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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85571_cuf0 >transcript:BL85571_cuf0-protein ID=transcript:BL85571_cuf0-protein|Name=transcript:BL85571_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=388bp
FKLKSLLYSERNIPIHLGLSLFDKFVRPIFLYGAELTCFDQTSKTVKYIV
SKQIPQSSPKNVLSILLKKLGLEDSFPASIRKSVCSDSTHSYVIRFEKKI
DKDKLLRLASDLNLEKDNLVIENLRLPPHIPEFDIIDMNFHKFLLGVHGK
SSNDGIRGELGTFPIKIKAEIQIIKYWHRLLNLPQDTLLREAYDVLHSGN
HDWVNHVNDILNYNGFGHVWTNPRLYQTDMLTNQLRQRLQDIYIQEWHSS
IQNNSKLSIYSALKTRYGQEKYLASIHNFEIRRSITKIRICSHKLNIEAG
RYRKIPRDQRFCPFCPNEIEDESHFIMNCSRYKDKRSKLFTFISGCSNEF
NALRSVDRFNYILGGDNPYCVQIGIFIKECLDIRTSNV Run BLAST on NCBI mRNA from alignment at Sc0000004:2293962..2295287- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85571_cuf0 ID=transcript:BL85571_cuf0|Name=transcript:BL85571_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1326bp|location=Sequence derived from alignment at Sc0000004:2293962..2295287- (Branchiostoma lanceolatum)
ATTCAAACTCAAGTCACTTCTATATTCTGAAAGAAATATTCCAATTCACT
TAGGGCTCAGCCTATTTGACAAATTTGTACGGCCTATATTTTTATATGGA
GCCGAACTAACATGTTTCGACCAAACCTCTAAAACAGTGAAATATATTGT
ATCTAAACAAATTCCTCAATCTTCTCCAAAAAACGTACTCTCTATTCTTT
TAAAGAAACTTGGTCTGGAGGATAGTTTTCCTGCAAGTATTAGAAAAAGT
GTCTGTTCAGACTCCACCCATTCTTATGTGATTCGTTTTGAGAAAAAAAT
AGACAAAGATAAATTACTCAGGCTGGCGTCTGACCTAAATTTAGAAAAAG
ACAACTTAGTAATTGAAAATTTACGTCTTCCTCCACATATACCAGAATTT
GATATTATTGATATGAATTTCCATAAATTTTTACTCGGTGTGCATGGAAA
ATCATCCAATGACGGTATCCGTGGCGAATTAGGAACATTCCCAATCAAGA
TTAAGGCCGAGATACAAATTATCAAATACTGGCATCGTTTATTAAATTTA
CCCCAAGATACCCTGTTACGTGAAGCTTACGACGTTCTACATTCTGGTAA
TCATGACTGGGTGAACCATGTTAATGATATTCTTAACTATAACGGGTTTG
GGCATGTATGGACAAACCCTAGACTATATCAGACCGATATGTTAACCAAC
CAGTTACGACAACGTCTGCAGGATATATATATACAAGAATGGCATAGTTC
TATTCAAAACAATTCAAAACTGTCCATTTATTCCGCCTTAAAGACAAGAT
ATGGACAAGAAAAGTATCTCGCAAGCATACATAATTTTGAAATTCGTAGA
TCAATTACAAAGATAAGAATATGTAGCCATAAATTGAACATTGAAGCTGG
AAGGTATCGTAAAATTCCCCGTGATCAAAGGTTTTGTCCATTCTGCCCAA
ATGAAATTGAAGATGAAAGTCACTTTATCATGAATTGTTCAAGATATAAG
GATAAACGCTCAAAGCTATTCACCTTTATATCCGGTTGTTCAAATGAATT
CAATGCGCTCCGTTCTGTCGATAGATTCAATTACATACTAGGAGGTGATA
ATCCTTACTGTGTACAGATAGGTATATTCATCAAAGAATGTTTGGACATT
AGAACAAGCAATGTATAAGTATATCACATGCGATATTTCGATATGTTGCC
CTATCCCATATGATTGTATGTAATCAAACTCATTTGTATGCACTTATTCG
TTTGTATGTATGTATGTAGTAGACCTTACGAAAGTCGCTGTGCTTTTGTT
GTGTCAATAAAGATCTCTCTATAAAT Coding sequence (CDS) from alignment at Sc0000004:2293962..2295287- >transcript:BL85571_cuf0 ID=transcript:BL85571_cuf0|Name=transcript:BL85571_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1167bp|location=Sequence derived from alignment at Sc0000004:2293962..2295287- (Branchiostoma lanceolatum)
TTCAAACTCAAGTCACTTCTATATTCTGAAAGAAATATTCCAATTCACTT
AGGGCTCAGCCTATTTGACAAATTTGTACGGCCTATATTTTTATATGGAG
CCGAACTAACATGTTTCGACCAAACCTCTAAAACAGTGAAATATATTGTA
TCTAAACAAATTCCTCAATCTTCTCCAAAAAACGTACTCTCTATTCTTTT
AAAGAAACTTGGTCTGGAGGATAGTTTTCCTGCAAGTATTAGAAAAAGTG
TCTGTTCAGACTCCACCCATTCTTATGTGATTCGTTTTGAGAAAAAAATA
GACAAAGATAAATTACTCAGGCTGGCGTCTGACCTAAATTTAGAAAAAGA
CAACTTAGTAATTGAAAATTTACGTCTTCCTCCACATATACCAGAATTTG
ATATTATTGATATGAATTTCCATAAATTTTTACTCGGTGTGCATGGAAAA
TCATCCAATGACGGTATCCGTGGCGAATTAGGAACATTCCCAATCAAGAT
TAAGGCCGAGATACAAATTATCAAATACTGGCATCGTTTATTAAATTTAC
CCCAAGATACCCTGTTACGTGAAGCTTACGACGTTCTACATTCTGGTAAT
CATGACTGGGTGAACCATGTTAATGATATTCTTAACTATAACGGGTTTGG
GCATGTATGGACAAACCCTAGACTATATCAGACCGATATGTTAACCAACC
AGTTACGACAACGTCTGCAGGATATATATATACAAGAATGGCATAGTTCT
ATTCAAAACAATTCAAAACTGTCCATTTATTCCGCCTTAAAGACAAGATA
TGGACAAGAAAAGTATCTCGCAAGCATACATAATTTTGAAATTCGTAGAT
CAATTACAAAGATAAGAATATGTAGCCATAAATTGAACATTGAAGCTGGA
AGGTATCGTAAAATTCCCCGTGATCAAAGGTTTTGTCCATTCTGCCCAAA
TGAAATTGAAGATGAAAGTCACTTTATCATGAATTGTTCAAGATATAAGG
ATAAACGCTCAAAGCTATTCACCTTTATATCCGGTTGTTCAAATGAATTC
AATGCGCTCCGTTCTGTCGATAGATTCAATTACATACTAGGAGGTGATAA
TCCTTACTGTGTACAGATAGGTATATTCATCAAAGAATGTTTGGACATTA
GAACAAGCAATGTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:2293962..2295287 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85571_cuf0 |
| Biotype | protein_coding |
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