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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85375_cuf3 >transcript:BL85375_cuf3-protein ID=transcript:BL85375_cuf3-protein|Name=transcript:BL85375_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=126bp
TDQHVYVITTDISGKQGGTNSSEGGAKPLPPPDVGKPIEVKVCKVSDMQD
GEMREVDVGGGKALLIKEDGEFSALGHKCTHYGAPLVKGVLCNGRVRCPW
HGACFNAKTGDIEDFPGLDSLPKFEV Run BLAST on NCBI mRNA from alignment at Sc0000196:232996..234684+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85375_cuf3 ID=transcript:BL85375_cuf3|Name=transcript:BL85375_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1689bp|location=Sequence derived from alignment at Sc0000196:232996..234684+ (Branchiostoma lanceolatum)
CTACTGATCAGCACGTCTATGTTATAACAAGTTAGTTGATTTGAGCATGG
CGCTAACTTGGATCATTGTAACTACTAAACATTGTGTTAAGAACTAAGCT
TCAACCCTGGCTACCTTTTCTAGTATCAAATATATACTCAGACAATATTA
ACAGACAAGCTGTAGTGTATTGATGGGTCAGACCAAGACATACAAAACTG
GTCAGGTAGGAGGGGTCGCCAGGGTGAAGCTAATATCCATCTAACCAACT
TCTAATCTTTATATAGATCATAGATTTACTTTCAAACTGTTGTGGTTTTA
TTGAGTATTATTAGTTAATAAATGTCACAGAAAATGAATTGATTTAAAAA
CATGTTCTCATTAAAGTACATTCAAAGTAGCCTCTACCAGGCTCCGCAGA
TCACTGGAAAAATAGTAGAAATTGGCCAAATAGACAGATAACATACCTGA
TGAGTTAGGTCGCAAACTGTAGCTCCTTTAGCAGACTAACTCATCAGGCA
TGTTATCTGTTTATTTGGCCAATTTCTACTATTTTTCCAGCAACCCGTAG
AGCCTGGTAGAGGCTACATTCAACGTAAGTATTTTTAAAACTCACCAAAA
TCAACTGTGTAATTCATTTTGAACTCTATTTTCCTTGTTTGAATCTCAGC
TGACATCTCAGGTAAGCAGGGAGGTACCAACTCTTCTGAAGGGGGAGCCA
AGCCCCTCCCTCCCCCAGATGTGGGCAAGCCCATTGAGGTGAAGGTGTGC
AAGGTTTCTGACATGCAGGATGGAGAGTAAGTCATCATATGTCATTCCTT
CCTTCCTTCCTTCCCTCCCCCTCCTCCCTCTCTATCTCTTTCTTTGATTC
CATCAGTCTTTAATCCTTTATTTCTTTCCTTTTCTTTTTTGTCATGTTTT
CTTTAGTTTCTCAAATTTTTAAGAAAAGCACAATTTGAGCAGACTATAGA
TAGTTTCGTTCAAAGCTATGATCATGACCTTCGATTGATTGATTTCTTTT
CATCAAACTCCTGGTGATGGTTCCTTGCTGCTGTGTTTTTCAGGATGCGA
GAAGTAGATGTTGGGGGAGGGAAAGCACTACTCATCAAGGAGGATGGAGA
ATTCAGTGCTCTTGGGCACAAATGTACCCACTATGGAGCACCCTTGGTCA
AAGGTAGGTCTTTAGAAACTTTTTCAGATACATGTACAATGTTGGCTGAC
TTACAAAGTTATAATCTATGACAGGACTTCAAAATATCTATATGATTAGT
ACATTATATTTGTACTATTGAATAGTCTACTTGGGATTTTTAGTGGTTGT
TTGCCATAGGATAAACTGTAATTCACTTTATCTTTACAGTAGCAAAATTT
CACAGTGTAAGGAAAATAGACATTTTCACTGAACTTTAACTTCACGGTGT
GGCGGCAAGTGATTTACGGAATGGGTGTGTGAGAGAGTCATAGATAATAA
CAACAGGCTTTTCACAGTGATGATAAGTTCATGGTGCAGAGGTGACCGTG
