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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84777_cuf0 >transcript:BL84777_cuf0-protein ID=transcript:BL84777_cuf0-protein|Name=transcript:BL84777_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=258bp
MGKVTLINTLIVSQFIYLLSSLPSPPPDFFVKYEKKIFRFLWGGGPERVS
RKSIYSAYEQGGLKLRNLRSVDLTLKASWIPKLQLNREWFCSKFLFMSCS
WLRTSLFPFVQLSVRDFDNFMGKNPPITSFFRQVIQYWLRFQLRPPEGVD
EVKQQLLCLNSNICIGQKPFFSTAFDTGGVRFLNDILDLENRFLSYENFI
LKFGDMCTKLQYNQLISAIPAHWKALLKKASHILQVCMPICRDITWLRKK
PINKHLYL Run BLAST on NCBI mRNA from alignment at Sc0000365:62142..63480- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84777_cuf0 ID=transcript:BL84777_cuf0|Name=transcript:BL84777_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1339bp|location=Sequence derived from alignment at Sc0000365:62142..63480- (Branchiostoma lanceolatum)
GGAGTTCGCCAAGGCTGTCCTCTTTCACCTTATTTGTTTATTTTAGGAGT
AGAACTTTTAGCTAATAAGATAAGAAATAATATTGGAATAGAAGGATTAA
CTACGTATGGTATAGAGTCTAAAATCTCTCAATATGCCGATGATTCTAAT
TTCCCCCTGGCCCCGAAACTTGGTTCCCTCTACTCATTAGTTAAAGATTT
AGAAGATTACTCTTTATTATCTGGTTTAATTCCAAATTTCGATAAATGTA
AAATAAAACGTATAGGTTCTTTAAAGGGTACACATTTCTATCTTCCTTGT
CCCTTGCCAATTCAATGGACAGACGGCCCCATCGACCTTTTGGGAATTCA
TATTCCTGTACAATTTTCGGATATAATTAGTATAAACTTTGATAGGAAAT
TTACTAAGATCGNCCTTGCCAATTCAATGGACAGACGGCCCCATCGACCT
TTTGGGAATTCATATTCCTGTACAATTTTCGGATATAATTAGTATAAACT
TTGATAGGAAATTCACTAAGATCGATAAACTTTTATTTCCTTGGAAGACA
AAGACTTTAACACTCATGGGTAAAGTTACTTTAATAAACACACTTATTGT
ATCACAATTTATATATTTACTTAGCTCGCTTCCGTCCCCACCGCCTGATT
TTTTTGTCAAATATGAAAAGAAAATATTTCGATTTCTATGGGGAGGTGGG
CCGGAGCGAGTTAGTAGAAAGTCTATTTACAGTGCTTATGAACAGGGGGG
ACTGAAGCTAAGAAACTTGCGGTCTGTCGATCTCACCCTAAAAGCCTCTT
GGATTCCTAAGCTACAGTTAAACAGAGAATGGTTCTGTTCCAAGTTTTTA
TTTATGTCTTGTTCATGGTTACGGACTTCCTTGTTCCCCTTTGTACAACT
TTCTGTCCGTGATTTTGATAATTTTATGGGTAAGAATCCGCCAATAACTT
CCTTTTTCAGACAGGTCATACAATATTGGTTGCGCTTCCAACTCCGACCC
CCAGAGGGTGTGGACGAGGTCAAACAACAGCTTCTCTGTTTGAACTCGAA
TATATGTATTGGTCAAAAACCATTCTTTTCCACAGCTTTTGATACTGGGG
GTGTTCGATTTCTTAATGATATATTGGATTTAGAAAATAGATTTCTTTCT
TATGAAAATTTCATTCTAAAATTTGGGGATATGTGTACAAAATTACAATA
CAATCAGTTAATTTCTGCTATACCAGCTCACTGGAAAGCATTACTAAAGA
AAGCATCTCATATCTTACAAGTTTGCATGCCCATTTGTAGAGACATAACT
TGGCTTAGAAAAAAGCCCATCAATAAACATTTATACCTT Coding sequence (CDS) from alignment at Sc0000365:62142..63480- >transcript:BL84777_cuf0 ID=transcript:BL84777_cuf0|Name=transcript:BL84777_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=774bp|location=Sequence derived from alignment at Sc0000365:62142..63480- (Branchiostoma lanceolatum)
ATGGGTAAAGTTACTTTAATAAACACACTTATTGTATCACAATTTATATA
TTTACTTAGCTCGCTTCCGTCCCCACCGCCTGATTTTTTTGTCAAATATG
AAAAGAAAATATTTCGATTTCTATGGGGAGGTGGGCCGGAGCGAGTTAGT
AGAAAGTCTATTTACAGTGCTTATGAACAGGGGGGACTGAAGCTAAGAAA
CTTGCGGTCTGTCGATCTCACCCTAAAAGCCTCTTGGATTCCTAAGCTAC
AGTTAAACAGAGAATGGTTCTGTTCCAAGTTTTTATTTATGTCTTGTTCA
TGGTTACGGACTTCCTTGTTCCCCTTTGTACAACTTTCTGTCCGTGATTT
TGATAATTTTATGGGTAAGAATCCGCCAATAACTTCCTTTTTCAGACAGG
TCATACAATATTGGTTGCGCTTCCAACTCCGACCCCCAGAGGGTGTGGAC
GAGGTCAAACAACAGCTTCTCTGTTTGAACTCGAATATATGTATTGGTCA
AAAACCATTCTTTTCCACAGCTTTTGATACTGGGGGTGTTCGATTTCTTA
ATGATATATTGGATTTAGAAAATAGATTTCTTTCTTATGAAAATTTCATT
CTAAAATTTGGGGATATGTGTACAAAATTACAATACAATCAGTTAATTTC
TGCTATACCAGCTCACTGGAAAGCATTACTAAAGAAAGCATCTCATATCT
TACAAGTTTGCATGCCCATTTGTAGAGACATAACTTGGCTTAGAAAAAAG
CCCATCAATAAACATTTATACCTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000365 | genome | Sc0000365:62142..63480 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL84777_cuf0 |
| Biotype | protein_coding |
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