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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84578_cuf0 >transcript:BL84578_cuf0-protein ID=transcript:BL84578_cuf0-protein|Name=transcript:BL84578_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=161bp
MLVVRVRCVHVFVVRRYSSFGEIWVALKRAGVCRWSDPALAAEAVQGAAL
AFQSVDNVHGGHRLALGVLGVGHRVADHILKEHLQNASGLLVDQPGDALH
AATTGKTTDSRLSDTLDVVAKNLAVTLSASLSEPLASFAASRHDDYDVLV
DTKREWIRRPG Run BLAST on NCBI mRNA from alignment at Sc0000333:8710..10692- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84578_cuf0 ID=transcript:BL84578_cuf0|Name=transcript:BL84578_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1983bp|location=Sequence derived from alignment at Sc0000333:8710..10692- (Branchiostoma lanceolatum)
GGTCGGATCTTCACTTCTTCTTGGGCTTGGCCGCCTTCTTGGCAGGCGCT
GCCTTCTTGGCGGCCGGCTTCTTTTTTGGCGTCTTCTTGGCCGGTTTCTT
GGCGACTGGTTTCTTGGCCGGAGTTTTCTTGGTCTTCTTGGCGGCCGGCT
TCTTGGCCTTCTTGGGGGTGGTAGCCTTCTTGGCCGCGGGCTTTTTCGGC
TTGGCGGTCTTGGGCTTGGCGGCCTTCTTGGCCGCGGGTTTCTTGACCGG
CTTCTTGGCGGCAGGTTTCTTGGCGGCCTTCTCGGCGGCTTTCTTGGCTG
CCACGTTGATTTTGAAGGATCCCGACGCCCCCGTACCTTTCACCTGAATG
AGGGTGCCCTTCTCTACCAAGGCTTTCAGGGCGCGCTTGATGAAGTGTCC
CTTCTTCTCCACGTCGAACTTGTAGTTGCCGGCGATGTACTTCTTGATGG
CCAAGAGGGAAGAACCTTTGCGGTCCTTGAGCGCTTCCAGGGCCGCCGTG
ACCATGGCGGTGGTGGGCGGGTGAGCCGCAGGGGCCTTGGGCGCCTTCTT
GGCCTTCTTTGGGGACGATGCTGGGGCGGACATGTTAGCTTGCTTTGTCT
GCGACGGACGTGCAAATGAACCCGACATCTTGTCAAACTGGCGTGAAGTA
GCGACGGTGCGGACGTGGTCGGAAACGTCGTAGCCTGTCCGCGTCTTACT
GTCTGTCTCGGCCAAATTTGTGTTTCTTTTCTAACTTTACGGTTGAATTT
CTCCCTTCCCGAGTATCAAAATTGATACTGACTCGGTTTCTGTACAAGAG
GACATGTCCAACTTACTCATTTGATGGAAGCGGCTGGTCGCTAGCCCTCA
GATATTGAGATATTTGCCATACTTTTCAGTAAGCACGCCCTGGACTCCAC
GCCGACGGCTGATCGAGTTTGCATGCAGAGAAACGAGCGAGCGCACATGA
ATTGATGAACACGACCGGACTTTTGTTGACGCAGATATATCATATTTGAG
CCAAGCAACTTCACTACACGTGAACGAGCAGAGATCGACAAGATAATAGA
TCATAAGTAACTTTGATACATAACACACACTCCCAAACACGCCACTTCAA
TCATATTCTTCACACGTATACCAAGAAAATAAAACATATATACTACGCTT
CACACGCATTTATTAGTATCCAACCGTGCACACATCTTTGCAGAACATCT
CTCAACAAGACTATCACTAGCACTACAAAGAAAACCGTGGGGACCACCAT
ACTAGTTCATTGTTGTGTGTTTGCATGACCGGCTTGGGTCTGTATTTGGT
ATTATGCTCGTTGTTCGAGTCAGGTGTGTACATGTGTTCGTTGTGAGAAG
ATACAGCTCTTTTGGGGAGATTTGGGTGGCCCTGAAAAGGGCCGGGGTTT
GTCGATGGTCAGATCCTGCTTTAGCCGCCGAAGCCGTACAGGGTGCGGCC
TTGGCGTTTCAGAGCGTAGACAACGTCCATGGCGGTCACCGTCTTGCGCT
TGGCGTGCTCGGTGTAGGTCACCGCGTCGCGGATCACATTCTCAAGGAAC
ACCTTCAGAACGCCTCGGGTCTCCTCGTAGATCAACCCGGAGATGCGCTT
CACGCCGCCACGACGGGCAAGACGACGGATAGCCGGCTTAGTGATACCCT
GGATGTTGTCGCGAAGAACCTTGCGGTGACGCTTAGCGCCTCCCTTTCCG
AGCCCCTTGCCTCCTTTGCCGCGTCCAGACATGATGATTACGATGTTCTT
GTCGATACAAAACGAGAATGGATTAGACGGCCTGGCTGAGCCGCATTAGT
AACCGCCCTGCGGACCTGCACGTAGTCCTGACCGCCGCCACCACTAGCCA
ATGGGAAGCAAGCCACTAGCCAAGCAAGACAATGCTACGCGGAGGATTTG
ACACCGACAAGACAAACATCTTGTCGGGAAAACACGAAAGCAGAAGAAAA
TAAAATAAAGCGAAGAAAACGGATGAATTTGCC Coding sequence (CDS) from alignment at Sc0000333:8710..10692- >transcript:BL84578_cuf0 ID=transcript:BL84578_cuf0|Name=transcript:BL84578_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=486bp|location=Sequence derived from alignment at Sc0000333:8710..10692- (Branchiostoma lanceolatum)
ATGCTCGTTGTTCGAGTCAGGTGTGTACATGTGTTCGTTGTGAGAAGATA
CAGCTCTTTTGGGGAGATTTGGGTGGCCCTGAAAAGGGCCGGGGTTTGTC
GATGGTCAGATCCTGCTTTAGCCGCCGAAGCCGTACAGGGTGCGGCCTTG
GCGTTTCAGAGCGTAGACAACGTCCATGGCGGTCACCGTCTTGCGCTTGG
CGTGCTCGGTGTAGGTCACCGCGTCGCGGATCACATTCTCAAGGAACACC
TTCAGAACGCCTCGGGTCTCCTCGTAGATCAACCCGGAGATGCGCTTCAC
GCCGCCACGACGGGCAAGACGACGGATAGCCGGCTTAGTGATACCCTGGA
TGTTGTCGCGAAGAACCTTGCGGTGACGCTTAGCGCCTCCCTTTCCGAGC
CCCTTGCCTCCTTTGCCGCGTCCAGACATGATGATTACGATGTTCTTGTC
GATACAAAACGAGAATGGATTAGACGGCCTGGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000333 | genome | Sc0000333:8710..10692 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL84578_cuf0 |
| Biotype | protein_coding |
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