTAGAAGATAGAAAGGCCG
TGCTGAAAGCTTTCCGTGAATGCCAAGTAAGCTATAAGACCAATATACTT
TTTATTTGTTTCTGAAAACTATGAAGTCGCCTCTAGCTTTCGATAAAGTG
TTCTATATGTCAATTAAGTTAATCAAGATCATCTTATTCTTACATCGTCA
TCCTTATTTGTAAAGATCACCTCTGTATTGTACTTTTCCCTAACTGCAGC
ATTAATGTTCTCTGCAGGGTAAGACAGAAATGTGGTGAGGAATATGGTAC
AAAAATTTGAAATGTCGGTGAGCCTTTTTTTAATTACTTTTTACGTCGTG
CAACAACCCTGCATCATTATCTGTGTCCATGTGCGCGTGTGTGTATATTT
TGTGTCTGTGCGTATGTACGTGTGTGTGTGTTCGTCTGTGTATATGTGTG
TTTAGCATGTACGTTTTGGGGTGTATGAGTGCGTTTGTGTGTCTGTTTGC
ATGTGTGCGTGTTTCTGTGTGTGGATGTGTGTTTGTGGGCGTATGAATGT
GCTTGTGTGTCTTTATCTTTAGAAAAATTACAACAAGACAATACAGAGTG
GAGCCCTAGGCAGACAAGCTGGTTATACGGGCCACCCAACATAACTTTGT
GTCACTGTGTGTGTGTGTGTGTGTTTGTGTATGTGTGTGCGTGTGAGTGT
GTGTGTGTGTATGTGTGTGCGTGTGAGTGTGTGTGTGTGTATGTGTGCGT
GTGTTTGTGAGTCTGAGTGTGTGTGTGAGTGTGTCTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTCTGTGCGTGTGTGAGTGTGTGAGCGATAAT
AACAGCTATCTGGGTGAGAATAGGCATAGTGTGCCTTTAAAGTGAGAGCG
GTGCAGATAAGGTAATAAGACAACGTGTTTTTTCAAAGATAGAGAGGCAT
AAAAACGACTTTTAAAATTTGATCAACCCTTTCACCACGTCTTTAATTCC
TTGTGTACTTTAGTTGTCCTTAAATGGCAGTGCAGAAGACGCATACGGCA
TCTTATTGGACCAGAGAGGTTGCAACACATCAACTCACTTCCTTTACCGT
ACCCCCTGATCGACTATCTTCTTTCTACCAACTAGTTCTACAACCTGACT
TCAATACCTCAATAGAACACCTGGTCTGTTATGACAGACTGTAAAAGAAA
CGTTGCTAGTGAACACTACATCTAGATCTCAGTTCCAGAGAATCCTTGCC
ACACAGCAACCAGCGCTAGCAGGTTTCTTGTAACACAACAAACTGGTAGC
AGACACACAATGCCTGTGTCAAGTTTATGTATTCAATTGGTGTCCTATAG
TATAAGTCCGTATGGGCTGGGCGACTTTTTGAGACGCAGGACACGAAAAT
AAAATATTCATTCATTCAATAATTAATTTATTCAATGCTACGAGAATATT
CATGCAGACAAATGAAACCAAATAAATGCCACAATTCATGTACAGATTCA
TATATATATATATATATGGAACTGTTTGCCTCATATAATACAATCTGCAG
CTTGCTATGTACATACGTCAGTCCCTTTGATTAGCCTGCAAATGTCTTTA
ATAACTTTTTCTGTAATCTTGTATGTGAATTCAGTGTATGTTGCTTTATG
TACATGTCTCCTGAGCATGGAGAAATGGCTACTTATTGGTTGCATGATAG
CTTATGGAGTGGATAAAGCATCGAAGTAGTTTATGGTACACTATTACTCA
CCCCGTATATTATGTTGTTTCAACTGAGCCTAAGCTTTCCAAAATTATAT
TTACTGTGTTCGTACCTAATGTGTGGAACAATGAGGTTGTGTAGGCCAAG
