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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85493_cuf0 >transcript:BL85493_cuf0-protein ID=transcript:BL85493_cuf0-protein|Name=transcript:BL85493_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=419bp
VKGKSTTTQLLEVYEEIGEVLDKSGQVDVIFLDFCKAFDSVSHKLLVHKL
KSFGFSRQLLALFNDYLSERFQRTVIEGEMSDYLPVLSGVPQGSILGPFL
FLLFVNDLPDCVEFGKMAMFADDAKCFRRITSIFDCFKFQSDLDRLVAWG
KTWEMVFHPSKCSVVSMTRKTSPVEYPYSMSDSVLSRQDSYNDLGVHVQH
NLSWNSHVLKKISTCNSRLAMIKRSVGFNAPFTVKLNLYRSLVIPHLDYC
SQVWAPHTRLYQRKVEGVQRRATKYICNDYELNYKDRLTHTNLLPLCYRR
ELFDILFLFKCFRNVYCTNISHVLNVSRPTRSLRSTDQFQLVPRPCKTES
FSFSYFSRIAVIWNNLPLDIRQHMYSNLTLQSVKKLLISYYRSRLSDTFS
VDNLCTWTTTCRCSSCIVT Run BLAST on NCBI mRNA from alignment at Sc0000369:21514..22979- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85493_cuf0 ID=transcript:BL85493_cuf0|Name=transcript:BL85493_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1466bp|location=Sequence derived from alignment at Sc0000369:21514..22979- (Branchiostoma lanceolatum)
CGTCAAGGGAAAATCCACTACCACCCAACTTTTAGAAGTTTACGAGGAAA
TAGGTGAAGTACTGGATAAATCTGGGCAAGTTGACGTAATATTCTTGGAT
TTTTGCAAAGCATTTGATAGTGTCTCTCATAAACTCCTAGTACACAAATT
GAAATCTTTTGGGTTCTCCAGACAACTACTTGCTTTATTTAACGACTATC
TTTCAGAACGTTTTCAAAGAACTGTCATAGAAGGCGAAATGTCTGATTAC
TTACCTGTGTTGTCAGGTGTCCCCCAGGGATCCATATTAGGGCCATTCTT
GTTTCTATTATTCGTTAATGATTTACCTGACTGTGTTGAATTTGGTAAAA
TGGCCATGTTTGCAGATGACGCTAAATGTTTTAGAAGAATTACTTCGATT
TTTGATTGTTTTAAATTTCAGTCCGACTTAGATCGTCTTGTGGCCTGGGG
GAAAACCTGGGAGATGGTATTTCATCCATCTAAGTGTTCAGTTGTTAGTA
TGACACGTAAAACTTCACCTGTTGAATACCCTTATAGCATGTCAGATTCT
GTACTCAGTCGACAAGATAGTTATAATGACTTAGGAGTTCATGTACAACA
TAACTTATCCTGGAATTCTCATGTACTTAAGAAGATATCAACATGTAACT
CAAGACTTGCAATGATCAAGAGATCAGTAGGCTTTAATGCCCCATTTACT
GTTAAACTCAATTTGTATCGATCACTGGTGATACCACATTTAGACTACTG
TTCTCAGGTATGGGCACCGCATACAAGATTGTATCAGCGCAAAGTAGAAG
GTGTTCAAAGACGTGCTACCAAGTACATCTGTAATGATTACGAACTTAAC
TATAAGGACAGATTAACCCATACCAACCTTCTACCATTGTGTTACAGACG
AGAACTTTTTGATATCTTATTTCTTTTCAAATGTTTCCGCAACGTGTACT
GTACCAACATTTCTCATGTCCTCAATGTATCCAGACCTACTAGATCACTT
CGCTCTACAGACCAATTCCAACTTGTACCACGGCCATGTAAAACTGAATC
ATTCTCATTCTCTTACTTTAGTCGTATTGCCGTCATCTGGAACAATTTAC
