transcript:BL85037_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL85037_cuf0
Unique Nametranscript:BL85037_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL85037_cuf0

>transcript:BL85037_cuf0-protein ID=transcript:BL85037_cuf0-protein|Name=transcript:BL85037_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=120bp
IKANVIYKLKCEEPNCNNMYIGETSRPLKERYKEHCRKSANRYSSAIYHH
LKHNQGHSFNLESTDILDREERWFERGIREAIYERMYNPALNRKGGLRVE
ISGTWDNVLPTAPHPRTNNI
Run BLAST on NCBI

mRNA from alignment at Sc0000346:256433..257049-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL85037_cuf0 ID=transcript:BL85037_cuf0|Name=transcript:BL85037_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=617bp|location=Sequence derived from alignment at Sc0000346:256433..257049- (Branchiostoma lanceolatum)
GCATCAAAGCCAATGTCATCTACAAACTGAAATGTGAGGAACCGAACTGC
AATAACATGTACATTGGGGAGACAAGTCGACCACTAAAAGAAAGGTACAA
GGAACATTGCAGAAAGAGCGCTAACCGCTACTCCTCTGCCATTTACCACC
ATCTAAAACACAACCAGGGACACTCATTCAATCTCGAATCCACGGACATC
CTAGATCGTGAAGAACGCTGGTTCGAACGGGGAATTAGAGAAGCAATATA
TGAGAGGATGTACAACCCCGCCCTCAACAGGAAAGGGGGTCTACGCGTTG
AAATTTCAGGCACTTGGGATAATGTGCTGCCCACAGCCCCCCACCCCCGG
ACGAACAACATTTAGTTACTGTACTAAAATCAACAGTAGCTAATTGAACT
ATTGGCACAAAACTTTGTCTTGAATTAATCTTCTTTTAAAGACTACTTCA
AGACATCCTAAATTGTCTTAACCTCATTAACATACCTATTCAGAGTTTTG
GTATAAAACTGGTGTTCTCAGTCCTATCGTTAGTCACTGACGAAAGACAG
TGGATGCTGTCTGAAACGTCTGACTGTTTCAAAACTTTATCCAGTTGCTT
GAGTAATTATTTTTGGC

Coding sequence (CDS) from alignment at Sc0000346:256433..257049-

>transcript:BL85037_cuf0 ID=transcript:BL85037_cuf0|Name=transcript:BL85037_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=363bp|location=Sequence derived from alignment at Sc0000346:256433..257049- (Branchiostoma lanceolatum)
ATCAAAGCCAATGTCATCTACAAACTGAAATGTGAGGAACCGAACTGCAA
TAACATGTACATTGGGGAGACAAGTCGACCACTAAAAGAAAGGTACAAGG
AACATTGCAGAAAGAGCGCTAACCGCTACTCCTCTGCCATTTACCACCAT
CTAAAACACAACCAGGGACACTCATTCAATCTCGAATCCACGGACATCCT
AGATCGTGAAGAACGCTGGTTCGAACGGGGAATTAGAGAAGCAATATATG
AGAGGATGTACAACCCCGCCCTCAACAGGAAAGGGGGTCTACGCGTTGAA
ATTTCAGGCACTTGGGATAATGTGCTGCCCACAGCCCCCCACCCCCGGAC
GAACAACATTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL85037gene:BL85037Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL85037_cuf0-E1BL85037_cuf0-E1-1564476830-444153Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL85037_cuf0transcript:BL85037_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000346genomeSc0000346:256433..257049 -
Properties
Property NameValue
Transcript idBL85037_cuf0
Biotypeprotein_coding