ATACAAACTTATAAAATGAAGTTTAAAAAACGTATCTGGATCATACGTGT
AACTACAAAGGAATGACAAGATAACATATGGTTTGAATTGTACGTGT Coding sequence (CDS) from alignment at Sc0000138:770830..784476- >transcript:BL85721_cuf0 ID=transcript:BL85721_cuf0|Name=transcript:BL85721_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=5016bp|location=Sequence derived from alignment at Sc0000138:770830..784476- (Branchiostoma lanceolatum)
ATGAACGACAAGGAAAGGGAATTGTGTGCTGCTGCAGAGCATGGATTCAT
AGAAAGACTACAACAGCTGTTAGACGGAGGAACTAACCCTGATGCTTCCG
GCATAAACCTGGCCACTCCGCTTCACTGGGTTGCAGGAAATGGCCATACA
GGAGCAGTGCAACTTTTAGTCACCTTCGGAGCTGATCCAAACAAAATGGA
CTGGCAGGGTTTCGTGCCCCTTCACTATGCTGCTCACAATGACTACACAG
AAGTTGTCCAAACCTTGCTCATAGCTGGAGCGGATCCAGATACCCGAGAT
AGTAGCGGCATCACACCAGTTCATTCGGCATCCTACAGCGGCCATGCAAG
AACCGTGCATGCTTTGATCCAAGGCGGTGCGAATCCAAACGAACAGGACA
TGCAGGGAAACACGGCCCTACATAATGCTGCTACGTACGGTCACTCCGAT
TGCGTGAAAGAACTTCTAGCGGCCGGTGCCGACAGAACTATTCGAAACAA
AGGCGGTAAAACACCAGAAGAAGTAGTTGGGGACCCTCTTGGATGTCGTG
AGCCTGTTTCACTAGAAGATAGAAAGGCCGTGCTGAAAGCTTTCCGTGAA
TGCCAAGGTAAGACAGAAATGTGGTGAATGAACGACAAGGAAAGGGAATT
GTGTGCTGCTGCAGAGCATGGATTCATAGAAAGACTACAACAGCTGTTAG
ACGGAGGAACTAACCCTGATGCTTCCGGCATAAACCTGGCCACTCCGCTT
CACTGGGTTGCAGGAAATGGCCATACAGGAGCAGTGCAACTTTTAGTCAC
CTTCGGAGCTGATCCAAACAAAATGGACTGGCAGGGTTTCGTGCCCCTTC
ACTATGCTGCTCACAATGACTACACAGAAGTTGTCCAAACCTTGCTCATA
GCTGGAGCGGATCCAGATACCCGAGATAGTAGCGGCATCACACCAGTTCA
TTCGGCATCCTACAGCGGCCATGCAAGAACCGTGCATGCTTTGATCCAAG
GCGGTGCGAATCCAAACGAACAGGACATGCAGGGAAACACGGCCCTACAT
AATGCTGCTACGTACGGTCACTCCGATTGCGTGAAAGAACTTCTAGCGGC
CGGTGCCGACAGAACTATTCGAAACAAAGGCGGTAAAACACCAGAAGAAG
TAGTTGGGGACCCTCTTGGATGTCGTGAGCCTGTTTCACTAGAAGATAGA
AAGGCCGTGCTGAAAGCTTTCCGTGAATGCCAAGGTAAGACAGAAATGTG
GTGAATGAACGACAAGGAAAGGGAATTGTGTGCTGCTGCAGAGCATGGAT
TCATAGAAAGACTACAACAGCTGTTAGACGGAGGAACTAACCCTGATGCT
TCCGGCATAAACCTGGCCACTCCGCTTCACTGGGTTGCAGGAAATGGCCA
TACAGGAGCAGTGCAACTTTTAGTCACCTTCGGAGCTGATCCAAACAAAA
TGGACTGGCAGGGTTTCGTGCCCCTTCACTATGCTGCTCACAATGACTAC
