|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85007_cuf0 >transcript:BL85007_cuf0-protein ID=transcript:BL85007_cuf0-protein|Name=transcript:BL85007_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=242bp
HNQVTHNPVLTIIDPTDTPTEIESVSFEEEFSLPRTGPTEEPLESERSQD
TDERLKAQPETPTETYIHEPGEALPRDLRIGSTQDATEEESVKEPPATDI
DQEEDVKETCEMEHTNVMTRSTEASAETDSGSVIVEHPEATSSPTGRCSA
LSSTDTHRAAWTESTEGPTGGNSDQSTEDPTTARLSQTGRPRGRLSSVTN
PVFPVPDQWGPLHQDTEIPNDNQLASVEQGARVQDDLTEEDL Run BLAST on NCBI mRNA from alignment at Sc0000002:5716871..5717974+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85007_cuf0 ID=transcript:BL85007_cuf0|Name=transcript:BL85007_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1104bp|location=Sequence derived from alignment at Sc0000002:5716871..5717974+ (Branchiostoma lanceolatum)
CACAATCAAGTGACACATAACCCCGTCTTAACCATAATAGACCCAACAGA
CACTCCGACAGAGATAGAGTCAGTGTCATTTGAGGAGGAATTCTCTCTAC
CAAGGACAGGCCCAACAGAAGAGCCACTAGAGAGCGAACGCAGCCAGGAT
ACTGACGAACGCCTTAAAGCACAACCAGAGACACCGACAGAGACTTACAT
TCATGAGCCAGGAGAGGCACTACCCAGAGACCTGAGGATAGGATCAACGC
AAGACGCAACTGAAGAAGAGTCTGTCAAGGAACCGCCAGCCACTGATATT
GATCAAGAAGAAGACGTAAAAGAGACTTGTGAGATGGAACATACAAACGT
AATGACTCGTTCAACGGAGGCATCTGCAGAAACCGACAGCGGTTCAGTCA
TAGTGGAGCATCCAGAAGCAACATCAAGCCCTACTGGAAGATGTAGCGCC
CTGTCTTCAACAGACACACACCGGGCAGCTTGGACTGAGTCAACAGAAGG
ACCAACAGGGGGAAACAGCGATCAGTCTACAGAAGATCCTACAACAGCCA
GGCTGAGCCAAACAGGGAGGCCCAGAGGACGACTATCTTCTGTGACAAAC
CCTGTATTTCCAGTACCAGATCAGTGGGGACCGCTTCACCAAGATACTGA
AATACCAAATGACAATCAGCTGGCTAGTGTAGAACAAGGCGCGCGAGTAC
AGGACGATCTGACAGAGGAGGATCTGTAGAAATGATAAAATAGTTCATCG
ACTCTTTATTTTGGCATTTTAGGACACATTGCAAACTACTGAAAATTTCA
ACTGTTGACTTTATCCTTGAGAACATTGATAACCCGTCTTTGAAATTATT
TTTCGTTGTTGCTGTGTTTTATCCCTTGAGCATGTATATACTTTATGTGT
GAAGACAAAAGCCACTATGTGGCTGCCTTGTATTTATCATTTTTATGTTG
TAACACTGCTAACATTCTGTTGTAGAATATACAAGTAGGCAATGTATTTT
TTACGAAGGTTTAACATCACATCCCTCATAATAAATTTACATTAAATGGA
GATGTATGCCTTCAAATCTGAATATCATTTCAAGCCAAGTTGTTTTGACG
TCTG Coding sequence (CDS) from alignment at Sc0000002:5716871..5717974+ >transcript:BL85007_cuf0 ID=transcript:BL85007_cuf0|Name=transcript:BL85007_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=729bp|location=Sequence derived from alignment at Sc0000002:5716871..5717974+ (Branchiostoma lanceolatum)
CACAATCAAGTGACACATAACCCCGTCTTAACCATAATAGACCCAACAGA
CACTCCGACAGAGATAGAGTCAGTGTCATTTGAGGAGGAATTCTCTCTAC
CAAGGACAGGCCCAACAGAAGAGCCACTAGAGAGCGAACGCAGCCAGGAT
ACTGACGAACGCCTTAAAGCACAACCAGAGACACCGACAGAGACTTACAT
TCATGAGCCAGGAGAGGCACTACCCAGAGACCTGAGGATAGGATCAACGC
AAGACGCAACTGAAGAAGAGTCTGTCAAGGAACCGCCAGCCACTGATATT
GATCAAGAAGAAGACGTAAAAGAGACTTGTGAGATGGAACATACAAACGT
AATGACTCGTTCAACGGAGGCATCTGCAGAAACCGACAGCGGTTCAGTCA
TAGTGGAGCATCCAGAAGCAACATCAAGCCCTACTGGAAGATGTAGCGCC
CTGTCTTCAACAGACACACACCGGGCAGCTTGGACTGAGTCAACAGAAGG
ACCAACAGGGGGAAACAGCGATCAGTCTACAGAAGATCCTACAACAGCCA
GGCTGAGCCAAACAGGGAGGCCCAGAGGACGACTATCTTCTGTGACAAAC
CCTGTATTTCCAGTACCAGATCAGTGGGGACCGCTTCACCAAGATACTGA
AATACCAAATGACAATCAGCTGGCTAGTGTAGAACAAGGCGCGCGAGTAC
AGGACGATCTGACAGAGGAGGATCTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:5716871..5717974 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85007_cuf0 |
| Biotype | protein_coding |
|