CACTAGACATTCGCCAACATATGTACTCAAACCTCACCCTACAGTCCGTT
AAAAAACTCTTGATATCATATTATAGATCCCGATTAAGTGACACATTTTC
TGTTGATAACTTATGTACTTGGACAACCACTTGTCGTTGCTCATCTTGCA
TAGTGACATAGTTAACCGTTTACCCTGTTTTCCTTATCATTTGACCTTAT
TACTCTCATTTTTTTAATGTACTTCTTTCAGTATTTGATGTCTTTCATGT
ATTGTTTTTATCTCAACTTTGTAAATTTTCTGGGGGAGTCGGCCTCGTAG
AGGAACTAGATTCCTGTTGCCGGCGCCCCTCAGATTGTATGCAATCTGTG
AATTTGAATAAATAAA Coding sequence (CDS) from alignment at Sc0000369:21514..22979- >transcript:BL85493_cuf0 ID=transcript:BL85493_cuf0|Name=transcript:BL85493_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1260bp|location=Sequence derived from alignment at Sc0000369:21514..22979- (Branchiostoma lanceolatum)
GTCAAGGGAAAATCCACTACCACCCAACTTTTAGAAGTTTACGAGGAAAT
AGGTGAAGTACTGGATAAATCTGGGCAAGTTGACGTAATATTCTTGGATT
TTTGCAAAGCATTTGATAGTGTCTCTCATAAACTCCTAGTACACAAATTG
AAATCTTTTGGGTTCTCCAGACAACTACTTGCTTTATTTAACGACTATCT
TTCAGAACGTTTTCAAAGAACTGTCATAGAAGGCGAAATGTCTGATTACT
TACCTGTGTTGTCAGGTGTCCCCCAGGGATCCATATTAGGGCCATTCTTG
TTTCTATTATTCGTTAATGATTTACCTGACTGTGTTGAATTTGGTAAAAT
GGCCATGTTTGCAGATGACGCTAAATGTTTTAGAAGAATTACTTCGATTT
TTGATTGTTTTAAATTTCAGTCCGACTTAGATCGTCTTGTGGCCTGGGGG
AAAACCTGGGAGATGGTATTTCATCCATCTAAGTGTTCAGTTGTTAGTAT
GACACGTAAAACTTCACCTGTTGAATACCCTTATAGCATGTCAGATTCTG
TACTCAGTCGACAAGATAGTTATAATGACTTAGGAGTTCATGTACAACAT
AACTTATCCTGGAATTCTCATGTACTTAAGAAGATATCAACATGTAACTC
AAGACTTGCAATGATCAAGAGATCAGTAGGCTTTAATGCCCCATTTACTG
TTAAACTCAATTTGTATCGATCACTGGTGATACCACATTTAGACTACTGT
TCTCAGGTATGGGCACCGCATACAAGATTGTATCAGCGCAAAGTAGAAGG
TGTTCAAAGACGTGCTACCAAGTACATCTGTAATGATTACGAACTTAACT
ATAAGGACAGATTAACCCATACCAACCTTCTACCATTGTGTTACAGACGA
GAACTTTTTGATATCTTATTTCTTTTCAAATGTTTCCGCAACGTGTACTG
TACCAACATTTCTCATGTCCTCAATGTATCCAGACCTACTAGATCACTTC
GCTCTACAGACCAATTCCAACTTGTACCACGGCCATGTAAAACTGAATCA
TTCTCATTCTCTTACTTTAGTCGTATTGCCGTCATCTGGAACAATTTACC
ACTAGACATTCGCCAACATATGTACTCAAACCTCACCCTACAGTCCGTTA
AAAAACTCTTGATATCATATTATAGATCCCGATTAAGTGACACATTTTCT
GTTGATAACTTATGTACTTGGACAACCACTTGTCGTTGCTCATCTTGCAT
AGTGACATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000369 | genome | Sc0000369:21514..22979 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85493_cuf0 |
| Biotype | protein_coding |
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