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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL84154_cuf0 >transcript:BL84154_cuf0-protein ID=transcript:BL84154_cuf0-protein|Name=transcript:BL84154_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=190bp
LKTYKKLLVVRNPLERLVSAYLFFFGGKDYFVGKTRHVLYNKHYQDMLET
IDWKIPYTEDYGVIQTKDETYHVIPFLAFIRAVTEDTGRWKNEHWALMSN
YCPPCQVHFDFIAHTETLAKDLNIFFRNAGVTGRENVFPHVKTRLGKRKM
LDLYRQIPLKDIQRIGRKYAPDFDMFGYSLEETILQLLST Run BLAST on NCBI mRNA from alignment at Sc0000007:3168116..3170424- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL84154_cuf0 ID=transcript:BL84154_cuf0|Name=transcript:BL84154_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2309bp|location=Sequence derived from alignment at Sc0000007:3168116..3170424- (Branchiostoma lanceolatum)
CTGAAGACTTACAAGAAACTCCTGGTGGTGCGCAATCCACTCGAGAGGTA
CGTAAAAGTAATACTTGTGATTTTTTTTATCTTAACGATGTCTCGTTTCT
TTATTTCCGAAGTCAATCGACACGAGACTTGAGTCCGATTTTAGACCAGT
AGTCACAGCTACCAAATCCTGAAAAAAATCTGATGGAGCCAAACCATTAC
CGCCTAACAAGAATATGTGGAAATGTAATCTATCCATCCAAAGTTTTATT
ACCTTTGTTAAGTATATATACAAATTAGAGAAAAATATTGCAACATTTCG
GAACAAAATAGGTAAACACAATAAGAAATGGGAATCGTTATATCTTGTTT
TTAATTGATTGTGGCCACAAGTTACTCATTTGTCAGCGTATGTACAACTA
TATTCTTTTGTTTCATGTTTCTATATTGTATCTTTTGTTTATCTGAATAA
AGTTTGAAAAAAAATGTGGAAATTGACAACAAACGTATTTGTTTCATGAA
TCTTAGGCAACCATATAGATCTGTCTCATATTGTTTTTGTAGTAATATTT
CAACGAATACTGACAACACGTTTCGTATTGCCCTATCAATTTAGATTGGT
CTCGGCATACTTATTTTTCTTTGGAGGAAAAGACTACTTCGTTGGAAAAA
CGAGACACGTTCTTTACAACAAACATTATCAAGATATGCTGGAAACAATC
GACTGGAAGGTGGGGAATATTCTATTCATTGTTCTGCACGCATTGAAAGG
CTGAAAGAACATTATATGGGCAACATATGCATCATATTCCAGACGGCAAA
AGCTGATTTATATGATGACAGTAACAACATACATCAAGAGACATATACAT
TAAGAAGCAACATAATTCTTTAGATCTTAATATGCGTCCTCCCCTCTCAA
GTTCTCTGTTTATCACATTTGATATGTATGCAAATGTCAAATACAATTTA
TTCTATATCGAGGAAGTTGACAACGTATTTCAGTGACTTGTGTCCATTTA
CGATTCTAAAAGTATTGTTTAAAATGCTGTTCACACGACAAGGAAGCATA
TTCGTTTTGCTGAGTTGTTCGTAAAGTTATTTGAAATTCAATTTTATCAT
AAAAGATTTATATTATTCACGCTCGCTATCTTTGTATTGGTTTCTTTGTT
TTTACTGTTGCTGTTTAATGTCAAAACATTACGACTTTCCAGATTCCATA
CACCGAGGACTACGGCGTCATTCAAACTAAAGATGAAACGTACCATGTCA
TTCCATTTTTGGCCTTCATAAGAGCTGTAACGGAAGACACAGGTAGATGG
AAAAATGAACACTGGGCGCTGATGTCTAACTATTGCCCACCTTGTCAAGT
AAGTAACCGTTTGTTTGTATGTTTATTTATTTACTTGTTTGTTTGTTTGC
TAACTCGCTTGAGAGTTAATGCGCTCTCGAGTGTTTTAACAAGTTGAACA
TATATATGATTGTAAAATCCCATTGTCATCCCATACCACTATACCATATT
GTATAAGATAGACTGATTAGCCTAATAGAATGTTATCTATGTACCAGTGA
ATGCCATACTCTGTACCTTGTACAATTGTTGTGCAATAAGCCAATAAAGT
TACTTTATATGAGCTTTCAGTTTAAACAAAACTTTACTTTACTTTACTTG
GGTCATTCATTCATTCACTTACTTCCTTGGCAGATTGTACATGGAAGCGG
GTTATTTTCTATCGGGTCTTTGATGTAGACTGTAGTCTATGAGCGTGTAA
AGCATTGGGAAATACAATGGAAACGGATTTAATTGCAACTGCATTTTTCT
CGTTTTAGGTTCACTTTGACTTCATAGCCCACACGGAGACTCTAGCGAAG
GACTTAAACATCTTCTTTCGAAACGCTGGCGTCACAGGAAGAGAGAACGT
CTTCCCTCACGTAAAAACACGTCTAGGCAAGAGAAAGATGCTGGATCTTT
ATCGACAAATACCACTTAAAGACATTCAGCGCATTGGAAGGAAGTACGCG
CCGGACTTCGACATGTTTGGCTATTCCTTAGAAGAAACTATTCTTCAGCT
ACTCTCTACCTGACAATGCGTTTATGAAGACATCTTTAAAGACGTTTTAA
GCGTATGATCAAATGCAATAAGATGTACCATACGAATTTTACACTGTTTG
