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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84323_cuf0 >transcript:BL84323_cuf0-protein ID=transcript:BL84323_cuf0-protein|Name=transcript:BL84323_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=171bp
MKSLNEWKAKQQIKDRVDKHELHIRGQKPAVEQVLGVRGEDLANEQVLEV
RGEDLANEQVFEVRVEDMANEQVLGVRGEEPVDEQPLLEVRVEDPAGRQE
LEVRGWEPVDEQELEVTVESRVGEFRFKPFTENDQLQLAGQLNLPVERYL
NIEQMDVPLDSKPPINPMGND Run BLAST on NCBI mRNA from alignment at Sc0000125:278322..281566+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84323_cuf0 ID=transcript:BL84323_cuf0|Name=transcript:BL84323_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3245bp|location=Sequence derived from alignment at Sc0000125:278322..281566+ (Branchiostoma lanceolatum)
CGTTCGCCCGCTGCAGACGACGGAATTTTCCATTCACGTGACAAGTGACC
GCAGGCAAGTGCTATACCATCGTTTTTGGAATAAACCCCCAATCCGAAGA
CACTTTTGGGCCTTACCCTGGAATTTGTTTACATTTTTAGTAAATAATGG
TTACCTTTTATTAAATAAAGAAATAAATAAAATATATTTCTTTTCGTGGT
CACATTTCGTATGTTACGTTTTGTTGTGTTCNGGTTACCTTTTATCAAAT
AAAGAAATAAATAAAATATATTTCTTTTCGTGGTCACATTTCGTATGTTA
CGTTTTTTTGTGTTCAAACTCAGCAAAGTTGGAAATTTCTATCGACCATA
TCTTCTGTTTGTCGGACTTTGTACGTTGTATATTAAATTAAAAGAACTCT
AGACTGGAGTAGAGTACACTAAGAGTAAAGTCTTCGGCCAACTACGCTCT
CCTCTAAAAACTAACTCAAGAACCAACGGTTCAGTAACATTGACTTCGTA
AGATAGCGGACAACTTGATCAGGTAAGAATTTGCTCGGCACTCTATGTTG
TTTACGTATCGTAGTTATAGCAGACATTTTATTTCTTTACATGCAAGACT
TTAGTCGCTATGAAATCGGTCTTCCGTATCATTTCTGTTTCATGATGGTT
TTAAACTGGAGATTTATTTTGTTTTCATGGTGACGTCTTCCTGTGTTCCT
CAGATTTTTGGGGGGGAGGGGGGCTACTTTGACAAACTGCCACACAAGCC
ACCACATTTTCAAGGACATAGAGAATGAACATGAAAATATTCTAAAATGC
ATAATTGTTGTGGATACATGTTCTTTGTGATGTTTAGTATGCAAGGAGCT
TAGTTGGAAACTAGAATTTTCGGAGAGGTTCTAAACTTTTACCATGTGTA
TACAGTGTATGCAGAATGTATATTCTGGTACTTTAATTTTTTTTAGCAGA
AATGCCAAGACGCAAGAGTAAAAAAAACAATGAAGAGTTTGAATGAGTGG
AAGGCAAAGCAGCAAATTAAGGATCGGGTTGACAAGCATGAATTACACAT
AAGAGGACAGAAACCGGCTGTTGAGCAGGTATTGGGGGTAAGAGGCGAGG
ATCTGGCCAACGAGCAGGTATTGGAGGTAAGAGGAGAGGATCTGGCCAAC
GAGCAGGTATTTGAGGTAAGAGTCGAGGATATGGCCAACGAGCAGGTATT
GGGGGTAAGAGGCGAGGAGCCAGTTGATGAGCAGCCATTACTAGAGGTAA
GAGTAGAGGACCCAGCTGGTAGGCAGGAATTAGAGGTAAGAGGATGGGAG
CCAGTTGATGAGCAGGAATTAGAGGTAACAGTTGAGTCGAGGGTTGGAGA
GTTTAGGTTCAAGCCCTTCACAGAAAATGATCAATTGCAACTTGCAGGTC
AGTTGAACCTTCCTGTTGAAAGATACCTCAATATTGAACAAATGGATGTC
CCCTTGGATTCCAAACCACCGATCAATCCCATGGGGAACGACTAAGGGTC
CCGCTCTGGCTCTTGCCAAAATGACCTGGCAAGGGGGAGCCTGGTGGGTG
CTCCATAACTGGGAGCCAGAGAATGATATTTATGCCAGCGTCCGCCCTTG
CCACCCGGTACATTTCGTGGTGGCAAGAGGGATGGGGAAGGACTAAGGGT
CCCGCACTGGCTCTTGCCAAAATGACCTGGCAAGGGGGAGCCTGGTAAGT
GGAAGCCTGTGAATGGCATATTTGTGCCAGCTTCCCACCTTGCCACCGGG
