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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84934_cuf1 >transcript:BL84934_cuf1-protein ID=transcript:BL84934_cuf1-protein|Name=transcript:BL84934_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=246bp
MARRPLYDVLFLYVATFCVVLPILCHRLHYSIYYSQSLHMGRTGPFAYAM
KVNEERKTLAQTSLLSRPTWPPHSLADADSEAQLAIGFVTVNRQVQMRDG
SLYNPGYILQTVAAVLRENLSKETRLVVCDVDLDPSSHADAAFLSSYVPV
RSKYLKQTIETPSTLQDTFKKEKEDYIYCLKETLSFNPKFILMLQDDALA
TPGALDTLHHIIQTKIEKKYRARFRADRKQLHQNILQTVYSDIYAK Run BLAST on NCBI mRNA from alignment at Sc0000379:121789..124191- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84934_cuf1 ID=transcript:BL84934_cuf1|Name=transcript:BL84934_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2403bp|location=Sequence derived from alignment at Sc0000379:121789..124191- (Branchiostoma lanceolatum)
CCCCCCCTTTGACAAATGGTATCTACGCTAAAGGTCATGTTTTCTTTTAT
TGCATAAGAGCCCCACTGAGTGGAACGCGTGCATCATGTGCACCTGGTTG
TGGTAGAGGTTAGTGCTATTGTTACCGTCTAAATCTGCATGTCGCTATGA
CTTCTTTGCCGGGTGAAATTCTACAACTTTTCCTTGTTGACATTGAGTTT
GTTCTGCGTCGAGGTTGACCGGCCCTCACCGGAAATACGATCTTCGTCTG
CCGTTAAACAATCTCCGTGCTGCATCGCTGTGCTATGGCCAGGCGTCCTT
TGTATGACGTGTTGTTCCTGTACGTCGCGACGTTCTGTGTCGTCCTACCC
ATCCTCTGTCACAGACTGCACTACTCCATCTACTACAGTCAATCCCTACA
CATGGGAAGGACGGGTCCCTTCGCGTACGCAATGAAGGTGAACGAAGAAC
GTAAGACCCTGGCGCAAACGTCACTCCTCTCGCGACCAACATGGCCGCCT
CACAGCTTAGCTGATGCAGACTCCGAAGCGCAGCTTGCCATTGGGTTTGT
CACCGTCAACAGGCAAGTCCAAATGCGGGACGGATCTCTCTACAACCCGG
GGTATATTCTACAGACTGTCGCTGCGGTTCTTCGGGAAAATCTGTCAAAA
GAGACTCGGCTCGTTGTTTGTGACGTAGACCTGGACCCATCCTCTCATGC
CGATGCTGCTTTTCTGTCGTCATATGTTCCAGTTCGCTCCAAATATCTGA
AACAGACCATTGAGACGCCGTCAACGTTGCAAGACACTTTCAAGAAAGAA
AAAGAAGACTACATCTACTGTTTGAAAGAAACGCTTTCTTTTAATCCGAA
GTTTATTCTTATGTTACAAGACGACGCGCTGGCAACTCCCGGGGCATTAG
ATACTCTTCATCACATCATTCAGACAAAGATTGAAAAGAAGTACCGAGCT
AGGTTTCGAGCTGATAGAAAACAACTACACCAAAACATTCTTCAAACTGT
TTACTCCGACATATATGCAAAATGACTTTCATAACACAAAACCAAAACGT
ATCTTTGTACATATTCTTGAACTCGTTGGAATTGGCATCGTAGGAGGAAC
ACTTTGTACTCTTGTTCATTCGCTATTTTTCAACAAGGTNTCTGATCTTG
TTCATTCGCTATTTTTCAAGAAGGTGTCAAAATCCTATGCTAAAGTTTAC
ACCTTCTGTCTGGCAAGTGTCGTCTGTTGCGGACTTGCAGCCTGGGCAGT
TTCCAGAGTGCATATTATGGAGTGGAGGAGAATTTCTAAGCACTTCTACG
TCATGTTTCAGGCCGACCACTGTTGTATGCCCGCCATGTTGTACCGGAAG
GACACAGCAGTGGGGTTCGTGAATTACCTAGAGACCACGAGGAATAACAC
