transcript:BL84894_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL84894_cuf0
Unique Nametranscript:BL84894_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL84894_cuf0

>transcript:BL84894_cuf0-protein ID=transcript:BL84894_cuf0-protein|Name=transcript:BL84894_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=101bp
ISASYELTQTWRLGRAMCDIWTILDVTCCTASIMSLCIIALDRYWAITDA
VKYVHKRTPKRMMVMIGVVWLLSLCISIPPVFGWRKPEDTADPNNCLISQ
V
Run BLAST on NCBI

mRNA from alignment at xfSc0015083:194..883-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL84894_cuf0 ID=transcript:BL84894_cuf0|Name=transcript:BL84894_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=690bp|location=Sequence derived from alignment at xfSc0015083:194..883- (Branchiostoma lanceolatum)
ATCAGCGCATCGTACGAGCTGACACAAACATGGCGGCTGGGCCGCGCCAT GTGCGACATCTGGACCATCCTTGACGTCACCTGCTGCACGGCCTCTATCA TGTCTCTCTGCATCATCGCTCTGGACCGGTACTGGGCCATCACAGACGCG GTCAAGGTGAGGCCATGTTTCTGTTTCGTGTCGAAATGATCCATCAACTT CATGTGTCCAGGGTTCTGACGTAAGATTTAAAATGCTATATAGCCACTAC AGAACCGGCCTACCTATTAAACATGGGCTATTGGTAAAGAACGCGATTAC AGCAGAACAATCAATAACAGCCGTCAGGTATCAAAGTGTGTGTACCTCAA GGTACCCTTTTTGGACCACTTCTGCTTCTACGAGTAGTTCATTATCCGAC CAATCTTATTCAGCAGAGAAAAAGTCCTGTCAAGACTGAGTCTGTATTCA TTTGGGATTTTTTCTTTGTTCATTTTATTCGTACACTCTTTAGAGTGAGA TATTCATTTTTACCAACTCCTTTCTGAACTTTTTGTTCCCCAGTACGTTC ACAAACGCACGCCGAAGCGGATGATGGTGATGATCGGCGTGGTGTGGCTG CTGTCCCTCTGCATCTCCATTCCGCCGGTGTTCGGGTGGAGGAAACCCGA AGACACAGCTGACCCGAACAACTGTCTCATATCTCAGGTA

Coding sequence (CDS) from alignment at xfSc0015083:194..883-

>transcript:BL84894_cuf0 ID=transcript:BL84894_cuf0|Name=transcript:BL84894_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=606bp|location=Sequence derived from alignment at xfSc0015083:194..883- (Branchiostoma lanceolatum)
ATCAGCGCATCGTACGAGCTGACACAAACATGGCGGCTGGGCCGCGCCAT
GTGCGACATCTGGACCATCCTTGACGTCACCTGCTGCACGGCCTCTATCA
TGTCTCTCTGCATCATCGCTCTGGACCGGTACTGGGCCATCACAGACGCG
GTCAAGTACGTTCACAAACGCACGCCGAAGCGGATGATGGTGATGATCGG
CGTGGTGTGGCTGCTGTCCCTCTGCATCTCCATTCCGCCGGTGTTCGGGT
GGAGGAAACCCGAAGACACAGCTGACCCGAACAACTGTCTCATATCTCAG
GTAATCAGCGCATCGTACGAGCTGACACAAACATGGCGGCTGGGCCGCGC
CATGTGCGACATCTGGACCATCCTTGACGTCACCTGCTGCACGGCCTCTA
TCATGTCTCTCTGCATCATCGCTCTGGACCGGTACTGGGCCATCACAGAC
GCGGTCAAGTACGTTCACAAACGCACGCCGAAGCGGATGATGGTGATGAT
CGGCGTGGTGTGGCTGCTGTCCCTCTGCATCTCCATTCCGCCGGTGTTCG
GGTGGAGGAAACCCGAAGACACAGCTGACCCGAACAACTGTCTCATATCT
CAGGTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL84894gene:BL84894Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL84894_cuf0-E1BL84894_cuf0-E1-1564476830-543626Branchiostoma lanceolatumexon
BL84894_cuf0-E2BL84894_cuf0-E2-1564476830-543624Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL84894_cuf0transcript:BL84894_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0015083genomexfSc0015083:194..883 -
Properties
Property NameValue
Transcript idBL84894_cuf0
Biotypeprotein_coding