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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84552_cuf0 >transcript:BL84552_cuf0-protein ID=transcript:BL84552_cuf0-protein|Name=transcript:BL84552_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=142bp
MMILVCVLQNRLLQCSPAQVPAMLNNKIFSVPTQLFKSLVWVAGDVLDRE
EYDYLKSSGQVYMSDEVSDEDDKSSVWVQPPAWRADKLTGITRRRQAVLD
QNRRDRRLPFSNKEIKQDEEFTDRCPPSSGLHSHTSRLWPHR Run BLAST on NCBI mRNA from alignment at Sc0000027:1624762..1626547- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84552_cuf0 ID=transcript:BL84552_cuf0|Name=transcript:BL84552_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1786bp|location=Sequence derived from alignment at Sc0000027:1624762..1626547- (Branchiostoma lanceolatum)
ATTTCCTACCAAGACTGGCTACATTTTGCCGGCTATATTTAGAATGGTAA
AGTAATATGTATCTTGTTTTTTTAATAACGCGGCGGTTTGTGTTAAAAAT
CCCCCTATGATGATATTGGTTTGTGTCCTTCAAAATCGTTTATTGCAGTG
TAGCCCTGCCCAGGTGCCCGCCATGCTTAATAACAAGATTTTTTCTGTAC
CCACTCAGCTGTTCAAGTCCCTAGTTTGGGTGGCAGGGGACGTCTTGGAC
AGAGAAGAATACGACTACCTGAAGTCATCAGGACAGGTTTACATGTCCGA
TGAAGTCAGCGATGAGGACGACAAGTCATCGGTGTGGGTCCAGCCACCCG
CCTGGCGGGCGGACAAGTTAACGGGCATAACGCGAAGGCGCCAGGCGGTC
CTAGACCAGAATAGGAGAGACAGGCGCCTGCCCTTCTCCAACAAAGAGAT
AAAACAAGATGAGGAGTTTACAGACAGATGTCCACCATCCAGCGGGCTGC
ACAGCCACACCTCAAGACTGTGGCCTCACAGGTAGAGGAAGGCGCGGAGG
TAGAGGAAGGCGCGGGGGGAGTGGAACACGTAGAGGGAGAAGAACGCACA
GAGGGAGAGGAAGACACGGAGGAAGAGGAAGACTGCGACTGAAGCTAGGA
GTTGTGATGATGACTGATGTGGCATACTTCATCATTAAAACGTCACATTC
CACTATTTACTTTCACTGCTTAGTAAGTTGACCCTATAGTACGTAGATAT
GACTTTTTGTATATCTTACAGTGTTGGCTTTAAAAGTTTGTTGTAGTCGG
TTTTTACTATCGTAGTTTAGCAAGTTGACCCGTAGTACGTAGATAAGCCT
TTTTTTGTATATCTCACAGTGTTGGCTTTAAATGTTTGTTGTAGTCGGTT
ACTCAAGCGAGTCTTTCACGACACAATGGGAACCAGTCCCTGAAGGTCGG
GGATCTCAGTCGAGAAAGTGCAAAGTTTCTGCATAGTTCCTCACGTCTTT
GTGATAGTGGTGTTAGTGAGAGTCCTCCAATACAACTTGCATTTGATGAT
ACTTCTGTTTTGCATTTGTGTATTGATTTGCCTAAGTCTTTGGTGTGGTA
CTTCTGTTATTCTTAGTTCGTGCAGTATATTCGTCTATGTGTAAAGAGTT
AGGAATTCAAAACATATTATACTGTATTAGGATCATTTTCTCTCCCAAAT
AGTCTGAAAATGTAACGCCTAATAGAGTTTCTGATAGGAGAAGTGTTACG
GTCCGATTCTCGGTTCCGAATATCCTTAGTTATATGTAAACTTTCCGGAG
CGTAACAGCCCTAACGCGCGGTCAGAAGTTAGGCCATTTTCTGAACGCAT
TTCGTCTTAAAAGAGTCCGAAACTGGAAGTCCGGATATTATGAAGAGGTC
TGTGGTCCCGTTCTTGACTACGGAAATCATCAGGAAACGTAAGGAAGTTG
AGTCGTGTTTATGTCCGGATTCATCGTCCGGATTTGCATTACCACTTCGG
ACGTATACGTAATTAAAAATACGTACCGGAAATCACCATCTATCGGACAT
TACGGTTGATTGCCGGGAATCCAGATATGAGGAGAAGCGTTACGATCCGA
TTCTTTGTTCGAATATCCTTAGTATATGTAACCTTTCCGGAGCGTAACAG
CTCCGAACGCGGTCAGAAAATATATCATATTCGGAACGTGTTTTGTCTCA
AATGACTCCAAAAATATCCCATAACTGGGAATCCGGATATGAGAAATAGT
ATTTTGTTCCCATTTTGGACTCCGAATATGTCCAGC Coding sequence (CDS) from alignment at Sc0000027:1624762..1626547- >transcript:BL84552_cuf0 ID=transcript:BL84552_cuf0|Name=transcript:BL84552_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=429bp|location=Sequence derived from alignment at Sc0000027:1624762..1626547- (Branchiostoma lanceolatum)
ATGATGATATTGGTTTGTGTCCTTCAAAATCGTTTATTGCAGTGTAGCCC
TGCCCAGGTGCCCGCCATGCTTAATAACAAGATTTTTTCTGTACCCACTC
AGCTGTTCAAGTCCCTAGTTTGGGTGGCAGGGGACGTCTTGGACAGAGAA
GAATACGACTACCTGAAGTCATCAGGACAGGTTTACATGTCCGATGAAGT
CAGCGATGAGGACGACAAGTCATCGGTGTGGGTCCAGCCACCCGCCTGGC
GGGCGGACAAGTTAACGGGCATAACGCGAAGGCGCCAGGCGGTCCTAGAC
CAGAATAGGAGAGACAGGCGCCTGCCCTTCTCCAACAAAGAGATAAAACA
AGATGAGGAGTTTACAGACAGATGTCCACCATCCAGCGGGCTGCACAGCC
ACACCTCAAGACTGTGGCCTCACAGGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000027 | genome | Sc0000027:1624762..1626547 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL84552_cuf0 |
| Biotype | protein_coding |
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