ACAGAAGTTGTCCAAACCTTGCTCATAGCTGGAGCGGATCCAGATACCCG
AGATAGTAGCGGCATCACACCAGTTCATTCGGCATCCTACAGCGGCCATG
CAAGAACCGTGCATGCTTTGATCCAAGGCGGTGCGAATCCAAACGAACAG
GACATGCAGGGAAACACGGCCCTACATAATGCTGCTACGTACGGTCACTC
CGATTGCGTGAAAGAACTTCTAGCGGCCGGTGCCGACAGAACTATTCGAA
ACAAAGGCGGTAAAACACCAGAAGAAGTAGTTGGGGACCCTCTTGGATGT
CGTGAGCCTGTTTCACTAGAAGATAGAAAGGCCGTGCTGAAAGCTTTCCG
TGAATGCCAAGGTAAGACAGAAATGTGGTGAATGAACGACAAGGAAAGGG
AATTGTGTGCTGCTGCAGAGCATGGATTCATAGAAAGACTACAACAGCTG
TTAGACGGAGGAACTAACCCTGATGCTTCCGGCATAAACCTGGCCACTCC
GCTTCACTGGGTTGCAGGAAATGGCCATACAGGAGCAGTGCAACTTTTAG
TCACCTTCGGAGCTGATCCAAACAAAATGGACTGGCAGGGTTTCGTGCCC
CTTCACTATGCTGCTCACAATGACTACACAGAAGTTGTCCAAACCTTGCT
CATAGCTGGAGCGGATCCAGATACCCGAGATAGTAGCGGCATCACACCAG
TTCATTCGGCATCCTACAGCGGCCATGCAAGAACCGTGCATGCTTTGATC
CAAGGCGGTGCGAATCCAAACGAACAGGACATGCAGGGAAACACGGCCCT
ACATAATGCTGCTACGTACGGTCACTCCGATTGCGTGAAAGAACTTCTAG
CGGCCGGTGCCGACAGAACTATTCGAAACAAAGGCGGTAAAACACCAGAA
GAAGTAGTTGGGGACCCTCTTGGATGTCGTGAGCCTGTTTCACTAGAAGA
TAGAAAGGCCGTGCTGAAAGCTTTCCGTGAATGCCAAGGTAAGACAGAAA
TGTGGTGAATGAACGACAAGGAAAGGGAATTGTGTGCTGCTGCAGAGCAT
GGATTCATAGAAAGACTACAACAGCTGTTAGACGGAGGAACTAACCCTGA
TGCTTCCGGCATAAACCTGGCCACTCCGCTTCACTGGGTTGCAGGAAATG
GCCATACAGGAGCAGTGCAACTTTTAGTCACCTTCGGAGCTGATCCAAAC
AAAATGGACTGGCAGGGTTTCGTGCCCCTTCACTATGCTGCTCACAATGA
CTACACAGAAGTTGTCCAAACCTTGCTCATAGCTGGAGCGGATCCAGATA
CCCGAGATAGTAGCGGCATCACACCAGTTCATTCGGCATCCTACAGCGGC
CATGCAAGAACCGTGCATGCTTTGATCCAAGGCGGTGCGAATCCAAACGA
ACAGGACATGCAGGGAAACACGGCCCTACATAATGCTGCTACGTACGGTC
ACTCCGATTGCGTGAAAGAACTTCTAGCGGCCGGTGCCGACAGAACTATT
CGAAACAAAGGCGGTAAAACACCAGAAGAAGTAGTTGGGGACCCTCTTGG
ATGTCGTGAGCCTGTTTCACTAGAAGATAGAAAGGCCGTGCTGAAAGCTT
TCCGTGAATGCCAAGGTAAGACAGAAATGTGGTGAATGAACGACAAGGAA
AGGGAATTGTGTGCTGCTGCAGAGCATGGATTCATAGAAAGACTACAACA
GCTGTTAGACGGAGGAACTAACCCTGATGCTTCCGGCATAAACCTGGCCA
CTCCGCTTCACTGGGTTGCAGGAAATGGCCATACAGGAGCAGTGCAACTT
TTAGTCACCTTCGGAGCTGATCCAAACAAAATGGACTGGCAGGGTTTCGT