TTCTCCTATAGACATGGACATGAATGATCTTGTAGAGTCCCATGCTATAT
GGTTACAGGAGGTTTGCCGTCGAGCCAAATCTGTTCTCACATATAGGGAT
GTACTCCTCCATACAGAAGAAGATAAATAGAGGATTTCAGCATGGTTTTG
TATAAAGAGCAATTGAAGATAATGGTAAGAATCATGAAAGCCTCGTGTTT
AAGTAGATCTTTTTTCTAATTTTCTAAATTTATTGTAAACTCATCTTAAA
GTGTCAACCTTTAGACATGTGTGGTTACACTAACGCTTTTGACGTGCAAT
GTGTCGCTGTTATATATATTCTAAGATATCTACCTACCTAGTCCCTTGAC
CTCCGGGTCGTTGGGGGGAAATATCAACTCTGTGTTAAACTCCCAGCGCA
CGTGTTTATACCTTCTTTTTGGTATCTCTTGGGAACTGAGAAAAGACTTA
CTTTACCTAATGCAACTGAAATCTGAAAATGCACAAATAAATTTTCAACA
TATGTTTACCTTTAGGGTGAATGACGTGAAATTTGATCATGGTTGTCGGT
TGCTTAGTTCAAATTCCCATTGTTGTGGCGTTCTCGTGCTACAAACGCCC
GTGGCTAACTTCCGTCTCGTAGACGGTGCACTTTAGGTGTATCAGCACGC
CCCATATGTCAACACTGTGATGTTTCGTGGCGCAGAGGGTTAGGATTTTA
GGACCTTGTAGCATTAGGCATTTTGACCCTGGTTCGAACCCGAGCTGGTC
CATTTCCTTATTGCTTTTGACCTTTTCTGGAAGTGCAGGGGCGTTTTTGT
TGGTATGGTGGAATCGGCATAAGTCATGTTGGTATGGACCAAGTTTTCTA
AGGTTGTAGGTTCCTTTGCTGAAGATGCACATACTGAGATAGCAATGATA
TTGGGTTAGACCTAATTTGCATAATGTATTAGGGAAATCTTTACGAGTCT
TCACCACAACATACAGTTGAAACTTTCTGTGTCCTAGCTACTTTCTAAGG
AAC Coding sequence (CDS) from alignment at Sc0000379:121789..124191- >transcript:BL84934_cuf1 ID=transcript:BL84934_cuf1|Name=transcript:BL84934_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=741bp|location=Sequence derived from alignment at Sc0000379:121789..124191- (Branchiostoma lanceolatum)
ATGGCCAGGCGTCCTTTGTATGACGTGTTGTTCCTGTACGTCGCGACGTT
CTGTGTCGTCCTACCCATCCTCTGTCACAGACTGCACTACTCCATCTACT
ACAGTCAATCCCTACACATGGGAAGGACGGGTCCCTTCGCGTACGCAATG
AAGGTGAACGAAGAACGTAAGACCCTGGCGCAAACGTCACTCCTCTCGCG
ACCAACATGGCCGCCTCACAGCTTAGCTGATGCAGACTCCGAAGCGCAGC
TTGCCATTGGGTTTGTCACCGTCAACAGGCAAGTCCAAATGCGGGACGGA
TCTCTCTACAACCCGGGGTATATTCTACAGACTGTCGCTGCGGTTCTTCG
GGAAAATCTGTCAAAAGAGACTCGGCTCGTTGTTTGTGACGTAGACCTGG
ACCCATCCTCTCATGCCGATGCTGCTTTTCTGTCGTCATATGTTCCAGTT
CGCTCCAAATATCTGAAACAGACCATTGAGACGCCGTCAACGTTGCAAGA
CACTTTCAAGAAAGAAAAAGAAGACTACATCTACTGTTTGAAAGAAACGC
TTTCTTTTAATCCGAAGTTTATTCTTATGTTACAAGACGACGCGCTGGCA
ACTCCCGGGGCATTAGATACTCTTCATCACATCATTCAGACAAAGATTGA
AAAGAAGTACCGAGCTAGGTTTCGAGCTGATAGAAAACAACTACACCAAA
ACATTCTTCAAACTGTTTACTCCGACATATATGCAAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000379 | genome | Sc0000379:121789..124191 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL84934_cuf1 |
| Biotype | protein_coding |
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