TTGTGACTTATGTGACCGGTGTGCTGTTTTGTCAACTCAAAGCCATTCTG
CTAGAAAAGCAATACGTGTATATTTTCAAAAACAGACAGTATCCTCCCAA
CATGACAATAGCTATTGCGACTGCTTCATGCTTTTGTTTATTCAGATCTA
TTACATGCA Coding sequence (CDS) from alignment at Sc0000007:3168116..3170424- >transcript:BL84154_cuf0 ID=transcript:BL84154_cuf0|Name=transcript:BL84154_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2292bp|location=Sequence derived from alignment at Sc0000007:3168116..3170424- (Branchiostoma lanceolatum)
CTGAAGACTTACAAGAAACTCCTGGTGGTGCGCAATCCACTCGAGAGATT
GGTCTCGGCATACTTATTTTTCTTTGGAGGAAAAGACTACTTCGTTGGAA
AAACGAGACACGTTCTTTACAACAAACATTATCAAGATATGCTGGAAACA
ATCGACTGGAAGATTCCATACACCGAGGACTACGGCGTCATTCAAACTAA
AGATGAAACGTACCATGTCATTCCATTTTTGGCCTTCATAAGAGCTGTAA
CGGAAGACACAGGTAGATGGAAAAATGAACACTGGGCGCTGATGTCTAAC
TATTGCCCACCTTGTCAAGTTCACTTTGACTTCATAGCCCACACGGAGAC
TCTAGCGAAGGACTTAAACATCTTCTTTCGAAACGCTGGCGTCACAGGAA
GAGAGAACGTCTTCCCTCACGTAAAAACACGTCTAGGCAAGAGAAAGATG
CTGGATCTTTATCGACAAATACCACTTAAAGACATTCAGCGCATTGGAAG
GAAGTACGCGCCGGACTTCGACATGTTTGGCTATTCCTTAGAAGAAACTA
TTCTTCAGCTACTCTCTACCTGACTGAAGACTTACAAGAAACTCCTGGTG
GTGCGCAATCCACTCGAGAGATTGGTCTCGGCATACTTATTTTTCTTTGG
AGGAAAAGACTACTTCGTTGGAAAAACGAGACACGTTCTTTACAACAAAC
ATTATCAAGATATGCTGGAAACAATCGACTGGAAGATTCCATACACCGAG
GACTACGGCGTCATTCAAACTAAAGATGAAACGTACCATGTCATTCCATT
TTTGGCCTTCATAAGAGCTGTAACGGAAGACACAGGTAGATGGAAAAATG
AACACTGGGCGCTGATGTCTAACTATTGCCCACCTTGTCAAGTTCACTTT
GACTTCATAGCCCACACGGAGACTCTAGCGAAGGACTTAAACATCTTCTT
TCGAAACGCTGGCGTCACAGGAAGAGAGAACGTCTTCCCTCACGTAAAAA
CACGTCTAGGCAAGAGAAAGATGCTGGATCTTTATCGACAAATACCACTT
AAAGACATTCAGCGCATTGGAAGGAAGTACGCGCCGGACTTCGACATGTT
TGGCTATTCCTTAGAAGAAACTATTCTTCAGCTACTCTCTACCTGACTGA
AGACTTACAAGAAACTCCTGGTGGTGCGCAATCCACTCGAGAGATTGGTC
TCGGCATACTTATTTTTCTTTGGAGGAAAAGACTACTTCGTTGGAAAAAC
GAGACACGTTCTTTACAACAAACATTATCAAGATATGCTGGAAACAATCG
ACTGGAAGATTCCATACACCGAGGACTACGGCGTCATTCAAACTAAAGAT
GAAACGTACCATGTCATTCCATTTTTGGCCTTCATAAGAGCTGTAACGGA
AGACACAGGTAGATGGAAAAATGAACACTGGGCGCTGATGTCTAACTATT
GCCCACCTTGTCAAGTTCACTTTGACTTCATAGCCCACACGGAGACTCTA
GCGAAGGACTTAAACATCTTCTTTCGAAACGCTGGCGTCACAGGAAGAGA
GAACGTCTTCCCTCACGTAAAAACACGTCTAGGCAAGAGAAAGATGCTGG
ATCTTTATCGACAAATACCACTTAAAGACATTCAGCGCATTGGAAGGAAG
TACGCGCCGGACTTCGACATGTTTGGCTATTCCTTAGAAGAAACTATTCT
TCAGCTACTCTCTACCTGACTGAAGACTTACAAGAAACTCCTGGTGGTGC
GCAATCCACTCGAGAGATTGGTCTCGGCATACTTATTTTTCTTTGGAGGA
AAAGACTACTTCGTTGGAAAAACGAGACACGTTCTTTACAACAAACATTA
TCAAGATATGCTGGAAACAATCGACTGGAAGATTCCATACACCGAGGACT
ACGGCGTCATTCAAACTAAAGATGAAACGTACCATGTCATTCCATTTTTG
GCCTTCATAAGAGCTGTAACGGAAGACACAGGTAGATGGAAAAATGAACA
CTGGGCGCTGATGTCTAACTATTGCCCACCTTGTCAAGTTCACTTTGACT
TCATAGCCCACACGGAGACTCTAGCGAAGGACTTAAACATCTTCTTTCGA
AACGCTGGCGTCACAGGAAGAGAGAACGTCTTCCCTCACGTAAAAACACG
TCTAGGCAAGAGAAAGATGCTGGATCTTTATCGACAAATACCACTTAAAG
ACATTCAGCGCATTGGAAGGAAGTACGCGCCGGACTTCGACATGTTTGGC
TATTCCTTAGAAGAAACTATTCTTCAGCTACTCTCTACCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:3168116..3170424 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL84154_cuf0 |
| Biotype | protein_coding |
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