CACATTCAGTGGGGGATGGGAGCATTGGGAAGACCTGCTTAAGGGGGAGC
TTGGTGGATGTTCCAAGATTGGAAGCCTTGTAGATTAAGAATCATTCGTG
TCAATACTTTATTGTTACTGCCAATTTGTCATTTGCATTGATTTTGTTTT
TAGAGTGTTATAACAAATCTCAGGTCATTTGGCTTTATTTTCCTTATAGT
TTTTGTAAATGTTTTCATATTTCTGTCTTTGTCATATTTCGTATCATTTT
CCCATTGAAAACCATTTTGAGAGATGTCCAGTAATGTATGGAAGAATGAA
TGAAGTGTCTCTGTTTCTTTTCAGATGATAAGGGCCAGTTGAAAGATTAT
GCTCGTGGCACACAAAAGGTAGGGCCTGTTGTCTTCTGTCACTACACGTA
TATGTAGATGTAGAGACAGGTCTGGCATGGTCATCGAAAAGAAGATTATC
TCCAACACAACTAAATGTTAAGTAATGTTTTCTTCTGACAACAGACAATA
TGTACAGTTTCCAAATCAATGTAATTTTTTTATCATATTTTGCCCATACT
ATAAGTATGGTCAAAATATATTGTTGATGAATGTTTCTACTCTGCATTGT
GATGCTAAATCTTGCGCTCCTGTTTGTGTTCTCTAGGTGGGACCTCCTGT
AGAGAAGCAGAACCTGGTCCGCGATAAACCACATTTGGAGGAAGCAGACA
AATCTGGCCCCAGCCAGCCACACAAGATTGTAAGTAATTCTGGATTCATG
CATGTTTATTTGGACACATGAACAGATTCCATATCTGTCTATAGTTTTTT
ATCAGTGTTTCAGCTCTGTATTGAAATGCTAAATCTCACTCTTCTGTTTC
TATCCTCCAGACCCAATTAGAGAAGAGAAGCAGATCATGGTCCAAGTCAA
GTTAAAGTTTATTGCACAACAATTGTAACAGGTACAATGTAAGGCAAAAT
ACTGCTGGCTACTTGTTCTAATCTAGTACAAACTGCAGCAAGGTTCTAGA
CTATACAATGTTGTTAATGGTAGATAGTATCAGCTGGCTACTTACATTGT
ATACTGAATCTCCATATGAAAGTCTGCTTTTATTTTTGACTATGTTTCAA
GTTTCTTAAAGATTCTTGTTGTTTGCGGCCAGCTTGACAGAAAATCGCCC
TTAAGGCGCTCCTTGAATATGTTTCTGAAATATTTTGCATCGACTGTTCA
TTATCCATGAGAAACTGCCTGTTGAAGAAGCAGGCAGACCTGGCCCCTGC
CAGCCAGAAAAGGATATACTACTAATAGATTGCAGCCAATTCCGAAAACA
TGTATATTTTGACGTCATGAATATAGATTTTCTGCGATGTAATATTCAAT
ATTTACAGCTTACAAGATTTTTGTGCGTAAAGCTTTGACATGGAAATGAT
TCAACTCGCAGTATTCGTATCTACATAGAGGAGATAATAAGAGAATGGGA
GAAGACAAGTGTAAAGTTGCAATTTTGTGCTGAAGTAAAACTGTC Coding sequence (CDS) from alignment at Sc0000125:278322..281566+ >transcript:BL84323_cuf0 ID=transcript:BL84323_cuf0|Name=transcript:BL84323_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=516bp|location=Sequence derived from alignment at Sc0000125:278322..281566+ (Branchiostoma lanceolatum)
ATGAAGAGTTTGAATGAGTGGAAGGCAAAGCAGCAAATTAAGGATCGGGT
TGACAAGCATGAATTACACATAAGAGGACAGAAACCGGCTGTTGAGCAGG
TATTGGGGGTAAGAGGCGAGGATCTGGCCAACGAGCAGGTATTGGAGGTA
AGAGGAGAGGATCTGGCCAACGAGCAGGTATTTGAGGTAAGAGTCGAGGA
TATGGCCAACGAGCAGGTATTGGGGGTAAGAGGCGAGGAGCCAGTTGATG
AGCAGCCATTACTAGAGGTAAGAGTAGAGGACCCAGCTGGTAGGCAGGAA
TTAGAGGTAAGAGGATGGGAGCCAGTTGATGAGCAGGAATTAGAGGTAAC
AGTTGAGTCGAGGGTTGGAGAGTTTAGGTTCAAGCCCTTCACAGAAAATG
ATCAATTGCAACTTGCAGGTCAGTTGAACCTTCCTGTTGAAAGATACCTC
AATATTGAACAAATGGATGTCCCCTTGGATTCCAAACCACCGATCAATCC
CATGGGGAACGACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000125 | genome | Sc0000125:278322..281566 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL84323_cuf0 |
| Biotype | protein_coding |
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