GCCCCTTCACTATGCTGCTCACAATGACTACACAGAAGTTGTCCAAACCT
TGCTCATAGCTGGAGCGGATCCAGATACCCGAGATAGTAGCGGCATCACA
CCAGTTCATTCGGCATCCTACAGCGGCCATGCAAGAACCGTGCATGCTTT
GATCCAAGGCGGTGCGAATCCAAACGAACAGGACATGCAGGGAAACACGG
CCCTACATAATGCTGCTACGTACGGTCACTCCGATTGCGTGAAAGAACTT
CTAGCGGCCGGTGCCGACAGAACTATTCGAAACAAAGGCGGTAAAACACC
AGAAGAAGTAGTTGGGGACCCTCTTGGATGTCGTGAGCCTGTTTCACTAG
AAGATAGAAAGGCCGTGCTGAAAGCTTTCCGTGAATGCCAAGGTAAGACA
GAAATGTGGTGAATGAACGACAAGGAAAGGGAATTGTGTGCTGCTGCAGA
GCATGGATTCATAGAAAGACTACAACAGCTGTTAGACGGAGGAACTAACC
CTGATGCTTCCGGCATAAACCTGGCCACTCCGCTTCACTGGGTTGCAGGA
AATGGCCATACAGGAGCAGTGCAACTTTTAGTCACCTTCGGAGCTGATCC
AAACAAAATGGACTGGCAGGGTTTCGTGCCCCTTCACTATGCTGCTCACA
ATGACTACACAGAAGTTGTCCAAACCTTGCTCATAGCTGGAGCGGATCCA
GATACCCGAGATAGTAGCGGCATCACACCAGTTCATTCGGCATCCTACAG
CGGCCATGCAAGAACCGTGCATGCTTTGATCCAAGGCGGTGCGAATCCAA
ACGAACAGGACATGCAGGGAAACACGGCCCTACATAATGCTGCTACGTAC
GGTCACTCCGATTGCGTGAAAGAACTTCTAGCGGCCGGTGCCGACAGAAC
TATTCGAAACAAAGGCGGTAAAACACCAGAAGAAGTAGTTGGGGACCCTC
TTGGATGTCGTGAGCCTGTTTCACTAGAAGATAGAAAGGCCGTGCTGAAA
GCTTTCCGTGAATGCCAAGGTAAGACAGAAATGTGGTGAATGAACGACAA
GGAAAGGGAATTGTGTGCTGCTGCAGAGCATGGATTCATAGAAAGACTAC
AACAGCTGTTAGACGGAGGAACTAACCCTGATGCTTCCGGCATAAACCTG
GCCACTCCGCTTCACTGGGTTGCAGGAAATGGCCATACAGGAGCAGTGCA
ACTTTTAGTCACCTTCGGAGCTGATCCAAACAAAATGGACTGGCAGGGTT
TCGTGCCCCTTCACTATGCTGCTCACAATGACTACACAGAAGTTGTCCAA
ACCTTGCTCATAGCTGGAGCGGATCCAGATACCCGAGATAGTAGCGGCAT
CACACCAGTTCATTCGGCATCCTACAGCGGCCATGCAAGAACCGTGCATG
CTTTGATCCAAGGCGGTGCGAATCCAAACGAACAGGACATGCAGGGAAAC
ACGGCCCTACATAATGCTGCTACGTACGGTCACTCCGATTGCGTGAAAGA
ACTTCTAGCGGCCGGTGCCGACAGAACTATTCGAAACAAAGGCGGTAAAA
CACCAGAAGAAGTAGTTGGGGACCCTCTTGGATGTCGTGAGCCTGTTTCA
CTAGAAGATAGAAAGGCCGTGCTGAAAGCTTTCCGTGAATGCCAAGGTAA
GACAGAAATGTGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000138 | genome | Sc0000138:770830..784476 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85721_cuf0 |
| Biotype | protein_coding |
|