AAAACAGTGAACATAAAGTTACAGTGAAGGAAAAAAGAATAACAGTATAT
GATTCTATCTCTCCCCTGTTCCAGGTGTTCTGTGTAATGGCAGAGTGAGG
TGTCCGTGGCACGGAGCGTGTTTTAACGCCAAGACTGGAGACATTGAAGA
CTTCCCTGGGCTGGACAGTCTACCCAAGTTTGAGGTTAG Coding sequence (CDS) from alignment at Sc0000196:232996..234684+ >transcript:BL85375_cuf3 ID=transcript:BL85375_cuf3|Name=transcript:BL85375_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1512bp|location=Sequence derived from alignment at Sc0000196:232996..234684+ (Branchiostoma lanceolatum)
ACTGATCAGCACGTCTATGTTATAACAACTGACATCTCAGGTAAGCAGGG
AGGTACCAACTCTTCTGAAGGGGGAGCCAAGCCCCTCCCTCCCCCAGATG
TGGGCAAGCCCATTGAGGTGAAGGTGTGCAAGGTTTCTGACATGCAGGAT
GGAGAGATGCGAGAAGTAGATGTTGGGGGAGGGAAAGCACTACTCATCAA
GGAGGATGGAGAATTCAGTGCTCTTGGGCACAAATGTACCCACTATGGAG
CACCCTTGGTCAAAGGTGTTCTGTGTAATGGCAGAGTGAGGTGTCCGTGG
CACGGAGCGTGTTTTAACGCCAAGACTGGAGACATTGAAGACTTCCCTGG
GCTGGACAGTCTACCCAAGTTTGAGGTTACTGATCAGCACGTCTATGTTA
TAACAACTGACATCTCAGGTAAGCAGGGAGGTACCAACTCTTCTGAAGGG
GGAGCCAAGCCCCTCCCTCCCCCAGATGTGGGCAAGCCCATTGAGGTGAA
GGTGTGCAAGGTTTCTGACATGCAGGATGGAGAGATGCGAGAAGTAGATG
TTGGGGGAGGGAAAGCACTACTCATCAAGGAGGATGGAGAATTCAGTGCT
CTTGGGCACAAATGTACCCACTATGGAGCACCCTTGGTCAAAGGTGTTCT
GTGTAATGGCAGAGTGAGGTGTCCGTGGCACGGAGCGTGTTTTAACGCCA
AGACTGGAGACATTGAAGACTTCCCTGGGCTGGACAGTCTACCCAAGTTT
GAGGTTACTGATCAGCACGTCTATGTTATAACAACTGACATCTCAGGTAA
GCAGGGAGGTACCAACTCTTCTGAAGGGGGAGCCAAGCCCCTCCCTCCCC
CAGATGTGGGCAAGCCCATTGAGGTGAAGGTGTGCAAGGTTTCTGACATG
CAGGATGGAGAGATGCGAGAAGTAGATGTTGGGGGAGGGAAAGCACTACT
CATCAAGGAGGATGGAGAATTCAGTGCTCTTGGGCACAAATGTACCCACT
ATGGAGCACCCTTGGTCAAAGGTGTTCTGTGTAATGGCAGAGTGAGGTGT
CCGTGGCACGGAGCGTGTTTTAACGCCAAGACTGGAGACATTGAAGACTT
CCCTGGGCTGGACAGTCTACCCAAGTTTGAGGTTACTGATCAGCACGTCT
ATGTTATAACAACTGACATCTCAGGTAAGCAGGGAGGTACCAACTCTTCT
GAAGGGGGAGCCAAGCCCCTCCCTCCCCCAGATGTGGGCAAGCCCATTGA
GGTGAAGGTGTGCAAGGTTTCTGACATGCAGGATGGAGAGATGCGAGAAG
TAGATGTTGGGGGAGGGAAAGCACTACTCATCAAGGAGGATGGAGAATTC
AGTGCTCTTGGGCACAAATGTACCCACTATGGAGCACCCTTGGTCAAAGG
TGTTCTGTGTAATGGCAGAGTGAGGTGTCCGTGGCACGGAGCGTGTTTTA
ACGCCAAGACTGGAGACATTGAAGACTTCCCTGGGCTGGACAGTCTACCC
AAGTTTGAGGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000196 | genome | Sc0000196:232996..234684 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85375_cuf3 |
| Biotype | protein_coding |
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